RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 IGLV4-69A0A075B6H9 119 aa3.02□□□□□ -1.93
PRKDC-205ENST00000535375 G3V4G9 280 aa3.02□□□□□ -1.93
PRKDC-205ENST00000535375 GFYI3L273 518 aa3.02□□□□□ -1.93
PRKDC-205ENST00000535375 KIF2AO00139 706 aaPredicted RBP3.02□□□□□ -1.93
PRKDC-205ENST00000535375 SNX4O95219 450 aa3.02□□□□□ -1.93
PRKDC-205ENST00000535375 PNMTP11086 282 aa3.02□□□□□ -1.93
PRKDC-205ENST00000535375 PCMT1P22061 227 aa3.02□□□□□ -1.93
PRKDC-205ENST00000535375 PBLDP30039 288 aaPredicted RBP3.02□□□□□ -1.93
PRKDC-205ENST00000535375 TAGLN2P37802 199 aaKnown RBP3.02□□□□□ -1.93
PRKDC-205ENST00000535375 AIF1P55008 147 aa3.02□□□□□ -1.93
PRKDC-205ENST00000535375 TNFRSF17Q02223 184 aa3.02□□□□□ -1.93
PRKDC-205ENST00000535375 GGTLC2Q14390 218 aa3.02□□□□□ -1.93
PRKDC-205ENST00000535375 ATL3Q6DD88 541 aa3.02□□□□□ -1.93
PRKDC-205ENST00000535375 CCDC137Q6PK04 289 aaKnown RBP3.02□□□□□ -1.93
PRKDC-205ENST00000535375 PNKDQ8N490 385 aa3.02□□□□□ -1.93
PRKDC-205ENST00000535375 ZNF561Q8N587 486 aa3.02□□□□□ -1.93
PRKDC-205ENST00000535375 CATSPER1Q8NEC5 780 aa3.02□□□□□ -1.93
PRKDC-205ENST00000535375 OR51G1Q8NGK1 321 aa3.02□□□□□ -1.93
PRKDC-205ENST00000535375 OR5D13Q8NGL4 314 aa3.02□□□□□ -1.93
PRKDC-205ENST00000535375 OR8J1Q8NGP2 316 aa3.02□□□□□ -1.93
PRKDC-205ENST00000535375 KIR2DL5BQ8NHK3 375 aa3.02□□□□□ -1.93
PRKDC-205ENST00000535375 PAQR8Q8TEZ7 354 aa3.02□□□□□ -1.93
PRKDC-205ENST00000535375 RPUSD4Q96CM3 377 aaKnown RBP3.02□□□□□ -1.93
PRKDC-205ENST00000535375 NPY6RQ99463 290 aa3.02□□□□□ -1.93
PRKDC-205ENST00000535375 GAL3ST1Q99999 423 aa3.02□□□□□ -1.93
PRKDC-205ENST00000535375 ZNF670Q9BS34 389 aa3.02□□□□□ -1.93
PRKDC-205ENST00000535375 TUBGCP2Q9BSJ2 902 aa3.02□□□□□ -1.93
PRKDC-205ENST00000535375 SPATA16Q9BXB7 569 aa3.02□□□□□ -1.93
PRKDC-205ENST00000535375 PARD6BQ9BYG5 372 aa3.02□□□□□ -1.93
PRKDC-205ENST00000535375 NAT10Q9H0A0 1025 aaKnown RBP3.02□□□□□ -1.93
PRKDC-205ENST00000535375 FN3KRPQ9HA64 309 aa3.02□□□□□ -1.93
PRKDC-205ENST00000535375 WARS2Q9UGM6 360 aaKnown RBP3.02□□□□□ -1.93
PRKDC-205ENST00000535375 PTBP2Q9UKA9 531 aaKnown RBP3.02□□□□□ -1.93
PRKDC-205ENST00000535375 CLEC4AQ9UMR7 237 aa3.02□□□□□ -1.93
PRKDC-205ENST00000535375 RABL2BQ9UNT1 228 aa3.02□□□□□ -1.93
PRKDC-205ENST00000535375 NEUROG3Q9Y4Z2 214 aa3.02□□□□□ -1.93
PRKDC-205ENST00000535375 ALG6Q9Y672 507 aa3.02□□□□□ -1.93
PRKDC-205ENST00000535375 IGLV4-60A0A075B6I1 120 aa3.01□□□□□ -1.93
PRKDC-205ENST00000535375 A0A1W2PQ67 120 aa3.01□□□□□ -1.93
PRKDC-205ENST00000535375 PES1O00541 588 aaKnown RBP3.01□□□□□ -1.93
PRKDC-205ENST00000535375 PRKAB2O43741 272 aa3.01□□□□□ -1.93
PRKDC-205ENST00000535375 MED6O75586 246 aa3.01□□□□□ -1.93
PRKDC-205ENST00000535375 GNA14O95837 355 aa3.01□□□□□ -1.93
PRKDC-205ENST00000535375 P04436 131 aa3.01□□□□□ -1.93
PRKDC-205ENST00000535375 GIPP09681 153 aaPredicted RBP3.01□□□□□ -1.93
PRKDC-205ENST00000535375 ADRB3P13945 408 aa3.01□□□□□ -1.93
PRKDC-205ENST00000535375 CUL1Q13616 776 aa3.01□□□□□ -1.93
PRKDC-205ENST00000535375 SLC15A2Q16348 729 aa3.01□□□□□ -1.93
PRKDC-205ENST00000535375 SLC25A52Q3SY17 297 aa3.01□□□□□ -1.93
PRKDC-205ENST00000535375 RABL6Q3YEC7 729 aaPredicted RBP3.01□□□□□ -1.93
PRKDC-205ENST00000535375 SFT2D3Q587I9 215 aa3.01□□□□□ -1.93
PRKDC-205ENST00000535375 ZFP2Q6ZN57 461 aa3.01□□□□□ -1.93
PRKDC-205ENST00000535375 ACOT7LQ6ZUV0 252 aa3.01□□□□□ -1.93
PRKDC-205ENST00000535375 KIR3DL3Q8N743 410 aa3.01□□□□□ -1.93
PRKDC-205ENST00000535375 BHLHE23Q8NDY6 225 aa3.01□□□□□ -1.93
PRKDC-205ENST00000535375 NPAS2Q99743 824 aa3.01□□□□□ -1.93
PRKDC-205ENST00000535375 PELOQ9BRX2 385 aaKnown RBP3.01□□□□□ -1.93
PRKDC-205ENST00000535375 CAPS2Q9BXY5 557 aa3.01□□□□□ -1.93
PRKDC-205ENST00000535375 RHBGQ9H310 441 aa3.01□□□□□ -1.93
PRKDC-205ENST00000535375 LRRN3Q9H3W5 708 aa3.01□□□□□ -1.93
PRKDC-205ENST00000535375 SLC17A5Q9NRA2 495 aa3.01□□□□□ -1.93
PRKDC-205ENST00000535375 IL36GQ9NZH8 169 aa3.01□□□□□ -1.93
PRKDC-205ENST00000535375 AK6Q9Y3D8 172 aaKnown RBP3.01□□□□□ -1.93
PRKDC-205ENST00000535375 TIMM10BQ9Y5J6 103 aa3.01□□□□□ -1.93
PRKDC-205ENST00000535375 MAD1L1Q9Y6D9 718 aa3.01□□□□□ -1.93
PRKDC-205ENST00000535375 RLFQ13129 1914 aa3.01□□□□□ -1.93
PRKDC-205ENST00000535375 IGLV2-33A0A075B6J2 118 aaPredicted RBP3□□□□□ -1.93
PRKDC-205ENST00000535375 A0A0U1RQS6 177 aa3□□□□□ -1.93
PRKDC-205ENST00000535375 LRP5LA4QPB2 252 aa3□□□□□ -1.93
PRKDC-205ENST00000535375 RS1O15537 224 aa3□□□□□ -1.93
PRKDC-205ENST00000535375 ZNF208O43345 1280 aa3□□□□□ -1.93
PRKDC-205ENST00000535375 FCMRO60667 390 aa3□□□□□ -1.93
PRKDC-205ENST00000535375 B4GALT2O60909 372 aa3□□□□□ -1.93
PRKDC-205ENST00000535375 DBTP11182 482 aaKnown RBP3□□□□□ -1.93
PRKDC-205ENST00000535375 LONP1P36776 959 aaKnown RBP3□□□□□ -1.93
PRKDC-205ENST00000535375 CCT3P49368 545 aaKnown RBP3□□□□□ -1.93
PRKDC-205ENST00000535375 CEBPDP49716 269 aaPredicted RBP3□□□□□ -1.93
PRKDC-205ENST00000535375 CCR6P51684 374 aa3□□□□□ -1.93
PRKDC-205ENST00000535375 HNRNPA3P51991 378 aaKnown RBP3□□□□□ -1.93
PRKDC-205ENST00000535375 EFNB2P52799 333 aa3□□□□□ -1.93
PRKDC-205ENST00000535375 EIF4EBP1Q13541 118 aaPredicted RBP3□□□□□ -1.93
PRKDC-205ENST00000535375 DDX39BQ13838 428 aaKnown RBP3□□□□□ -1.93
PRKDC-205ENST00000535375 TP53I3Q53FA7 332 aa3□□□□□ -1.93
PRKDC-205ENST00000535375 C1orf220Q5T0J3 134 aa3□□□□□ -1.93
PRKDC-205ENST00000535375 CASC10Q5T4H9 136 aa3□□□□□ -1.93
PRKDC-205ENST00000535375 BEND3Q5T5X7 828 aa3□□□□□ -1.93
PRKDC-205ENST00000535375 ZSCAN25Q6NSZ9 544 aa3□□□□□ -1.93
PRKDC-205ENST00000535375 PMF1Q6P1K2 205 aa3□□□□□ -1.93
PRKDC-205ENST00000535375 EFL1Q7Z2Z2 1120 aaKnown RBP3□□□□□ -1.93
PRKDC-205ENST00000535375 SAXO1Q8IYX7 474 aa3□□□□□ -1.93
PRKDC-205ENST00000535375 CLEC4FQ8N1N0 589 aa3□□□□□ -1.93
PRKDC-205ENST00000535375 TRPV1Q8NER1 839 aa3□□□□□ -1.93
PRKDC-205ENST00000535375 OR51G2Q8NGK0 314 aa3□□□□□ -1.93
PRKDC-205ENST00000535375 OR6X1Q8NH79 312 aa3□□□□□ -1.93
PRKDC-205ENST00000535375 RNF185Q96GF1 192 aa3□□□□□ -1.93
PRKDC-205ENST00000535375 FOPNLQ96NB1 174 aa3□□□□□ -1.93
PRKDC-205ENST00000535375 MTMR9Q96QG7 549 aa3□□□□□ -1.93
PRKDC-205ENST00000535375 SLC35A5Q9BS91 424 aa3□□□□□ -1.93
PRKDC-205ENST00000535375 PLA2G2FQ9BZM2 168 aa3□□□□□ -1.93
PRKDC-205ENST00000535375 HYPKQ9NX55 129 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms