RNA–Protein interactions for RNA: ENST00000530695.1

PKP3-207, Transcript of plakophilin 3, humanhuman

TSL 5

Gene PKP3, Length 441 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-207ENST00000530695 ZIM2Q9NZV7 527 aa14.92□□□□□ -0.02
PKP3-207ENST00000530695 ADAM21Q9UKJ8 722 aa14.92□□□□□ -0.02
PKP3-207ENST00000530695 ZNF443Q9Y2A4 671 aaPredicted RBP14.92□□□□□ -0.02
PKP3-207ENST00000530695 ANK3Q12955 4377 aaKnown RBP14.92□□□□□ -0.02
PKP3-207ENST00000530695 TFPTP0C1Z6 253 aa14.91□□□□□ -0.02
PKP3-207ENST00000530695 ZCCHC18P0CG32 403 aa14.91□□□□□ -0.02
PKP3-207ENST00000530695 NUDT6P53370 316 aa14.91□□□□□ -0.02
PKP3-207ENST00000530695 BNIP2Q12982 314 aa14.91□□□□□ -0.02
PKP3-207ENST00000530695 LARS2Q15031 903 aaKnown RBP14.91□□□□□ -0.02
PKP3-207ENST00000530695 RNF220Q5VTB9 566 aa14.91□□□□□ -0.02
PKP3-207ENST00000530695 C11orf71Q6IPW1 123 aa14.91□□□□□ -0.02
PKP3-207ENST00000530695 MSANTD1Q6ZTZ1 278 aa14.91□□□□□ -0.02
PKP3-207ENST00000530695 AAED1Q7RTV5 226 aa14.91□□□□□ -0.02
PKP3-207ENST00000530695 MAVSQ7Z434 540 aa14.91□□□□□ -0.02
PKP3-207ENST00000530695 GPAT4Q86UL3 456 aa14.91□□□□□ -0.02
PKP3-207ENST00000530695 C17orf78Q8N4C9 275 aa14.91□□□□□ -0.02
PKP3-207ENST00000530695 ZIC4Q8N9L1 334 aa14.91□□□□□ -0.02
PKP3-207ENST00000530695 OR9K2Q8NGE7 335 aa14.91□□□□□ -0.02
PKP3-207ENST00000530695 AURKBQ96GD4 344 aaPredicted RBP14.91□□□□□ -0.02
PKP3-207ENST00000530695 MDFIQ99750 246 aa14.91□□□□□ -0.02
PKP3-207ENST00000530695 RHNO1Q9BSD3 238 aa14.91□□□□□ -0.02
PKP3-207ENST00000530695 SF3B5Q9BWJ5 86 aaKnown RBP14.91□□□□□ -0.02
PKP3-207ENST00000530695 CACYBPQ9HB71 228 aaKnown RBP14.91□□□□□ -0.02
PKP3-207ENST00000530695 SLC17A5Q9NRA2 495 aa14.91□□□□□ -0.02
PKP3-207ENST00000530695 SDR39U1Q9NRG7 319 aaPredicted RBP14.91□□□□□ -0.02
PKP3-207ENST00000530695 ADPRHL2Q9NX46 363 aa14.91□□□□□ -0.02
PKP3-207ENST00000530695 PRDM4Q9UKN5 801 aa14.91□□□□□ -0.02
PKP3-207ENST00000530695 AMDHD2Q9Y303 409 aa14.91□□□□□ -0.02
PKP3-207ENST00000530695 TMEM247A6NEH6 219 aa14.9□□□□□ -0.02
PKP3-207ENST00000530695 AQP7P3A6NL99 342 aa14.9□□□□□ -0.02
PKP3-207ENST00000530695 UBDO15205 165 aa14.9□□□□□ -0.02
PKP3-207ENST00000530695 PRG2P13727 222 aa14.9□□□□□ -0.02
PKP3-207ENST00000530695 NCF2P19878 526 aaPredicted RBP14.9□□□□□ -0.02
PKP3-207ENST00000530695 MPGP29372 298 aa14.9□□□□□ -0.02
PKP3-207ENST00000530695 POLR2JP52435 117 aaKnown RBP14.9□□□□□ -0.02
PKP3-207ENST00000530695 MAGOHP61326 146 aaKnown RBP14.9□□□□□ -0.02
PKP3-207ENST00000530695 SLC25A3Q00325 362 aa14.9□□□□□ -0.02
PKP3-207ENST00000530695 ZSWIM7Q19AV6 140 aa14.9□□□□□ -0.02
PKP3-207ENST00000530695 GTDC1Q4AE62 458 aa14.9□□□□□ -0.02
PKP3-207ENST00000530695 RPS26P11Q5JNZ5 115 aaPredicted RBP14.9□□□□□ -0.02
PKP3-207ENST00000530695 C6orf10Q5SRN2 563 aa14.9□□□□□ -0.02
PKP3-207ENST00000530695 TMEM225Q6GV28 225 aa14.9□□□□□ -0.02
PKP3-207ENST00000530695 CLIP4Q8N3C7 705 aa14.9□□□□□ -0.02
PKP3-207ENST00000530695 POMGNT2Q8NAT1 580 aa14.9□□□□□ -0.02
PKP3-207ENST00000530695 OR9I1Q8NGQ6 314 aa14.9□□□□□ -0.02
PKP3-207ENST00000530695 VPS33AQ96AX1 596 aa14.9□□□□□ -0.02
PKP3-207ENST00000530695 TMEM19Q96HH6 336 aa14.9□□□□□ -0.02
PKP3-207ENST00000530695 ZNF385AQ96PM9 386 aaKnown RBP14.9□□□□□ -0.02
PKP3-207ENST00000530695 OR52B2Q96RD2 323 aa14.9□□□□□ -0.02
PKP3-207ENST00000530695 TAPBPLQ9BX59 468 aa14.9□□□□□ -0.02
PKP3-207ENST00000530695 ARMC7Q9H6L4 198 aa14.9□□□□□ -0.02
PKP3-207ENST00000530695 FKRPQ9H9S5 495 aa14.9□□□□□ -0.02
PKP3-207ENST00000530695 THUMPD1Q9NXG2 353 aaKnown RBP14.9□□□□□ -0.02
PKP3-207ENST00000530695 ZNF232Q9UNY5 417 aa14.9□□□□□ -0.02
PKP3-207ENST00000530695 ATP23Q9Y6H3 246 aa14.9□□□□□ -0.02
PKP3-207ENST00000530695 STAB1Q9NY15 2570 aa14.89□□□□□ -0.03
PKP3-207ENST00000530695 A0A0G2JPF8 293 aa14.89□□□□□ -0.03
PKP3-207ENST00000530695 A8MVM7 634 aa14.89□□□□□ -0.03
PKP3-207ENST00000530695 HNRNPCL2B2RXH8 293 aa14.89□□□□□ -0.03
PKP3-207ENST00000530695 HNRNPCL3B7ZW38 293 aa14.89□□□□□ -0.03
PKP3-207ENST00000530695 CD5LO43866 347 aa14.89□□□□□ -0.03
PKP3-207ENST00000530695 HNRNPCL1O60812 293 aaKnown RBP14.89□□□□□ -0.03
PKP3-207ENST00000530695 HNRNPCL4P0DMR1 293 aa14.89□□□□□ -0.03
PKP3-207ENST00000530695 CDH2P19022 906 aaPredicted RBP14.89□□□□□ -0.03
PKP3-207ENST00000530695 PRPS1P60891 318 aa14.89□□□□□ -0.03
PKP3-207ENST00000530695 RAB35Q15286 201 aa14.89□□□□□ -0.03
PKP3-207ENST00000530695 ZNF544Q6NX49 715 aa14.89□□□□□ -0.03
PKP3-207ENST00000530695 KLHL24Q6TFL4 600 aa14.89□□□□□ -0.03
PKP3-207ENST00000530695 PIF1Q9H611 641 aa14.89□□□□□ -0.03
PKP3-207ENST00000530695 CHST2Q9Y4C5 530 aa14.89□□□□□ -0.03
PKP3-207ENST00000530695 IGHV4-30-2A0A087WSY4 118 aa14.88□□□□□ -0.03
PKP3-207ENST00000530695 FAM234BA2RU67 622 aa14.88□□□□□ -0.03
PKP3-207ENST00000530695 TLX2O43763 284 aaPredicted RBP14.88□□□□□ -0.03
PKP3-207ENST00000530695 KRT33AO76009 404 aa14.88□□□□□ -0.03
PKP3-207ENST00000530695 WNT11O96014 354 aa14.88□□□□□ -0.03
PKP3-207ENST00000530695 DSCR9P59020 149 aa14.88□□□□□ -0.03
PKP3-207ENST00000530695 C1QTNF12Q5T7M4 302 aa14.88□□□□□ -0.03
PKP3-207ENST00000530695 C1orf140Q5VVS0 124 aa14.88□□□□□ -0.03
PKP3-207ENST00000530695 CLEC2AQ6UVW9 174 aa14.88□□□□□ -0.03
PKP3-207ENST00000530695 ABHD12BQ7Z5M8 362 aaPredicted RBP14.88□□□□□ -0.03
PKP3-207ENST00000530695 SERPINA11Q86U17 422 aa14.88□□□□□ -0.03
PKP3-207ENST00000530695 MIER2Q8N344 545 aa14.88□□□□□ -0.03
PKP3-207ENST00000530695 HTRA1Q92743 480 aa14.88□□□□□ -0.03
PKP3-207ENST00000530695 TLCD1Q96CP7 247 aa14.88□□□□□ -0.03
PKP3-207ENST00000530695 SPATA9Q9BWV2 254 aa14.88□□□□□ -0.03
PKP3-207ENST00000530695 YAE1D1Q9NRH1 226 aa14.88□□□□□ -0.03
PKP3-207ENST00000530695 IFT52Q9Y366 437 aa14.88□□□□□ -0.03
PKP3-207ENST00000530695 A0A096LPI6 279 aa14.87□□□□□ -0.03
PKP3-207ENST00000530695 KLF11O14901 512 aa14.87□□□□□ -0.03
PKP3-207ENST00000530695 FRS3O43559 492 aa14.87□□□□□ -0.03
PKP3-207ENST00000530695 VAMP5O95183 116 aa14.87□□□□□ -0.03
PKP3-207ENST00000530695 P2RY4P51582 365 aa14.87□□□□□ -0.03
PKP3-207ENST00000530695 RGNQ15493 299 aa14.87□□□□□ -0.03
PKP3-207ENST00000530695 HIKESHIQ53FT3 197 aa14.87□□□□□ -0.03
PKP3-207ENST00000530695 ZNF311Q5JNZ3 666 aa14.87□□□□□ -0.03
PKP3-207ENST00000530695 PRAMEF8Q5VWM4 474 aa14.87□□□□□ -0.03
PKP3-207ENST00000530695 PRAMEF7Q5VXH5 474 aa14.87□□□□□ -0.03
PKP3-207ENST00000530695 CREB3L2Q70SY1 520 aa14.87□□□□□ -0.03
PKP3-207ENST00000530695 OR10H5Q8NGA6 315 aa14.87□□□□□ -0.03
PKP3-207ENST00000530695 GTF2H4Q92759 462 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms