RNA–Protein interactions for RNA: ENST00000530620.5

C11orf54-209, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-209ENST00000530620 TACR3P29371 465 aa9.32□□□□□ -0.92
C11orf54-209ENST00000530620 CHI3L1P36222 383 aaPredicted RBP9.32□□□□□ -0.92
C11orf54-209ENST00000530620 CLK1P49759 484 aaKnown RBP9.32□□□□□ -0.92
C11orf54-209ENST00000530620 POLR2HP52434 150 aaKnown RBP9.32□□□□□ -0.92
C11orf54-209ENST00000530620 DSCR9P59020 149 aa9.32□□□□□ -0.92
C11orf54-209ENST00000530620 VSNL1P62760 191 aa9.32□□□□□ -0.92
C11orf54-209ENST00000530620 KCNJ10P78508 379 aa9.32□□□□□ -0.92
C11orf54-209ENST00000530620 CASP8Q14790 479 aa9.32□□□□□ -0.92
C11orf54-209ENST00000530620 CHI3L2Q15782 390 aa9.32□□□□□ -0.92
C11orf54-209ENST00000530620 SYPL1Q16563 259 aa9.32□□□□□ -0.92
C11orf54-209ENST00000530620 FAM174BQ3ZCQ3 159 aa9.32□□□□□ -0.92
C11orf54-209ENST00000530620 TSPO2Q5TGU0 170 aa9.32□□□□□ -0.92
C11orf54-209ENST00000530620 AP1ARQ63HQ0 302 aa9.32□□□□□ -0.92
C11orf54-209ENST00000530620 ZNF544Q6NX49 715 aa9.32□□□□□ -0.92
C11orf54-209ENST00000530620 RNF130Q86XS8 419 aa9.32□□□□□ -0.92
C11orf54-209ENST00000530620 NUDCD3Q8IVD9 361 aa9.32□□□□□ -0.92
C11orf54-209ENST00000530620 C17orf78Q8N4C9 275 aa9.32□□□□□ -0.92
C11orf54-209ENST00000530620 ANKFN1Q8N957 763 aa9.32□□□□□ -0.92
C11orf54-209ENST00000530620 C1orf162Q8NEQ5 155 aaPredicted RBP9.32□□□□□ -0.92
C11orf54-209ENST00000530620 C10orf105Q8TEF2 133 aa9.32□□□□□ -0.92
C11orf54-209ENST00000530620 TMEM158Q8WZ71 300 aa9.32□□□□□ -0.92
C11orf54-209ENST00000530620 SORT1Q99523 831 aa9.32□□□□□ -0.92
C11orf54-209ENST00000530620 SSBP4Q9BWG4 385 aaPredicted RBP9.32□□□□□ -0.92
C11orf54-209ENST00000530620 C20orf27Q9GZN8 174 aa9.32□□□□□ -0.92
C11orf54-209ENST00000530620 SLC38A1Q9H2H9 487 aa9.32□□□□□ -0.92
C11orf54-209ENST00000530620 TMEM181Q9P2C4 612 aa9.32□□□□□ -0.92
C11orf54-209ENST00000530620 UPB1Q9UBR1 384 aa9.32□□□□□ -0.92
C11orf54-209ENST00000530620 CDC42EP3Q9UKI2 254 aa9.32□□□□□ -0.92
C11orf54-209ENST00000530620 TRAPPC4Q9Y296 219 aa9.32□□□□□ -0.92
C11orf54-209ENST00000530620 SLC9A8Q9Y2E8 581 aa9.32□□□□□ -0.92
C11orf54-209ENST00000530620 TMED7Q9Y3B3 224 aa9.32□□□□□ -0.92
C11orf54-209ENST00000530620 ATP23Q9Y6H3 246 aa9.32□□□□□ -0.92
C11orf54-209ENST00000530620 AGAP5A6NIR3 686 aa9.31□□□□□ -0.92
C11orf54-209ENST00000530620 E9PBE3 544 aa9.31□□□□□ -0.92
C11orf54-209ENST00000530620 ZNF208O43345 1280 aa9.31□□□□□ -0.92
C11orf54-209ENST00000530620 MYZAPP0CAP1 466 aa9.31□□□□□ -0.92
C11orf54-209ENST00000530620 IGHV4-31P0DP07 118 aa9.31□□□□□ -0.92
C11orf54-209ENST00000530620 FKBP2P26885 142 aaKnown RBP9.31□□□□□ -0.92
C11orf54-209ENST00000530620 HTR3AP46098 478 aa9.31□□□□□ -0.92
C11orf54-209ENST00000530620 ABCE1P61221 599 aaKnown RBP9.31□□□□□ -0.92
C11orf54-209ENST00000530620 SLC35A1P78382 337 aa9.31□□□□□ -0.92
C11orf54-209ENST00000530620 SLC17A1Q14916 467 aa9.31□□□□□ -0.92
C11orf54-209ENST00000530620 DPY19L1Q2PZI1 675 aa9.31□□□□□ -0.92
C11orf54-209ENST00000530620 MRPL2Q5T653 305 aaKnown RBP9.31□□□□□ -0.92
C11orf54-209ENST00000530620 ANXA8L1Q5VT79 327 aa9.31□□□□□ -0.92
C11orf54-209ENST00000530620 ARIH2OSQ8N7S6 290 aa9.31□□□□□ -0.92
C11orf54-209ENST00000530620 VPS37AQ8NEZ2 397 aa9.31□□□□□ -0.92
C11orf54-209ENST00000530620 UBASH3BQ8TF42 649 aa9.31□□□□□ -0.92
C11orf54-209ENST00000530620 WDR60Q8WVS4 1066 aa9.31□□□□□ -0.92
C11orf54-209ENST00000530620 DDIT4LQ96D03 193 aa9.31□□□□□ -0.92
C11orf54-209ENST00000530620 TEX37Q96LM6 180 aa9.31□□□□□ -0.92
C11orf54-209ENST00000530620 CCDC115Q96NT0 180 aa9.31□□□□□ -0.92
C11orf54-209ENST00000530620 ROPN1BQ9BZX4 212 aaPredicted RBP9.31□□□□□ -0.92
C11orf54-209ENST00000530620 FKRPQ9H9S5 495 aa9.31□□□□□ -0.92
C11orf54-209ENST00000530620 ROPN1Q9HAT0 212 aaPredicted RBP9.31□□□□□ -0.92
C11orf54-209ENST00000530620 AMDHD2Q9Y303 409 aa9.31□□□□□ -0.92
C11orf54-209ENST00000530620 RAP2CQ9Y3L5 183 aa9.31□□□□□ -0.92
C11orf54-209ENST00000530620 FAAHO00519 579 aa9.3□□□□□ -0.92
C11orf54-209ENST00000530620 EIF1BO60739 113 aaKnown RBP9.3□□□□□ -0.92
C11orf54-209ENST00000530620 CSF3P09919 207 aa9.3□□□□□ -0.92
C11orf54-209ENST00000530620 ALDOCP09972 364 aaKnown RBP9.3□□□□□ -0.92
C11orf54-209ENST00000530620 LBPP18428 481 aa9.3□□□□□ -0.92
C11orf54-209ENST00000530620 CDH2P19022 906 aaPredicted RBP9.3□□□□□ -0.92
C11orf54-209ENST00000530620 RPS4Y1P22090 263 aaKnown RBP9.3□□□□□ -0.92
C11orf54-209ENST00000530620 APOBEC3AP31941 199 aaPredicted RBP9.3□□□□□ -0.92
C11orf54-209ENST00000530620 S100A3P33764 101 aa9.3□□□□□ -0.92
C11orf54-209ENST00000530620 CDKN2CP42773 168 aa9.3□□□□□ -0.92
C11orf54-209ENST00000530620 SLC1A3P43003 542 aa9.3□□□□□ -0.92
C11orf54-209ENST00000530620 EFNA4P52798 201 aa9.3□□□□□ -0.92
C11orf54-209ENST00000530620 CLNS1AP54105 237 aaKnown RBP9.3□□□□□ -0.92
C11orf54-209ENST00000530620 NME5P56597 212 aa9.3□□□□□ -0.92
C11orf54-209ENST00000530620 CHRNB3Q05901 458 aa9.3□□□□□ -0.92
C11orf54-209ENST00000530620 EPS8Q12929 822 aa9.3□□□□□ -0.92
C11orf54-209ENST00000530620 HIKESHIQ53FT3 197 aa9.3□□□□□ -0.92
C11orf54-209ENST00000530620 OTUD3Q5T2D3 398 aaPredicted RBP9.3□□□□□ -0.92
C11orf54-209ENST00000530620 PAQR6Q6TCH4 344 aa9.3□□□□□ -0.92
C11orf54-209ENST00000530620 Q6ZS46 218 aa9.3□□□□□ -0.92
C11orf54-209ENST00000530620 CMIPQ8IY22 773 aa9.3□□□□□ -0.92
C11orf54-209ENST00000530620 ZIC4Q8N9L1 334 aa9.3□□□□□ -0.92
C11orf54-209ENST00000530620 OR9K2Q8NGE7 335 aa9.3□□□□□ -0.92
C11orf54-209ENST00000530620 PNPT1Q8TCS8 783 aaKnown RBP9.3□□□□□ -0.92
C11orf54-209ENST00000530620 AENQ8WTP8 325 aaKnown RBP9.3□□□□□ -0.92
C11orf54-209ENST00000530620 PMM1Q92871 262 aa9.3□□□□□ -0.92
C11orf54-209ENST00000530620 TMEM45BQ96B21 275 aa9.3□□□□□ -0.92
C11orf54-209ENST00000530620 MEGF10Q96KG7 1140 aa9.3□□□□□ -0.92
C11orf54-209ENST00000530620 ZNF385AQ96PM9 386 aaKnown RBP9.3□□□□□ -0.92
C11orf54-209ENST00000530620 SORCS2Q96PQ0 1159 aa9.3□□□□□ -0.92
C11orf54-209ENST00000530620 TRNT1Q96Q11 434 aaKnown RBP9.3□□□□□ -0.92
C11orf54-209ENST00000530620 NAA11Q9BSU3 229 aaPredicted RBP9.3□□□□□ -0.92
C11orf54-209ENST00000530620 NUF2Q9BZD4 464 aa9.3□□□□□ -0.92
C11orf54-209ENST00000530620 PARPBPQ9NWS1 579 aa9.3□□□□□ -0.92
C11orf54-209ENST00000530620 TMEM160Q9NX00 188 aa9.3□□□□□ -0.92
C11orf54-209ENST00000530620 BTNL2Q9UIR0 455 aa9.3□□□□□ -0.92
C11orf54-209ENST00000530620 MOKQ9UQ07 419 aa9.3□□□□□ -0.92
C11orf54-209ENST00000530620 TMEM238LA0A1B0GVL6 79 aa9.29□□□□□ -0.92
C11orf54-209ENST00000530620 CFAP73A6NFT4 308 aa9.29□□□□□ -0.92
C11orf54-209ENST00000530620 LIPT2A6NK58 231 aa9.29□□□□□ -0.92
C11orf54-209ENST00000530620 AQP7P3A6NL99 342 aa9.29□□□□□ -0.92
C11orf54-209ENST00000530620 VWC2LB2RUY7 222 aa9.29□□□□□ -0.92
C11orf54-209ENST00000530620 EIF4EBP3O60516 100 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms