RNA–Protein interactions for RNA: ENST00000536003.5

PAAF1-207, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-207ENST00000536003 CLIC1O00299 241 aa13.48□□□□□ -0.25
PAAF1-207ENST00000536003 NR5A2O00482 541 aa13.48□□□□□ -0.25
PAAF1-207ENST00000536003 POLR3GO15318 223 aaPredicted RBP13.48□□□□□ -0.25
PAAF1-207ENST00000536003 TMCC2O75069 709 aa13.48□□□□□ -0.25
PAAF1-207ENST00000536003 NPIPB7O75200 414 aa13.48□□□□□ -0.25
PAAF1-207ENST00000536003 BMP2P12643 396 aa13.48□□□□□ -0.25
PAAF1-207ENST00000536003 CXCR1P25024 350 aa13.48□□□□□ -0.25
PAAF1-207ENST00000536003 MRPL19P49406 292 aaKnown RBP13.48□□□□□ -0.25
PAAF1-207ENST00000536003 LGALS3BPQ08380 585 aa13.48□□□□□ -0.25
PAAF1-207ENST00000536003 PAGE3Q5JUK9 113 aa13.48□□□□□ -0.25
PAAF1-207ENST00000536003 GPAT4Q86UL3 456 aa13.48□□□□□ -0.25
PAAF1-207ENST00000536003 PIAS4Q8N2W9 510 aaPredicted RBP13.48□□□□□ -0.25
PAAF1-207ENST00000536003 OR9K2Q8NGE7 335 aa13.48□□□□□ -0.25
PAAF1-207ENST00000536003 GTPBP3Q969Y2 492 aaKnown RBP13.48□□□□□ -0.25
PAAF1-207ENST00000536003 TRAF4Q9BUZ4 470 aaPredicted RBP13.48□□□□□ -0.25
PAAF1-207ENST00000536003 SPATA9Q9BWV2 254 aa13.48□□□□□ -0.25
PAAF1-207ENST00000536003 C1QTNF6Q9BXI9 259 aa13.48□□□□□ -0.25
PAAF1-207ENST00000536003 CCDC167Q9P0B6 97 aa13.48□□□□□ -0.25
PAAF1-207ENST00000536003 A0A096LPI6 279 aa13.47□□□□□ -0.25
PAAF1-207ENST00000536003 A0A0G2JPF8 293 aa13.47□□□□□ -0.25
PAAF1-207ENST00000536003 FAM171A2A8MVW0 826 aa13.47□□□□□ -0.25
PAAF1-207ENST00000536003 HNRNPCL2B2RXH8 293 aa13.47□□□□□ -0.25
PAAF1-207ENST00000536003 HNRNPCL3B7ZW38 293 aa13.47□□□□□ -0.25
PAAF1-207ENST00000536003 HNRNPCL1O60812 293 aaKnown RBP13.47□□□□□ -0.25
PAAF1-207ENST00000536003 GPIP06744 558 aa13.47□□□□□ -0.25
PAAF1-207ENST00000536003 HNRNPCL4P0DMR1 293 aa13.47□□□□□ -0.25
PAAF1-207ENST00000536003 NCF2P19878 526 aaPredicted RBP13.47□□□□□ -0.25
PAAF1-207ENST00000536003 PCSK6P29122 969 aa13.47□□□□□ -0.25
PAAF1-207ENST00000536003 ACVR1BP36896 505 aa13.47□□□□□ -0.25
PAAF1-207ENST00000536003 MAP2K6P52564 334 aa13.47□□□□□ -0.25
PAAF1-207ENST00000536003 COPZ1P61923 177 aa13.47□□□□□ -0.25
PAAF1-207ENST00000536003 VEZF1Q14119 521 aa13.47□□□□□ -0.25
PAAF1-207ENST00000536003 LARS2Q15031 903 aaKnown RBP13.47□□□□□ -0.25
PAAF1-207ENST00000536003 CLEC12BQ2HXU8 276 aa13.47□□□□□ -0.25
PAAF1-207ENST00000536003 ZNF311Q5JNZ3 666 aa13.47□□□□□ -0.25
PAAF1-207ENST00000536003 LRIF1Q5T3J3 769 aa13.47□□□□□ -0.25
PAAF1-207ENST00000536003 C1orf140Q5VVS0 124 aa13.47□□□□□ -0.25
PAAF1-207ENST00000536003 BLOC1S3Q6QNY0 202 aa13.47□□□□□ -0.25
PAAF1-207ENST00000536003 DTX2Q86UW9 622 aa13.47□□□□□ -0.25
PAAF1-207ENST00000536003 WDR31Q8NA23 367 aa13.47□□□□□ -0.25
PAAF1-207ENST00000536003 LRRC8CQ8TDW0 803 aa13.47□□□□□ -0.25
PAAF1-207ENST00000536003 TMEM45BQ96B21 275 aa13.47□□□□□ -0.25
PAAF1-207ENST00000536003 ATP6V1G3Q96LB4 118 aa13.47□□□□□ -0.25
PAAF1-207ENST00000536003 MUS81Q96NY9 551 aa13.47□□□□□ -0.25
PAAF1-207ENST00000536003 NAA11Q9BSU3 229 aaPredicted RBP13.47□□□□□ -0.25
PAAF1-207ENST00000536003 PTDSS2Q9BVG9 487 aa13.47□□□□□ -0.25
PAAF1-207ENST00000536003 VAPAQ9P0L0 249 aa13.47□□□□□ -0.25
PAAF1-207ENST00000536003 SEC14L4Q9UDX3 406 aa13.47□□□□□ -0.25
PAAF1-207ENST00000536003 ABCA1O95477 2261 aa13.46□□□□□ -0.25
PAAF1-207ENST00000536003 TRBV5-3A0A0A0MS03 114 aa13.46□□□□□ -0.25
PAAF1-207ENST00000536003 A8MVM7 634 aa13.46□□□□□ -0.25
PAAF1-207ENST00000536003 INAFM1C9JVW0 142 aa13.46□□□□□ -0.25
PAAF1-207ENST00000536003 E7EQL1 145 aa13.46□□□□□ -0.25
PAAF1-207ENST00000536003 RNF223E7ERA6 249 aa13.46□□□□□ -0.25
PAAF1-207ENST00000536003 M0R1B8 84 aa13.46□□□□□ -0.25
PAAF1-207ENST00000536003 CD40P25942 277 aa13.46□□□□□ -0.25
PAAF1-207ENST00000536003 AQP5P55064 265 aa13.46□□□□□ -0.25
PAAF1-207ENST00000536003 STX1BP61266 288 aa13.46□□□□□ -0.25
PAAF1-207ENST00000536003 EGR4Q05215 589 aa13.46□□□□□ -0.25
PAAF1-207ENST00000536003 FADDQ13158 208 aa13.46□□□□□ -0.25
PAAF1-207ENST00000536003 TMEM108Q6UXF1 575 aa13.46□□□□□ -0.25
PAAF1-207ENST00000536003 GOLGA6L1Q8N7Z2 621 aa13.46□□□□□ -0.25
PAAF1-207ENST00000536003 NFKBIDQ8NI38 313 aa13.46□□□□□ -0.25
PAAF1-207ENST00000536003 ALKBH3Q96Q83 286 aaPredicted RBP13.46□□□□□ -0.25
PAAF1-207ENST00000536003 SLCO5A1Q9H2Y9 848 aa13.46□□□□□ -0.25
PAAF1-207ENST00000536003 BCL2L10Q9HD36 194 aa13.46□□□□□ -0.25
PAAF1-207ENST00000536003 THUMPD1Q9NXG2 353 aaKnown RBP13.46□□□□□ -0.25
PAAF1-207ENST00000536003 UPB1Q9UBR1 384 aa13.46□□□□□ -0.25
PAAF1-207ENST00000536003 FTCDNL1E5RQL4 147 aa13.46□□□□□ -0.26
PAAF1-207ENST00000536003 SASH3O75995 380 aa13.46□□□□□ -0.26
PAAF1-207ENST00000536003 TGDSO95455 350 aa13.46□□□□□ -0.26
PAAF1-207ENST00000536003 HTR2AP28223 471 aa13.46□□□□□ -0.26
PAAF1-207ENST00000536003 SELENOPP49908 381 aa13.46□□□□□ -0.26
PAAF1-207ENST00000536003 SLC22A25Q6T423 547 aa13.46□□□□□ -0.26
PAAF1-207ENST00000536003 BBS10Q8TAM1 723 aa13.46□□□□□ -0.26
PAAF1-207ENST00000536003 HTRA1Q92743 480 aa13.46□□□□□ -0.26
PAAF1-207ENST00000536003 SPDL1Q96EA4 605 aa13.46□□□□□ -0.26
PAAF1-207ENST00000536003 DCTN4Q9UJW0 460 aa13.46□□□□□ -0.26
PAAF1-207ENST00000536003 ATRQ13535 2644 aa13.45□□□□□ -0.26
PAAF1-207ENST00000536003 FBN1P35555 2871 aaKnown RBP13.45□□□□□ -0.26
PAAF1-207ENST00000536003 TMEM247A6NEH6 219 aa13.45□□□□□ -0.26
PAAF1-207ENST00000536003 ARAFP10398 606 aa13.45□□□□□ -0.26
PAAF1-207ENST00000536003 CDH2P19022 906 aaPredicted RBP13.45□□□□□ -0.26
PAAF1-207ENST00000536003 GABPB1Q06547 395 aaPredicted RBP13.45□□□□□ -0.26
PAAF1-207ENST00000536003 HIKESHIQ53FT3 197 aa13.45□□□□□ -0.26
PAAF1-207ENST00000536003 PRAMEF8Q5VWM4 474 aa13.45□□□□□ -0.26
PAAF1-207ENST00000536003 PRAMEF7Q5VXH5 474 aa13.45□□□□□ -0.26
PAAF1-207ENST00000536003 OR7E24Q6IFN5 339 aa13.45□□□□□ -0.26
PAAF1-207ENST00000536003 C11orf71Q6IPW1 123 aa13.45□□□□□ -0.26
PAAF1-207ENST00000536003 DNM1P46Q6ZS02 220 aa13.45□□□□□ -0.26
PAAF1-207ENST00000536003 LINGO2Q7L985 606 aa13.45□□□□□ -0.26
PAAF1-207ENST00000536003 AAED1Q7RTV5 226 aa13.45□□□□□ -0.26
PAAF1-207ENST00000536003 PRIMA1Q86XR5 153 aa13.45□□□□□ -0.26
PAAF1-207ENST00000536003 KTI12Q96EK9 354 aaPredicted RBP13.45□□□□□ -0.26
PAAF1-207ENST00000536003 THOC1Q96FV9 657 aaKnown RBP13.45□□□□□ -0.26
PAAF1-207ENST00000536003 TRMT61AQ96FX7 289 aaKnown RBP13.45□□□□□ -0.26
PAAF1-207ENST00000536003 SF3B5Q9BWJ5 86 aaKnown RBP13.45□□□□□ -0.26
PAAF1-207ENST00000536003 PRR14Q9BWN1 585 aa13.45□□□□□ -0.26
PAAF1-207ENST00000536003 ALG2Q9H553 416 aa13.45□□□□□ -0.26
PAAF1-207ENST00000536003 SLC17A5Q9NRA2 495 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms