RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 ANK2Q01484 3957 aa18.12■□□□□ 0.49
TSPAN4-219ENST00000530404 LIPT2A6NK58 231 aa18.11■□□□□ 0.49
TSPAN4-219ENST00000530404 FAAHO00519 579 aa18.11■□□□□ 0.49
TSPAN4-219ENST00000530404 PGRP06401 933 aa18.11■□□□□ 0.49
TSPAN4-219ENST00000530404 GPIP06744 558 aa18.11■□□□□ 0.49
TSPAN4-219ENST00000530404 DBIP07108 87 aaKnown RBP18.11■□□□□ 0.49
TSPAN4-219ENST00000530404 CXCR1P25024 350 aa18.11■□□□□ 0.49
TSPAN4-219ENST00000530404 TGFBR3Q03167 851 aa18.11■□□□□ 0.49
TSPAN4-219ENST00000530404 CHRNB3Q05901 458 aa18.11■□□□□ 0.49
TSPAN4-219ENST00000530404 BST1Q10588 318 aa18.11■□□□□ 0.49
TSPAN4-219ENST00000530404 OGFOD2Q6N063 350 aa18.11■□□□□ 0.49
TSPAN4-219ENST00000530404 KLHL24Q6TFL4 600 aa18.11■□□□□ 0.49
TSPAN4-219ENST00000530404 IL17RELQ6ZVW7 336 aa18.11■□□□□ 0.49
TSPAN4-219ENST00000530404 TMEM158Q8WZ71 300 aa18.11■□□□□ 0.49
TSPAN4-219ENST00000530404 SORCS2Q96PQ0 1159 aa18.11■□□□□ 0.49
TSPAN4-219ENST00000530404 BEX2Q9BXY8 128 aa18.11■□□□□ 0.49
TSPAN4-219ENST00000530404 KCNK9Q9NPC2 374 aa18.11■□□□□ 0.49
TSPAN4-219ENST00000530404 ADPRHL2Q9NX46 363 aa18.11■□□□□ 0.49
TSPAN4-219ENST00000530404 IGHV1-18A0A0C4DH31 117 aa18.1■□□□□ 0.49
TSPAN4-219ENST00000530404 AQP7P3A6NL99 342 aa18.1■□□□□ 0.49
TSPAN4-219ENST00000530404 TM9SF1O15321 606 aa18.1■□□□□ 0.49
TSPAN4-219ENST00000530404 WNT11O96014 354 aa18.1■□□□□ 0.49
TSPAN4-219ENST00000530404 ANXA11P50995 505 aaKnown RBP18.1■□□□□ 0.49
TSPAN4-219ENST00000530404 TUBA1BP68363 451 aa18.1■□□□□ 0.49
TSPAN4-219ENST00000530404 TUBA4AP68366 448 aa18.1■□□□□ 0.49
TSPAN4-219ENST00000530404 GNA13Q14344 377 aa18.1■□□□□ 0.49
TSPAN4-219ENST00000530404 GGTLC2Q14390 218 aa18.1■□□□□ 0.49
TSPAN4-219ENST00000530404 MST1LQ2TV78 715 aa18.1■□□□□ 0.49
TSPAN4-219ENST00000530404 CYB5R2Q6BCY4 276 aa18.1■□□□□ 0.49
TSPAN4-219ENST00000530404 TUBA1AQ71U36 451 aa18.1■□□□□ 0.49
TSPAN4-219ENST00000530404 PEX5LQ8IYB4 626 aa18.1■□□□□ 0.49
TSPAN4-219ENST00000530404 OR52P1PQ8NH57 321 aa18.1■□□□□ 0.49
TSPAN4-219ENST00000530404 ALKBH3Q96Q83 286 aaPredicted RBP18.1■□□□□ 0.49
TSPAN4-219ENST00000530404 WDR55Q9H6Y2 383 aaPredicted RBP18.1■□□□□ 0.49
TSPAN4-219ENST00000530404 SSU72Q9NP77 194 aaKnown RBP18.1■□□□□ 0.49
TSPAN4-219ENST00000530404 CDHR4A6H8M9 788 aa18.09■□□□□ 0.49
TSPAN4-219ENST00000530404 KRT33AO76009 404 aa18.09■□□□□ 0.49
TSPAN4-219ENST00000530404 LGI1O95970 557 aa18.09■□□□□ 0.49
TSPAN4-219ENST00000530404 F12P00748 615 aaPredicted RBP18.09■□□□□ 0.49
TSPAN4-219ENST00000530404 PRG2P13727 222 aa18.09■□□□□ 0.49
TSPAN4-219ENST00000530404 ETFAP13804 333 aa18.09■□□□□ 0.49
TSPAN4-219ENST00000530404 UQCRBP14927 111 aa18.09■□□□□ 0.49
TSPAN4-219ENST00000530404 USF1P22415 310 aaPredicted RBP18.09■□□□□ 0.49
TSPAN4-219ENST00000530404 EPHA3P29320 983 aa18.09■□□□□ 0.49
TSPAN4-219ENST00000530404 ACAA2P42765 397 aaKnown RBP18.09■□□□□ 0.49
TSPAN4-219ENST00000530404 SELENOPP49908 381 aa18.09■□□□□ 0.49
TSPAN4-219ENST00000530404 P2RY4P51582 365 aa18.09■□□□□ 0.49
TSPAN4-219ENST00000530404 LSM11P83369 360 aaKnown RBP eCLIP18.09■□□□□ 0.49
TSPAN4-219ENST00000530404 SRSF2Q01130 221 aaKnown RBP18.09■□□□□ 0.49
TSPAN4-219ENST00000530404 CARTPTQ16568 116 aa18.09■□□□□ 0.49
TSPAN4-219ENST00000530404 SWI5Q1ZZU3 235 aa18.09■□□□□ 0.49
TSPAN4-219ENST00000530404 RPS26P11Q5JNZ5 115 aaPredicted RBP18.09■□□□□ 0.49
TSPAN4-219ENST00000530404 LINGO2Q7L985 606 aa18.09■□□□□ 0.49
TSPAN4-219ENST00000530404 LRRC34Q8IZ02 419 aa18.09■□□□□ 0.49
TSPAN4-219ENST00000530404 PROX1Q92786 737 aa18.09■□□□□ 0.49
TSPAN4-219ENST00000530404 C3orf49Q96BT1 292 aa18.09■□□□□ 0.49
TSPAN4-219ENST00000530404 CHODLQ9H9P2 273 aa18.09■□□□□ 0.49
TSPAN4-219ENST00000530404 GPR45Q9Y5Y3 372 aa18.09■□□□□ 0.49
TSPAN4-219ENST00000530404 NR5A2O00482 541 aa18.08■□□□□ 0.48
TSPAN4-219ENST00000530404 RFXANKO14593 260 aa18.08■□□□□ 0.48
TSPAN4-219ENST00000530404 FRS3O43559 492 aa18.08■□□□□ 0.48
TSPAN4-219ENST00000530404 BCHEP06276 602 aa18.08■□□□□ 0.48
TSPAN4-219ENST00000530404 CSF3P09919 207 aa18.08■□□□□ 0.48
TSPAN4-219ENST00000530404 KITP10721 976 aa18.08■□□□□ 0.48
TSPAN4-219ENST00000530404 BMP4P12644 408 aa18.08■□□□□ 0.48
TSPAN4-219ENST00000530404 TBRG1Q3YBR2 411 aa18.08■□□□□ 0.48
TSPAN4-219ENST00000530404 GTDC1Q4AE62 458 aa18.08■□□□□ 0.48
TSPAN4-219ENST00000530404 TMEM225Q6GV28 225 aa18.08■□□□□ 0.48
TSPAN4-219ENST00000530404 WDR93Q6P2C0 686 aa18.08■□□□□ 0.48
TSPAN4-219ENST00000530404 VHLLQ6RSH7 139 aa18.08■□□□□ 0.48
TSPAN4-219ENST00000530404 SPATA19Q7Z5L4 167 aa18.08■□□□□ 0.48
TSPAN4-219ENST00000530404 CLIP4Q8N3C7 705 aa18.08■□□□□ 0.48
TSPAN4-219ENST00000530404 MREGQ8N565 214 aa18.08■□□□□ 0.48
TSPAN4-219ENST00000530404 ANKS4BQ8N8V4 417 aa18.08■□□□□ 0.48
TSPAN4-219ENST00000530404 ANKRD42Q8N9B4 389 aa18.08■□□□□ 0.48
TSPAN4-219ENST00000530404 POMGNT2Q8NAT1 580 aa18.08■□□□□ 0.48
TSPAN4-219ENST00000530404 OR1K1Q8NGR3 316 aa18.08■□□□□ 0.48
TSPAN4-219ENST00000530404 SF3B5Q9BWJ5 86 aaKnown RBP18.08■□□□□ 0.48
TSPAN4-219ENST00000530404 TAPBPLQ9BX59 468 aa18.08■□□□□ 0.48
TSPAN4-219ENST00000530404 SHARPINQ9H0F6 387 aa18.08■□□□□ 0.48
TSPAN4-219ENST00000530404 SEC61A2Q9H9S3 476 aa18.08■□□□□ 0.48
TSPAN4-219ENST00000530404 P2RX2Q9UBL9 471 aa18.08■□□□□ 0.48
TSPAN4-219ENST00000530404 ZNF443Q9Y2A4 671 aaPredicted RBP18.08■□□□□ 0.48
TSPAN4-219ENST00000530404 A0A096LPE4 126 aa18.07■□□□□ 0.48
TSPAN4-219ENST00000530404 A0A1W2PPZ6 126 aa18.07■□□□□ 0.48
TSPAN4-219ENST00000530404 SLC35F4A4IF30 521 aa18.07■□□□□ 0.48
TSPAN4-219ENST00000530404 LMX1BO60663 402 aa18.07■□□□□ 0.48
TSPAN4-219ENST00000530404 SNUPNO95149 360 aaKnown RBP18.07■□□□□ 0.48
TSPAN4-219ENST00000530404 IGFBP5P24593 272 aa18.07■□□□□ 0.48
TSPAN4-219ENST00000530404 CRATP43155 626 aa18.07■□□□□ 0.48
TSPAN4-219ENST00000530404 PDLIM4P50479 330 aa18.07■□□□□ 0.48
TSPAN4-219ENST00000530404 MAP2K6P52564 334 aa18.07■□□□□ 0.48
TSPAN4-219ENST00000530404 MVDP53602 400 aa18.07■□□□□ 0.48
TSPAN4-219ENST00000530404 GSTA3Q16772 222 aa18.07■□□□□ 0.48
TSPAN4-219ENST00000530404 LIN52Q52LA3 116 aa18.07■□□□□ 0.48
TSPAN4-219ENST00000530404 WBP2NLQ6ICG8 309 aa18.07■□□□□ 0.48
TSPAN4-219ENST00000530404 NIPAL3Q6P499 406 aa18.07■□□□□ 0.48
TSPAN4-219ENST00000530404 CREB3L2Q70SY1 520 aa18.07■□□□□ 0.48
TSPAN4-219ENST00000530404 ZNF440Q8IYI8 595 aa18.07■□□□□ 0.48
TSPAN4-219ENST00000530404 SLC38A2Q96QD8 506 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms