RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 ST7LQ8TDW4 575 aa5.47□□□□□ -1.53
CD44-237ENST00000534082 ELP4Q96EB1 424 aa5.47□□□□□ -1.53
CD44-237ENST00000534082 DNAJA3Q96EY1 480 aa5.47□□□□□ -1.53
CD44-237ENST00000534082 SHCBP1LQ9BZQ2 653 aa5.47□□□□□ -1.53
CD44-237ENST00000534082 TRIM5Q9C035 493 aa5.47□□□□□ -1.53
CD44-237ENST00000534082 NOL11Q9H8H0 719 aaKnown RBP5.47□□□□□ -1.53
CD44-237ENST00000534082 MMP26Q9NRE1 261 aa5.47□□□□□ -1.53
CD44-237ENST00000534082 SLC6A13Q9NSD5 602 aa5.47□□□□□ -1.53
CD44-237ENST00000534082 TMEM45AQ9NWC5 275 aa5.47□□□□□ -1.53
CD44-237ENST00000534082 MYEF2Q9P2K5 600 aaKnown RBP5.47□□□□□ -1.53
CD44-237ENST00000534082 HUWE1Q7Z6Z7 4374 aaKnown RBP5.46□□□□□ -1.53
CD44-237ENST00000534082 ARHGAP32A7KAX9 2087 aa5.46□□□□□ -1.53
CD44-237ENST00000534082 TRAV40A0A0B4J280 105 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 GNG14A0A1W2PPG7 69 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 A0A1W2PPW3 197 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 SYCE1LA8MT33 242 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 TRIM49D1C9J1S8 452 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 H0YL77 283 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 DHHO43323 396 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 DNPH1O43598 174 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 TRAF3IP2O43734 574 aaPredicted RBP5.46□□□□□ -1.54
CD44-237ENST00000534082 PIAS1O75925 651 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 KRT33AO76009 404 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 PMS2P2O95744 297 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 PDYNP01213 254 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 IGHMP01871 453 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 MYZAPP0CAP1 466 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 TFPIP10646 304 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 ACP2P11117 423 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 ZNF12P17014 697 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 NTSP30990 170 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 MAP3K8P41279 467 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 CCNG1P51959 295 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 ALDH18A1P54886 795 aaKnown RBP5.46□□□□□ -1.54
CD44-237ENST00000534082 ILF2Q12905 390 aaKnown RBP5.46□□□□□ -1.54
CD44-237ENST00000534082 NPRL3Q12980 569 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 TRAF3Q13114 568 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 DUSP5Q16690 384 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 PRSS53Q2L4Q9 553 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 DEFB112Q30KQ8 113 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 MMEL1Q495T6 779 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 TECRLQ5HYJ1 363 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 CCNJQ5T5M9 372 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 FAM205BPQ63HN1 556 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 LRP11Q86VZ4 500 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 COX18Q8N8Q8 333 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 POMGNT2Q8NAT1 580 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 MAGEE2Q8TD90 523 aaPredicted RBP5.46□□□□□ -1.54
CD44-237ENST00000534082 SLC25A43Q8WUT9 341 aaPredicted RBP5.46□□□□□ -1.54
CD44-237ENST00000534082 SELENOMQ8WWX9 145 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 HOXB13Q92826 284 aaPredicted RBP5.46□□□□□ -1.54
CD44-237ENST00000534082 BCL2L2Q92843 193 aaPredicted RBP5.46□□□□□ -1.54
CD44-237ENST00000534082 RAB1CQ92928 201 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 ATP6V1E2Q96A05 226 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 PHF21AQ96BD5 680 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 LRRC39Q96DD0 335 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 SLC47A1Q96FL8 570 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 OTUB1Q96FW1 271 aaPredicted RBP5.46□□□□□ -1.54
CD44-237ENST00000534082 TIMD4Q96H15 378 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 AMDHD1Q96NU7 426 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 ZNF317Q96PQ6 595 aaPredicted RBP5.46□□□□□ -1.54
CD44-237ENST00000534082 ALKBH3Q96Q83 286 aaPredicted RBP5.46□□□□□ -1.54
CD44-237ENST00000534082 GPR22Q99680 433 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 DESI2Q9BSY9 194 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 NELFAQ9H3P2 528 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 GLIPR2Q9H4G4 154 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 BRF2Q9HAW0 419 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 NMRAL1Q9HBL8 299 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 CRLF2Q9HC73 371 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 SERINC1Q9NRX5 453 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 NMRK1Q9NWW6 199 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 GIN1Q9NXP7 522 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 NSMCE4AQ9NXX6 385 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 UBAP1Q9NZ09 502 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 ZNF346Q9UL40 294 aaKnown RBP5.46□□□□□ -1.54
CD44-237ENST00000534082 FZR1Q9UM11 496 aa5.46□□□□□ -1.54
CD44-237ENST00000534082 STAB2Q8WWQ8 2551 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 A0A096LPK6 155 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 IGHV1-69-2A0A0G2JMI3 117 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 ISPDA4D126 451 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 ZNF587BE7ETH6 402 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 H3BNH8 94 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 C3orf84H3BNL1 204 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 TRAPPC2LH3BP13 241 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 K7EIL1 84 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 GTPBP1O00178 669 aaKnown RBP5.45□□□□□ -1.54
CD44-237ENST00000534082 ULK1O75385 1050 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 PLATP00750 562 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 IFI6P09912 130 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 PRPS2P11908 318 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 BCKDHAP12694 445 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 CBR1P16152 277 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 DDCP20711 480 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 NR4A1P22736 598 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 CRYBB2P43320 205 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 OR2B6P58173 313 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 RPL15P61313 204 aaKnown RBP5.45□□□□□ -1.54
CD44-237ENST00000534082 RAE1P78406 368 aaKnown RBP5.45□□□□□ -1.54
CD44-237ENST00000534082 CCL8P80075 99 aa5.45□□□□□ -1.54
CD44-237ENST00000534082 CD69Q07108 199 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms