RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 WDYHV1Q96HA8 205 aa6.91□□□□□ -1.3
CASP4-212ENST00000533730 GNRHR2Q96P88 292 aa6.91□□□□□ -1.3
CASP4-212ENST00000533730 TRNT1Q96Q11 434 aaKnown RBP6.91□□□□□ -1.3
CASP4-212ENST00000533730 LRRC37BQ96QE4 947 aa6.91□□□□□ -1.3
CASP4-212ENST00000533730 SDF2Q99470 211 aa6.91□□□□□ -1.3
CASP4-212ENST00000533730 NMUR2Q9GZQ4 415 aa6.91□□□□□ -1.3
CASP4-212ENST00000533730 DEFB127Q9H1M4 99 aa6.91□□□□□ -1.3
CASP4-212ENST00000533730 UBQLN3Q9H347 655 aa6.91□□□□□ -1.3
CASP4-212ENST00000533730 EXO5Q9H790 373 aa6.91□□□□□ -1.3
CASP4-212ENST00000533730 TPT1P8Q9HAU6 139 aa6.91□□□□□ -1.3
CASP4-212ENST00000533730 GALNT9Q9HCQ5 603 aa6.91□□□□□ -1.3
CASP4-212ENST00000533730 SLC52A3Q9NQ40 469 aa6.91□□□□□ -1.3
CASP4-212ENST00000533730 ZNF835Q9Y2P0 537 aa6.91□□□□□ -1.3
CASP4-212ENST00000533730 MRPS18CQ9Y3D5 142 aaKnown RBP6.91□□□□□ -1.3
CASP4-212ENST00000533730 GMEB1Q9Y692 573 aa6.91□□□□□ -1.3
CASP4-212ENST00000533730 CAPN7Q9Y6W3 813 aa6.91□□□□□ -1.3
CASP4-212ENST00000533730 EVPLLA8MZ36 301 aa6.9□□□□□ -1.3
CASP4-212ENST00000533730 CLIC1O00299 241 aa6.9□□□□□ -1.3
CASP4-212ENST00000533730 HMGN4O00479 90 aa6.9□□□□□ -1.3
CASP4-212ENST00000533730 UBE2CO00762 179 aa6.9□□□□□ -1.3
CASP4-212ENST00000533730 LDLRAD4O15165 306 aa6.9□□□□□ -1.3
CASP4-212ENST00000533730 SLC19A2O60779 497 aa6.9□□□□□ -1.3
CASP4-212ENST00000533730 TRAPPC6AO75865 159 aa6.9□□□□□ -1.3
CASP4-212ENST00000533730 ANGPTL1O95841 491 aa6.9□□□□□ -1.3
CASP4-212ENST00000533730 HOXD4P09016 255 aaPredicted RBP6.9□□□□□ -1.3
CASP4-212ENST00000533730 INHBBP09529 407 aa6.9□□□□□ -1.3
CASP4-212ENST00000533730 RFPL3SP0C7P2 107 aa6.9□□□□□ -1.3
CASP4-212ENST00000533730 SRD5A2P31213 254 aa6.9□□□□□ -1.3
CASP4-212ENST00000533730 PTGS2P35354 604 aa6.9□□□□□ -1.3
CASP4-212ENST00000533730 DCTP40126 519 aa6.9□□□□□ -1.3
CASP4-212ENST00000533730 CRATP43155 626 aa6.9□□□□□ -1.3
CASP4-212ENST00000533730 DSCR4P56555 118 aaPredicted RBP6.9□□□□□ -1.3
CASP4-212ENST00000533730 DSTNP60981 165 aa6.9□□□□□ -1.3
CASP4-212ENST00000533730 KLF10Q13118 480 aa6.9□□□□□ -1.3
CASP4-212ENST00000533730 STX5Q13190 355 aa6.9□□□□□ -1.3
CASP4-212ENST00000533730 HLXQ14774 488 aaPredicted RBP6.9□□□□□ -1.3
CASP4-212ENST00000533730 SF3B4Q15427 424 aaKnown RBP eCLIP6.9□□□□□ -1.3
CASP4-212ENST00000533730 ZNF141Q15928 474 aa6.9□□□□□ -1.3
CASP4-212ENST00000533730 ZNF630Q2M218 657 aaPredicted RBP6.9□□□□□ -1.3
CASP4-212ENST00000533730 GPAT3Q53EU6 434 aa6.9□□□□□ -1.3
CASP4-212ENST00000533730 CCNJQ5T5M9 372 aa6.9□□□□□ -1.3
CASP4-212ENST00000533730 PRAMEF8Q5VWM4 474 aa6.9□□□□□ -1.3
CASP4-212ENST00000533730 PRAMEF7Q5VXH5 474 aa6.9□□□□□ -1.3
CASP4-212ENST00000533730 LRRC74BQ6ZQY2 392 aa6.9□□□□□ -1.3
CASP4-212ENST00000533730 MARCH3Q86UD3 253 aa6.9□□□□□ -1.3
CASP4-212ENST00000533730 ZNF619Q8N2I2 560 aa6.9□□□□□ -1.3
CASP4-212ENST00000533730 FADS6Q8N9I5 356 aa6.9□□□□□ -1.3
CASP4-212ENST00000533730 WDSUB1Q8N9V3 476 aa6.9□□□□□ -1.3
CASP4-212ENST00000533730 TNIP2Q8NFZ5 429 aa6.9□□□□□ -1.3
CASP4-212ENST00000533730 NEIL3Q8TAT5 605 aa6.9□□□□□ -1.3
CASP4-212ENST00000533730 RAB8BQ92930 207 aa6.9□□□□□ -1.3
CASP4-212ENST00000533730 ROPN1LQ96C74 230 aa6.9□□□□□ -1.3
CASP4-212ENST00000533730 TRMT61AQ96FX7 289 aaKnown RBP6.9□□□□□ -1.3
CASP4-212ENST00000533730 OR2B2Q9GZK3 357 aa6.9□□□□□ -1.3
CASP4-212ENST00000533730 ZNF350Q9GZX5 532 aa6.9□□□□□ -1.3
CASP4-212ENST00000533730 CACYBPQ9HB71 228 aaKnown RBP6.9□□□□□ -1.3
CASP4-212ENST00000533730 MSL2Q9HCI7 577 aa6.9□□□□□ -1.3
CASP4-212ENST00000533730 SAR1AQ9NR31 198 aa6.9□□□□□ -1.3
CASP4-212ENST00000533730 P2RX2Q9UBL9 471 aa6.9□□□□□ -1.3
CASP4-212ENST00000533730 DKKL1Q9UK85 242 aa6.9□□□□□ -1.3
CASP4-212ENST00000533730 OSGIN2Q9Y236 505 aa6.9□□□□□ -1.3
CASP4-212ENST00000533730 WDR45Q9Y484 360 aa6.9□□□□□ -1.3
CASP4-212ENST00000533730 PCDHGB5Q9Y5G0 923 aa6.9□□□□□ -1.3
CASP4-212ENST00000533730 KCNE3Q9Y6H6 103 aa6.9□□□□□ -1.3
CASP4-212ENST00000533730 BOD1L1Q8NFC6 3051 aa6.9□□□□□ -1.3
CASP4-212ENST00000533730 CFAP46Q8IYW2 2715 aa6.9□□□□□ -1.31
CASP4-212ENST00000533730 A0A087WZY1 265 aa6.89□□□□□ -1.31
CASP4-212ENST00000533730 A0A1B0GTH9 108 aa6.89□□□□□ -1.31
CASP4-212ENST00000533730 TEX22C9J3V5 150 aa6.89□□□□□ -1.31
CASP4-212ENST00000533730 NPIPB9F8W1W9 429 aa6.89□□□□□ -1.31
CASP4-212ENST00000533730 ADAM20O43506 726 aa6.89□□□□□ -1.31
CASP4-212ENST00000533730 KIAA0513O60268 411 aa6.89□□□□□ -1.31
CASP4-212ENST00000533730 SNX3O60493 162 aa6.89□□□□□ -1.31
CASP4-212ENST00000533730 EIF4E2O60573 245 aaKnown RBP6.89□□□□□ -1.31
CASP4-212ENST00000533730 ACTL6AO96019 429 aa6.89□□□□□ -1.31
CASP4-212ENST00000533730 ELANEP08246 267 aa6.89□□□□□ -1.31
CASP4-212ENST00000533730 GABRA1P14867 456 aa6.89□□□□□ -1.31
CASP4-212ENST00000533730 HOXB9P17482 250 aaPredicted RBP6.89□□□□□ -1.31
CASP4-212ENST00000533730 DRD4P21917 467 aa6.89□□□□□ -1.31
CASP4-212ENST00000533730 DPP4P27487 766 aa6.89□□□□□ -1.31
CASP4-212ENST00000533730 APOBEC3AP31941 199 aaPredicted RBP6.89□□□□□ -1.31
CASP4-212ENST00000533730 PTGER4P35408 488 aa6.89□□□□□ -1.31
CASP4-212ENST00000533730 CA7P43166 264 aa6.89□□□□□ -1.31
CASP4-212ENST00000533730 UQCRFS1P47985 274 aa6.89□□□□□ -1.31
CASP4-212ENST00000533730 CPA2P48052 419 aa6.89□□□□□ -1.31
CASP4-212ENST00000533730 MVDP53602 400 aa6.89□□□□□ -1.31
CASP4-212ENST00000533730 CRISP3P54108 245 aa6.89□□□□□ -1.31
CASP4-212ENST00000533730 RPS7P62081 194 aaKnown RBP6.89□□□□□ -1.31
CASP4-212ENST00000533730 CBFBQ13951 182 aa6.89□□□□□ -1.31
CASP4-212ENST00000533730 CYLC2Q14093 348 aaPredicted RBP6.89□□□□□ -1.31
CASP4-212ENST00000533730 SCARB2Q14108 478 aa6.89□□□□□ -1.31
CASP4-212ENST00000533730 RGNQ15493 299 aa6.89□□□□□ -1.31
CASP4-212ENST00000533730 ZSWIM7Q19AV6 140 aa6.89□□□□□ -1.31
CASP4-212ENST00000533730 EIF2S3LQ2VIR3 472 aaKnown RBP6.89□□□□□ -1.31
CASP4-212ENST00000533730 MMEL1Q495T6 779 aa6.89□□□□□ -1.31
CASP4-212ENST00000533730 GLYR1Q49A26 553 aaPredicted RBP6.89□□□□□ -1.31
CASP4-212ENST00000533730 KLHL26Q53HC5 615 aa6.89□□□□□ -1.31
CASP4-212ENST00000533730 NHSL2Q5HYW2 709 aa6.89□□□□□ -1.31
CASP4-212ENST00000533730 PAGE3Q5JUK9 113 aa6.89□□□□□ -1.31
CASP4-212ENST00000533730 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms