RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 POM121L1PQ3SYA9 428 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 CHRFAM7AQ494W8 412 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 LDLRAP1Q5SW96 308 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 LGSNQ5TDP6 509 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 PRAMEF8Q5VWM4 474 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 TCEAL6Q6IPX3 200 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 ANKRD26P1Q6NSI1 321 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 FUT10Q6P4F1 479 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 LRRC8BQ6P9F7 803 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 WASH2PQ6VEQ5 465 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 TMEM182Q6ZP80 229 aaPredicted RBP2.84□□□□□ -1.95
PTPRK-220ENST00000531466 STOX1Q6ZVD7 989 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 SLC35D2Q76EJ3 337 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 C16orf62Q7Z3J2 963 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 NRARPQ7Z6K4 114 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 ERICH1Q86X53 443 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 FAM219AQ8IW50 185 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 BBS7Q8IWZ6 715 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 SELENOHQ8IZQ5 122 aaKnown RBP2.84□□□□□ -1.95
PTPRK-220ENST00000531466 LINC00518Q8N0U6 118 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 LRRC75A-AS1Q8N1F1 130 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 NATD1Q8N6N6 113 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 PQLC3Q8N755 202 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 LRTM2Q8N967 370 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 MLKLQ8NB16 471 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 CLEC1AQ8NC01 280 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 NOA1Q8NC60 698 aaKnown RBP2.84□□□□□ -1.95
PTPRK-220ENST00000531466 OR2D3Q8NGH3 330 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 OR4C15Q8NGM1 316 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 PNPT1Q8TCS8 783 aaKnown RBP2.84□□□□□ -1.95
PTPRK-220ENST00000531466 RASSF5Q8WWW0 418 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 ARNTL2Q8WYA1 636 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 GTF2H4Q92759 462 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 TOP1MTQ969P6 601 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 DNAJC1Q96KC8 554 aaKnown RBP2.84□□□□□ -1.95
PTPRK-220ENST00000531466 GLT1D1Q96MS3 346 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 RNF145Q96MT1 663 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 MCCC1Q96RQ3 725 aaPredicted RBP2.84□□□□□ -1.95
PTPRK-220ENST00000531466 CTRCQ99895 268 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 C7orf50Q9BRJ6 194 aaKnown RBP2.84□□□□□ -1.95
PTPRK-220ENST00000531466 MED10Q9BTT4 135 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 TMEM43Q9BTV4 400 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 GTPBP2Q9BX10 602 aaKnown RBP2.84□□□□□ -1.95
PTPRK-220ENST00000531466 PRRG3Q9BZD7 231 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 STRADBQ9C0K7 418 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 DPEP3Q9H4B8 488 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 TMEM231Q9H6L2 316 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 GEMIN7Q9H840 131 aaKnown RBP2.84□□□□□ -1.95
PTPRK-220ENST00000531466 SRD5A3Q9H8P0 318 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 FOLH1BQ9HBA9 442 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 ZNF160Q9HCG1 818 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 ZFP14Q9HCL3 533 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 ASCL3Q9NQ33 180 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 MS4A12Q9NXJ0 267 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 SLCO1C1Q9NYB5 712 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 CCDC59Q9P031 241 aaKnown RBP2.84□□□□□ -1.95
PTPRK-220ENST00000531466 IFNKQ9P0W0 207 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 RNF14Q9UBS8 474 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 BCAP29Q9UHQ4 241 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 C3orf18Q9UK00 162 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 TBC1D24Q9ULP9 559 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 ERVW-1Q9UQF0 538 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 NIP7Q9Y221 180 aaKnown RBP eCLIP2.84□□□□□ -1.95
PTPRK-220ENST00000531466 FKBP7Q9Y680 259 aa2.84□□□□□ -1.95
PTPRK-220ENST00000531466 MN1Q10571 1320 aaPredicted RBP2.84□□□□□ -1.96
PTPRK-220ENST00000531466 PCDH11XQ9BZA7 1347 aa2.84□□□□□ -1.96
PTPRK-220ENST00000531466 SALL1Q9NSC2 1324 aa2.84□□□□□ -1.96
PTPRK-220ENST00000531466 MRC2Q9UBG0 1479 aa2.84□□□□□ -1.96
PTPRK-220ENST00000531466 ERICH3Q5RHP9 1530 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 NEURL4Q96JN8 1562 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 A0A087WZ39 114 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 SMCO3A2RU48 225 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 FBP2O00757 339 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 BCKDKO14874 412 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 ST8SIA3O43173 380 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 SELENOFO60613 162 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 FCGR3BO75015 233 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 SDC3O75056 442 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 ZNF253O75346 499 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 SAP30O75446 220 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 SUPT3HO75486 399 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 GLCEO94923 617 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 CXCL14O95715 111 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 SNAP29O95721 258 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 MT-ND2P03891 347 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 IFNA16P05015 189 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 COX5BP10606 129 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 PNMTP11086 282 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 ZNF17P17021 662 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 ACKR3P25106 362 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 FDFT1P37268 417 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 P2RY2P41231 377 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 GRIA1P42261 906 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 RPS5P46782 204 aaKnown RBP2.83□□□□□ -1.96
PTPRK-220ENST00000531466 CSNK1EP49674 416 aaKnown RBP2.83□□□□□ -1.96
PTPRK-220ENST00000531466 MTCP1P56278 107 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 UBE2G2P60604 165 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 ATP6V0D1P61421 351 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 PITPNAQ00169 270 aa2.83□□□□□ -1.96
PTPRK-220ENST00000531466 IL9RQ01113 521 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms