RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 ZNF702PQ9H963 129 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 ANKRA2Q9H9E1 313 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 GLRX2Q9NS18 164 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 KLHL21Q9UJP4 597 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 COPS3Q9UNS2 423 aa2.2□□□□□ -2.06
CD44-234ENST00000531873 RPL36Q9Y3U8 105 aaKnown RBP2.2□□□□□ -2.06
CD44-234ENST00000531873 A0A075B6Q4 140 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 IGHV1OR21-1A0A087WYE8 117 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 IGHV7-81A0A0B4J1V7 117 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 TCP11X1B4DZS4 312 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 LOC110117498-PIK3R3F6TDL0 507 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 MBTPS2O43462 519 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 CACNG3O60359 315 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 LYPLA1O75608 230 aaPredicted RBP2.19□□□□□ -2.06
CD44-234ENST00000531873 OR7A10O76100 309 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 LGI1O95970 557 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 AGTP01019 485 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 CGAP01215 116 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 KRT14P02533 472 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 KRT6AP02538 564 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 MMP1P03956 469 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 SEMG1P04279 462 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 ASGR1P07306 291 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 P0C879 139 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 CCDC166P0CW27 439 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 SHMT2P34897 504 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 GSSP48637 474 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 KLK7P49862 253 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 KPNA2P52292 529 aaKnown RBP2.19□□□□□ -2.06
CD44-234ENST00000531873 BCL2L1Q07817 233 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 SCRN3Q0VDG4 424 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 CCDC173Q0VFZ6 552 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 RCN1Q15293 331 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 ALKBH6Q3KRA9 238 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 XKR7Q5GH72 579 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 PAGE2BQ5JRK9 111 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 NIPA1Q7RTP0 329 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 ZNF589Q86UQ0 364 aaPredicted RBP2.19□□□□□ -2.06
CD44-234ENST00000531873 PPP1R27Q86WC6 154 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 NUDCD3Q8IVD9 361 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 NRMQ8IXM6 262 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 CCDC65Q8IXS2 484 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 C6orf223Q8N319 242 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 CADM2Q8N3J6 435 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 GTPBP8Q8N3Z3 284 aaPredicted RBP2.19□□□□□ -2.06
CD44-234ENST00000531873 ZNF525Q8N782 197 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 SPATA4Q8NEY3 305 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 OR4F6Q8NGB9 312 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 FGF11Q92914 225 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 PAGE5Q96GU1 130 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 SEC22AQ96IW7 307 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 TECTBQ96PL2 329 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 PANX1Q96RD7 426 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 FAIM2Q9BWQ8 316 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 FAM192AQ9GZU8 254 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 NEUROG2Q9H2A3 272 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 NCOR1P1Q9H4R4 102 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 SUDS3Q9H7L9 328 aaPredicted RBP2.19□□□□□ -2.06
CD44-234ENST00000531873 INPP5EQ9NRR6 644 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 PSMC3IPQ9P2W1 217 aaPredicted RBP2.19□□□□□ -2.06
CD44-234ENST00000531873 ZNF107Q9UII5 783 aaPredicted RBP2.19□□□□□ -2.06
CD44-234ENST00000531873 IKZF2Q9UKS7 526 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 MOKQ9UQ07 419 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 PLEKHH1Q9ULM0 1364 aa2.19□□□□□ -2.06
CD44-234ENST00000531873 IGLV3-22A0A075B6J6 115 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 SERTM2A0A1B0GWG4 89 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 OR5B21A6NL26 309 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 DFNA5O60443 496 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 UGT1A9O60656 530 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 SERF1AO75920 110 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 MCF2P10911 925 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 ANXA8P13928 327 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 IL12AP29459 219 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 FDFT1P37268 417 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 VHLP40337 213 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 SSR1P43307 286 aaKnown RBP2.18□□□□□ -2.06
CD44-234ENST00000531873 PLK1P53350 603 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 CDH6P55285 790 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 RIPPLY3P57055 190 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 RPS8P62241 208 aaKnown RBP2.18□□□□□ -2.06
CD44-234ENST00000531873 ZNF763Q0D2J5 394 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 ARL6IP1Q15041 203 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 PRR30Q53SZ7 412 aaPredicted RBP2.18□□□□□ -2.06
CD44-234ENST00000531873 ANXA8L1Q5VT79 327 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 CARD17Q5XLA6 110 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 C1orf94Q6P1W5 598 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 WDR74Q6RFH5 385 aaPredicted RBP2.18□□□□□ -2.06
CD44-234ENST00000531873 SASS6Q6UVJ0 657 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 BAIAP2L2Q6UXY1 529 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 LRRC31Q6UY01 552 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 MOB1BQ7L9L4 216 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 ASCL5Q7RTU5 278 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 BIVMQ86UB2 503 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 MYPOPQ86VE0 399 aaPredicted RBP2.18□□□□□ -2.06
CD44-234ENST00000531873 VRK2Q86Y07 508 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 CDC20BQ86Y33 519 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 MARCH9Q86YJ5 346 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 APOBEC3FQ8IUX4 373 aaKnown RBP2.18□□□□□ -2.06
CD44-234ENST00000531873 FBXO16Q8IX29 292 aaPredicted RBP2.18□□□□□ -2.06
CD44-234ENST00000531873 PIANPQ8IYJ0 282 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms