RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 MS4A2Q01362 244 aa13.66□□□□□ -0.22
CCS-206ENST00000530961 MFSD13AQ14CX5 517 aa13.66□□□□□ -0.22
CCS-206ENST00000530961 PDK3Q15120 406 aa13.66□□□□□ -0.22
CCS-206ENST00000530961 FAM69AQ5T7M9 428 aa13.66□□□□□ -0.22
CCS-206ENST00000530961 TTC33Q6PID6 262 aaPredicted RBP13.66□□□□□ -0.22
CCS-206ENST00000530961 PAQR6Q6TCH4 344 aa13.66□□□□□ -0.22
CCS-206ENST00000530961 FAM214BQ7L5A3 538 aa13.66□□□□□ -0.22
CCS-206ENST00000530961 GDF7Q7Z4P5 450 aa13.66□□□□□ -0.22
CCS-206ENST00000530961 TSPYL5Q86VY4 417 aaPredicted RBP13.66□□□□□ -0.22
CCS-206ENST00000530961 CCDC124Q96CT7 223 aaKnown RBP13.66□□□□□ -0.22
CCS-206ENST00000530961 LRGUKQ96M69 825 aa13.66□□□□□ -0.22
CCS-206ENST00000530961 HS6ST2Q96MM7 605 aa13.66□□□□□ -0.22
CCS-206ENST00000530961 TACO1Q9BSH4 297 aaKnown RBP13.66□□□□□ -0.22
CCS-206ENST00000530961 ZNF426Q9BUY5 554 aa13.66□□□□□ -0.22
CCS-206ENST00000530961 FNDC11Q9BVV2 318 aa13.66□□□□□ -0.22
CCS-206ENST00000530961 CADM1Q9BY67 442 aaKnown RBP13.66□□□□□ -0.22
CCS-206ENST00000530961 KCNJ16Q9NPI9 418 aa13.66□□□□□ -0.22
CCS-206ENST00000530961 KLHL9Q9P2J3 617 aa13.66□□□□□ -0.22
CCS-206ENST00000530961 A4GNTQ9UNA3 340 aa13.66□□□□□ -0.22
CCS-206ENST00000530961 A0A1W2PNV4 684 aa13.65□□□□□ -0.22
CCS-206ENST00000530961 FTCDNL1E5RQL4 147 aa13.65□□□□□ -0.22
CCS-206ENST00000530961 ACOT8O14734 319 aa13.65□□□□□ -0.22
CCS-206ENST00000530961 SMAD9O15198 467 aaKnown RBP13.65□□□□□ -0.22
CCS-206ENST00000530961 CYTIPO60759 359 aa13.65□□□□□ -0.22
CCS-206ENST00000530961 FZD7O75084 574 aa13.65□□□□□ -0.22
CCS-206ENST00000530961 SS18L1O75177 396 aaPredicted RBP13.65□□□□□ -0.22
CCS-206ENST00000530961 RNF224P0DH78 156 aa13.65□□□□□ -0.22
CCS-206ENST00000530961 RHCEP18577 417 aa13.65□□□□□ -0.22
CCS-206ENST00000530961 BMP5P22003 454 aa13.65□□□□□ -0.22
CCS-206ENST00000530961 FOXF2Q12947 444 aa13.65□□□□□ -0.22
CCS-206ENST00000530961 GUSBP1Q15486 140 aa13.65□□□□□ -0.22
CCS-206ENST00000530961 OR7A5Q15622 319 aa13.65□□□□□ -0.22
CCS-206ENST00000530961 CYP2R1Q6VVX0 501 aa13.65□□□□□ -0.22
CCS-206ENST00000530961 OFCC1Q8IZS5 231 aa13.65□□□□□ -0.22
CCS-206ENST00000530961 GCNT2Q8N0V5 402 aa13.65□□□□□ -0.22
CCS-206ENST00000530961 FAM86B1Q8N7N1 296 aa13.65□□□□□ -0.22
CCS-206ENST00000530961 PIGXQ8TBF5 258 aa13.65□□□□□ -0.22
CCS-206ENST00000530961 NANOS1Q8WY41 292 aaKnown RBP13.65□□□□□ -0.22
CCS-206ENST00000530961 KTI12Q96EK9 354 aaPredicted RBP13.65□□□□□ -0.22
CCS-206ENST00000530961 C7orf34Q96L11 122 aa13.65□□□□□ -0.22
CCS-206ENST00000530961 PRSS27Q9BQR3 290 aa13.65□□□□□ -0.22
CCS-206ENST00000530961 PTDSS2Q9BVG9 487 aa13.65□□□□□ -0.22
CCS-206ENST00000530961 LRMDAQ9H2I8 198 aa13.65□□□□□ -0.22
CCS-206ENST00000530961 PIGMQ9H3S5 423 aa13.65□□□□□ -0.22
CCS-206ENST00000530961 BCO1Q9HAY6 547 aa13.65□□□□□ -0.22
CCS-206ENST00000530961 NDUFAF4Q9P032 175 aa13.65□□□□□ -0.22
CCS-206ENST00000530961 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.65□□□□□ -0.22
CCS-206ENST00000530961 EMC9Q9Y3B6 208 aa13.65□□□□□ -0.22
CCS-206ENST00000530961 KLF2Q9Y5W3 355 aaPredicted RBP13.65□□□□□ -0.22
CCS-206ENST00000530961 IGHV3-15A0A0B4J1V0 119 aa13.64□□□□□ -0.23
CCS-206ENST00000530961 HTR3EA5X5Y0 456 aa13.64□□□□□ -0.23
CCS-206ENST00000530961 TNFSF13O75888 250 aa13.64□□□□□ -0.23
CCS-206ENST00000530961 IGF2P01344 180 aa13.64□□□□□ -0.23
CCS-206ENST00000530961 SEMG1P04279 462 aa13.64□□□□□ -0.23
CCS-206ENST00000530961 YES1P07947 543 aa13.64□□□□□ -0.23
CCS-206ENST00000530961 ATP6V1B2P21281 511 aa13.64□□□□□ -0.23
CCS-206ENST00000530961 GTF2E2P29084 291 aaKnown RBP13.64□□□□□ -0.23
CCS-206ENST00000530961 KIR2DL2P43627 348 aaPredicted RBP13.64□□□□□ -0.23
CCS-206ENST00000530961 RPS5P46782 204 aaKnown RBP13.64□□□□□ -0.23
CCS-206ENST00000530961 YAP1P46937 504 aaKnown RBP13.64□□□□□ -0.23
CCS-206ENST00000530961 CTBP2P56545 445 aa13.64□□□□□ -0.23
CCS-206ENST00000530961 RASGEF1BQ0VAM2 473 aa13.64□□□□□ -0.23
CCS-206ENST00000530961 TMEM201Q5SNT2 666 aa13.64□□□□□ -0.23
CCS-206ENST00000530961 WDR88Q6ZMY6 472 aa13.64□□□□□ -0.23
CCS-206ENST00000530961 LIX1LQ8IVB5 337 aa13.64□□□□□ -0.23
CCS-206ENST00000530961 ABHD3Q8WU67 409 aa13.64□□□□□ -0.23
CCS-206ENST00000530961 TAAR8Q969N4 342 aa13.64□□□□□ -0.23
CCS-206ENST00000530961 ZNF300Q96RE9 604 aaPredicted RBP13.64□□□□□ -0.23
CCS-206ENST00000530961 SF3B5Q9BWJ5 86 aaKnown RBP13.64□□□□□ -0.23
CCS-206ENST00000530961 KLHL4Q9C0H6 718 aa13.64□□□□□ -0.23
CCS-206ENST00000530961 ANKRD19PQ9H560 264 aa13.64□□□□□ -0.23
CCS-206ENST00000530961 MAGIXQ9H6Y5 334 aa13.64□□□□□ -0.23
CCS-206ENST00000530961 IL1RAPQ9NPH3 570 aa13.64□□□□□ -0.23
CCS-206ENST00000530961 KLHL13Q9P2N7 655 aa13.64□□□□□ -0.23
CCS-206ENST00000530961 CORINQ9Y5Q5 1042 aa13.64□□□□□ -0.23
CCS-206ENST00000530961 ESPL1Q14674 2120 aa13.63□□□□□ -0.23
CCS-206ENST00000530961 IGKV3D-15A0A087WSY6 115 aa13.63□□□□□ -0.23
CCS-206ENST00000530961 TCRBV5S2A0A599 114 aa13.63□□□□□ -0.23
CCS-206ENST00000530961 AQP7P3A6NL99 342 aa13.63□□□□□ -0.23
CCS-206ENST00000530961 AQP12BA6NM10 295 aa13.63□□□□□ -0.23
CCS-206ENST00000530961 ZNF724A8MTY0 619 aa13.63□□□□□ -0.23
CCS-206ENST00000530961 J3KTA2 159 aa13.63□□□□□ -0.23
CCS-206ENST00000530961 FFAR1O14842 300 aa13.63□□□□□ -0.23
CCS-206ENST00000530961 VAMP5O95183 116 aa13.63□□□□□ -0.23
CCS-206ENST00000530961 MT-ATP6P00846 226 aa13.63□□□□□ -0.23
CCS-206ENST00000530961 HOXB6P17509 224 aaKnown RBP13.63□□□□□ -0.23
CCS-206ENST00000530961 SLC16A1P53985 500 aa13.63□□□□□ -0.23
CCS-206ENST00000530961 TRAM2Q15035 370 aa13.63□□□□□ -0.23
CCS-206ENST00000530961 OTUD3Q5T2D3 398 aaPredicted RBP13.63□□□□□ -0.23
CCS-206ENST00000530961 ABLIM2Q6H8Q1 611 aa13.63□□□□□ -0.23
CCS-206ENST00000530961 TSEN54Q7Z6J9 526 aaKnown RBP13.63□□□□□ -0.23
CCS-206ENST00000530961 P3H2Q8IVL5 708 aa13.63□□□□□ -0.23
CCS-206ENST00000530961 NKAIN4Q8IVV8 208 aa13.63□□□□□ -0.23
CCS-206ENST00000530961 AQP12AQ8IXF9 295 aa13.63□□□□□ -0.23
CCS-206ENST00000530961 CNEP1R1Q8N9A8 125 aa13.63□□□□□ -0.23
CCS-206ENST00000530961 PIK3C3Q8NEB9 887 aa13.63□□□□□ -0.23
CCS-206ENST00000530961 OR6K3Q8NGY3 331 aa13.63□□□□□ -0.23
CCS-206ENST00000530961 TMEM239Q8WW34 195 aa13.63□□□□□ -0.23
CCS-206ENST00000530961 SLC25A36Q96CQ1 311 aa13.63□□□□□ -0.23
CCS-206ENST00000530961 STARD4Q96DR4 205 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms