RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 SELENOFO60613 162 aa12.05□□□□□ -0.48
LDLR-203ENST00000535915 ARL6IP5O75915 188 aa12.05□□□□□ -0.48
LDLR-203ENST00000535915 IGLV3-21P80748 117 aaPredicted RBP12.05□□□□□ -0.48
LDLR-203ENST00000535915 EFR3AQ14156 821 aa12.05□□□□□ -0.48
LDLR-203ENST00000535915 GGTLC2Q14390 218 aa12.05□□□□□ -0.48
LDLR-203ENST00000535915 BICRALQ6AI39 1079 aa12.05□□□□□ -0.48
LDLR-203ENST00000535915 DPY19L2P2Q6ZN68 376 aa12.05□□□□□ -0.48
LDLR-203ENST00000535915 GATSQ8NAP1 163 aa12.05□□□□□ -0.48
LDLR-203ENST00000535915 ICAM5Q9UMF0 924 aa12.05□□□□□ -0.48
LDLR-203ENST00000535915 ZNF337Q9Y3M9 751 aa12.05□□□□□ -0.48
LDLR-203ENST00000535915 CACNG2Q9Y698 323 aa12.05□□□□□ -0.48
LDLR-203ENST00000535915 A0A0B4J203 849 aa12.05□□□□□ -0.48
LDLR-203ENST00000535915 TRAV1-2A0A0B4J238 106 aa12.05□□□□□ -0.48
LDLR-203ENST00000535915 FLRT2O43155 660 aa12.05□□□□□ -0.48
LDLR-203ENST00000535915 SNRPBP14678 240 aaKnown RBP12.05□□□□□ -0.48
LDLR-203ENST00000535915 EDNRAP25101 427 aa12.05□□□□□ -0.48
LDLR-203ENST00000535915 SRP9P49458 86 aaKnown RBP12.05□□□□□ -0.48
LDLR-203ENST00000535915 ERVK-25P63136 954 aa12.05□□□□□ -0.48
LDLR-203ENST00000535915 FAPQ12884 760 aa12.05□□□□□ -0.48
LDLR-203ENST00000535915 CDONQ4KMG0 1287 aa12.05□□□□□ -0.48
LDLR-203ENST00000535915 Q5BKY6 102 aa12.05□□□□□ -0.48
LDLR-203ENST00000535915 RNASE12Q5GAN4 147 aaKnown RBP12.05□□□□□ -0.48
LDLR-203ENST00000535915 LYPD8Q6UX82 237 aa12.05□□□□□ -0.48
LDLR-203ENST00000535915 DNAJC5GQ8N7S2 189 aa12.05□□□□□ -0.48
LDLR-203ENST00000535915 NPEPL1Q8NDH3 523 aa12.05□□□□□ -0.48
LDLR-203ENST00000535915 OR14A16Q8NHC5 309 aa12.05□□□□□ -0.48
LDLR-203ENST00000535915 AKAP1Q92667 903 aaKnown RBP eCLIP12.05□□□□□ -0.488e-10■■■■■ 35.9
LDLR-203ENST00000535915 RASD2Q96D21 266 aa12.05□□□□□ -0.48
LDLR-203ENST00000535915 HSPA12BQ96MM6 686 aa12.05□□□□□ -0.48
LDLR-203ENST00000535915 OR14A2Q96R54 314 aa12.05□□□□□ -0.48
LDLR-203ENST00000535915 PDCD1LG2Q9BQ51 273 aa12.05□□□□□ -0.48
LDLR-203ENST00000535915 SLA2Q9H6Q3 261 aa12.05□□□□□ -0.48
LDLR-203ENST00000535915 BRD7Q9NPI1 651 aa12.05□□□□□ -0.48
LDLR-203ENST00000535915 ACOXLQ9NUZ1 547 aa12.05□□□□□ -0.48
LDLR-203ENST00000535915 TEKT2Q9UIF3 430 aa12.05□□□□□ -0.48
LDLR-203ENST00000535915 MRPS7Q9Y2R9 242 aaKnown RBP12.05□□□□□ -0.48
LDLR-203ENST00000535915 CLDN16Q9Y5I7 305 aa12.05□□□□□ -0.48
LDLR-203ENST00000535915 VCANP13611 3396 aa12.05□□□□□ -0.48
LDLR-203ENST00000535915 BLACEA4D250 179 aa12.04□□□□□ -0.48
LDLR-203ENST00000535915 OR6C68A6NDL8 312 aa12.04□□□□□ -0.48
LDLR-203ENST00000535915 C10orf142B7Z368 130 aa12.04□□□□□ -0.48
LDLR-203ENST00000535915 NSA2O95478 260 aaKnown RBP12.04□□□□□ -0.48
LDLR-203ENST00000535915 ATF1P18846 271 aa12.04□□□□□ -0.48
LDLR-203ENST00000535915 ERP29P30040 261 aaKnown RBP12.04□□□□□ -0.48
LDLR-203ENST00000535915 LTBRP36941 435 aa12.04□□□□□ -0.48
LDLR-203ENST00000535915 PSMB10P40306 273 aa12.04□□□□□ -0.48
LDLR-203ENST00000535915 DIO1P49895 249 aa12.04□□□□□ -0.48
LDLR-203ENST00000535915 RPL22L1Q6P5R6 122 aaKnown RBP12.04□□□□□ -0.48
LDLR-203ENST00000535915 Q6ZS52 159 aa12.04□□□□□ -0.48
LDLR-203ENST00000535915 OR6C4Q8NGE1 309 aa12.04□□□□□ -0.48
LDLR-203ENST00000535915 ZPLD1Q8TCW7 415 aa12.04□□□□□ -0.48
LDLR-203ENST00000535915 C3orf49Q96BT1 292 aa12.04□□□□□ -0.48
LDLR-203ENST00000535915 TCTN2Q96GX1 697 aa12.04□□□□□ -0.48
LDLR-203ENST00000535915 COPS3Q9UNS2 423 aa12.04□□□□□ -0.48
LDLR-203ENST00000535915 CDK2AP1O14519 115 aa12.04□□□□□ -0.48
LDLR-203ENST00000535915 OR7A10O76100 309 aa12.04□□□□□ -0.48
LDLR-203ENST00000535915 EPXP11678 715 aa12.04□□□□□ -0.48
LDLR-203ENST00000535915 SPI1P17947 270 aa12.04□□□□□ -0.48
LDLR-203ENST00000535915 CCR4P51679 360 aa12.04□□□□□ -0.48
LDLR-203ENST00000535915 C19orf57Q0VDD7 668 aa12.04□□□□□ -0.48
LDLR-203ENST00000535915 FUT7Q11130 342 aa12.04□□□□□ -0.48
LDLR-203ENST00000535915 NTRK2Q16620 822 aa12.04□□□□□ -0.48
LDLR-203ENST00000535915 PLA1AQ53H76 456 aa12.04□□□□□ -0.48
LDLR-203ENST00000535915 YIF1BQ5BJH7 314 aa12.04□□□□□ -0.48
LDLR-203ENST00000535915 OR4D9Q8NGE8 314 aa12.04□□□□□ -0.48
LDLR-203ENST00000535915 ADAMTS18Q8TE60 1221 aa12.04□□□□□ -0.48
LDLR-203ENST00000535915 ZFP3Q96NJ6 502 aa12.04□□□□□ -0.48
LDLR-203ENST00000535915 LMF1Q96S06 567 aa12.04□□□□□ -0.48
LDLR-203ENST00000535915 NRIP3Q9NQ35 241 aa12.04□□□□□ -0.48
LDLR-203ENST00000535915 GPR27Q9NS67 375 aa12.04□□□□□ -0.48
LDLR-203ENST00000535915 AK6Q9Y3D8 172 aaKnown RBP12.04□□□□□ -0.48
LDLR-203ENST00000535915 MYO15AQ9UKN7 3530 aa12.04□□□□□ -0.48
LDLR-203ENST00000535915 CACNA1IQ9P0X4 2223 aa12.03□□□□□ -0.48
LDLR-203ENST00000535915 ELOA3DA6NLF2 546 aaPredicted RBP12.03□□□□□ -0.48
LDLR-203ENST00000535915 BLOC1S5-TXNDC5H3BN57 136 aa12.03□□□□□ -0.48
LDLR-203ENST00000535915 CPNE3O75131 537 aaKnown RBP12.03□□□□□ -0.48
LDLR-203ENST00000535915 C1QBP02746 253 aa12.03□□□□□ -0.48
LDLR-203ENST00000535915 ELOA3BQ3SY89 546 aa12.03□□□□□ -0.48
LDLR-203ENST00000535915 LYPD4Q6UWN0 246 aa12.03□□□□□ -0.48
LDLR-203ENST00000535915 C10orf53Q8N6V4 93 aa12.03□□□□□ -0.48
LDLR-203ENST00000535915 ZNF615Q8N8J6 731 aa12.03□□□□□ -0.48
LDLR-203ENST00000535915 ELOA3Q8NG57 546 aa12.03□□□□□ -0.48
LDLR-203ENST00000535915 ZNF578Q96N58 590 aaPredicted RBP12.03□□□□□ -0.48
LDLR-203ENST00000535915 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.03□□□□□ -0.481e-12■□□□□ 9.5
LDLR-203ENST00000535915 SOHLH2Q9NX45 425 aa12.03□□□□□ -0.48
LDLR-203ENST00000535915 ABRACLQ9P1F3 81 aa12.03□□□□□ -0.48
LDLR-203ENST00000535915 NCDNQ9UBB6 729 aa12.03□□□□□ -0.48
LDLR-203ENST00000535915 TRAV6A0A075B6T7 132 aa12.03□□□□□ -0.48
LDLR-203ENST00000535915 A0A1W2PPC4 97 aa12.03□□□□□ -0.48
LDLR-203ENST00000535915 ERVH48-1M5A8F1 160 aa12.03□□□□□ -0.48
LDLR-203ENST00000535915 PSMD9O00233 223 aa12.03□□□□□ -0.48
LDLR-203ENST00000535915 ZNF749O43361 778 aa12.03□□□□□ -0.48
LDLR-203ENST00000535915 PROS1P07225 676 aa12.03□□□□□ -0.48
LDLR-203ENST00000535915 CD3GP09693 182 aa12.03□□□□□ -0.48
LDLR-203ENST00000535915 UCHL1P09936 223 aa12.03□□□□□ -0.48
LDLR-203ENST00000535915 HPGDP15428 266 aa12.03□□□□□ -0.48
LDLR-203ENST00000535915 GRPRP30550 384 aa12.03□□□□□ -0.48
LDLR-203ENST00000535915 EVI2BP34910 448 aa12.03□□□□□ -0.48
LDLR-203ENST00000535915 GZMKP49863 264 aa12.03□□□□□ -0.48
LDLR-203ENST00000535915 PRPS1P60891 318 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms