RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 SLC38A5Q8WUX1 472 aa18.35■□□□□ 0.53
SMPD1-204ENST00000530395 CACNG6Q9BXT2 260 aa18.35■□□□□ 0.53
SMPD1-204ENST00000530395 PIF1Q9H611 641 aa18.35■□□□□ 0.53
SMPD1-204ENST00000530395 SDR39U1Q9NRG7 319 aaPredicted RBP18.35■□□□□ 0.53
SMPD1-204ENST00000530395 ATRQ13535 2644 aa18.35■□□□□ 0.53
SMPD1-204ENST00000530395 AQP7P3A6NL99 342 aa18.34■□□□□ 0.53
SMPD1-204ENST00000530395 A8MVM7 634 aa18.34■□□□□ 0.53
SMPD1-204ENST00000530395 UBDO15205 165 aa18.34■□□□□ 0.53
SMPD1-204ENST00000530395 SSX4O60224 188 aa18.34■□□□□ 0.53
SMPD1-204ENST00000530395 AKR7A3O95154 331 aa18.34■□□□□ 0.53
SMPD1-204ENST00000530395 TFPTP0C1Z6 253 aa18.34■□□□□ 0.53
SMPD1-204ENST00000530395 PTNP21246 168 aa18.34■□□□□ 0.53
SMPD1-204ENST00000530395 MPGP29372 298 aa18.34■□□□□ 0.53
SMPD1-204ENST00000530395 FABP6P51161 128 aa18.34■□□□□ 0.53
SMPD1-204ENST00000530395 POLR2JP52435 117 aaKnown RBP18.34■□□□□ 0.53
SMPD1-204ENST00000530395 NUDT6P53370 316 aa18.34■□□□□ 0.53
SMPD1-204ENST00000530395 AAED1Q7RTV5 226 aa18.34■□□□□ 0.53
SMPD1-204ENST00000530395 ABHD12BQ7Z5M8 362 aaPredicted RBP18.34■□□□□ 0.53
SMPD1-204ENST00000530395 GPAT4Q86UL3 456 aa18.34■□□□□ 0.53
SMPD1-204ENST00000530395 MIER2Q8N344 545 aa18.34■□□□□ 0.53
SMPD1-204ENST00000530395 TMEM99Q8N816 258 aa18.34■□□□□ 0.53
SMPD1-204ENST00000530395 POMGNT2Q8NAT1 580 aa18.34■□□□□ 0.53
SMPD1-204ENST00000530395 RHNO1Q9BSD3 238 aa18.34■□□□□ 0.53
SMPD1-204ENST00000530395 C1QTNF6Q9BXI9 259 aa18.34■□□□□ 0.53
SMPD1-204ENST00000530395 FKRPQ9H9S5 495 aa18.34■□□□□ 0.53
SMPD1-204ENST00000530395 SLC17A5Q9NRA2 495 aa18.34■□□□□ 0.53
SMPD1-204ENST00000530395 A0A096LPI6 279 aa18.33■□□□□ 0.52
SMPD1-204ENST00000530395 A0A0G2JPF8 293 aa18.33■□□□□ 0.52
SMPD1-204ENST00000530395 KIAA1324LA8MWY0 1029 aaPredicted RBP18.33■□□□□ 0.52
SMPD1-204ENST00000530395 HNRNPCL2B2RXH8 293 aa18.33■□□□□ 0.52
SMPD1-204ENST00000530395 HNRNPCL3B7ZW38 293 aa18.33■□□□□ 0.52
SMPD1-204ENST00000530395 HNRNPCL1O60812 293 aaKnown RBP18.33■□□□□ 0.52
SMPD1-204ENST00000530395 CRLF1O75462 422 aa18.33■□□□□ 0.52
SMPD1-204ENST00000530395 WNT11O96014 354 aa18.33■□□□□ 0.52
SMPD1-204ENST00000530395 HNRNPCL4P0DMR1 293 aa18.33■□□□□ 0.52
SMPD1-204ENST00000530395 ACAA2P42765 397 aaKnown RBP18.33■□□□□ 0.52
SMPD1-204ENST00000530395 TMEM225Q6GV28 225 aa18.33■□□□□ 0.52
SMPD1-204ENST00000530395 C11orf71Q6IPW1 123 aa18.33■□□□□ 0.52
SMPD1-204ENST00000530395 ZNF544Q6NX49 715 aa18.33■□□□□ 0.52
SMPD1-204ENST00000530395 WDR31Q8NA23 367 aa18.33■□□□□ 0.52
SMPD1-204ENST00000530395 TMEM19Q96HH6 336 aa18.33■□□□□ 0.52
SMPD1-204ENST00000530395 OR52B2Q96RD2 323 aa18.33■□□□□ 0.52
SMPD1-204ENST00000530395 SPATA9Q9BWV2 254 aa18.33■□□□□ 0.52
SMPD1-204ENST00000530395 RAD21L1Q9H4I0 556 aa18.33■□□□□ 0.52
SMPD1-204ENST00000530395 ADPRHL2Q9NX46 363 aa18.33■□□□□ 0.52
SMPD1-204ENST00000530395 IFT52Q9Y366 437 aa18.33■□□□□ 0.52
SMPD1-204ENST00000530395 TLX2O43763 284 aaPredicted RBP18.32■□□□□ 0.52
SMPD1-204ENST00000530395 ERLIN1O75477 346 aa18.32■□□□□ 0.52
SMPD1-204ENST00000530395 KRT33AO76009 404 aa18.32■□□□□ 0.52
SMPD1-204ENST00000530395 VAMP5O95183 116 aa18.32■□□□□ 0.52
SMPD1-204ENST00000530395 BMP4P12644 408 aa18.32■□□□□ 0.52
SMPD1-204ENST00000530395 DSCR9P59020 149 aa18.32■□□□□ 0.52
SMPD1-204ENST00000530395 PRPS1P60891 318 aa18.32■□□□□ 0.52
SMPD1-204ENST00000530395 IRX1P78414 480 aaPredicted RBP18.32■□□□□ 0.52
SMPD1-204ENST00000530395 GTDC1Q4AE62 458 aa18.32■□□□□ 0.52
SMPD1-204ENST00000530395 RPS26P11Q5JNZ5 115 aaPredicted RBP18.32■□□□□ 0.52
SMPD1-204ENST00000530395 CLEC2AQ6UVW9 174 aa18.32■□□□□ 0.52
SMPD1-204ENST00000530395 B3GLCTQ6Y288 498 aa18.32■□□□□ 0.52
SMPD1-204ENST00000530395 MAVSQ7Z434 540 aa18.32■□□□□ 0.52
SMPD1-204ENST00000530395 LSRQ86X29 649 aaPredicted RBP18.32■□□□□ 0.52
SMPD1-204ENST00000530395 OR9I1Q8NGQ6 314 aa18.32■□□□□ 0.52
SMPD1-204ENST00000530395 VPS33AQ96AX1 596 aa18.32■□□□□ 0.52
SMPD1-204ENST00000530395 AURKBQ96GD4 344 aaPredicted RBP18.32■□□□□ 0.52
SMPD1-204ENST00000530395 ZNF385AQ96PM9 386 aaKnown RBP18.32■□□□□ 0.52
SMPD1-204ENST00000530395 ATP23Q9Y6H3 246 aa18.32■□□□□ 0.52
SMPD1-204ENST00000530395 COL6A5A8TX70 2615 aa18.32■□□□□ 0.52
SMPD1-204ENST00000530395 KLF11O14901 512 aa18.31■□□□□ 0.52
SMPD1-204ENST00000530395 FRS3O43559 492 aa18.31■□□□□ 0.52
SMPD1-204ENST00000530395 CD5LO43866 347 aa18.31■□□□□ 0.52
SMPD1-204ENST00000530395 BNIP2Q12982 314 aa18.31■□□□□ 0.52
SMPD1-204ENST00000530395 RAB35Q15286 201 aa18.31■□□□□ 0.52
SMPD1-204ENST00000530395 C1orf140Q5VVS0 124 aa18.31■□□□□ 0.52
SMPD1-204ENST00000530395 CLIP4Q8N3C7 705 aa18.31■□□□□ 0.52
SMPD1-204ENST00000530395 ZIC4Q8N9L1 334 aa18.31■□□□□ 0.52
SMPD1-204ENST00000530395 TLCD1Q96CP7 247 aa18.31■□□□□ 0.52
SMPD1-204ENST00000530395 ALPK2Q86TB3 2170 aa18.31■□□□□ 0.52
SMPD1-204ENST00000530395 MXRA5Q9NR99 2828 aa18.31■□□□□ 0.52
SMPD1-204ENST00000530395 OR6C65A6NJZ3 312 aa18.3■□□□□ 0.52
SMPD1-204ENST00000530395 AHSA1O95433 338 aa18.3■□□□□ 0.52
SMPD1-204ENST00000530395 PRG2P13727 222 aa18.3■□□□□ 0.52
SMPD1-204ENST00000530395 CDH2P19022 906 aaPredicted RBP18.3■□□□□ 0.52
SMPD1-204ENST00000530395 STX1BP61266 288 aa18.3■□□□□ 0.52
SMPD1-204ENST00000530395 SLC25A3Q00325 362 aa18.3■□□□□ 0.52
SMPD1-204ENST00000530395 CHRNB3Q05901 458 aa18.3■□□□□ 0.52
SMPD1-204ENST00000530395 FADDQ13158 208 aa18.3■□□□□ 0.52
SMPD1-204ENST00000530395 ZNF311Q5JNZ3 666 aa18.3■□□□□ 0.52
SMPD1-204ENST00000530395 PRAMEF8Q5VWM4 474 aa18.3■□□□□ 0.52
SMPD1-204ENST00000530395 PRAMEF7Q5VXH5 474 aa18.3■□□□□ 0.52
SMPD1-204ENST00000530395 SERPINA11Q86U17 422 aa18.3■□□□□ 0.52
SMPD1-204ENST00000530395 STK35Q8TDR2 534 aa18.3■□□□□ 0.52
SMPD1-204ENST00000530395 C3orf49Q96BT1 292 aa18.3■□□□□ 0.52
SMPD1-204ENST00000530395 TMBIM4Q9HC24 238 aa18.3■□□□□ 0.52
SMPD1-204ENST00000530395 A4GALTQ9NPC4 353 aa18.3■□□□□ 0.52
SMPD1-204ENST00000530395 OBP2BQ9NPH6 170 aa18.3■□□□□ 0.52
SMPD1-204ENST00000530395 ADAM21Q9UKJ8 722 aa18.3■□□□□ 0.52
SMPD1-204ENST00000530395 RASD1Q9Y272 281 aa18.3■□□□□ 0.52
SMPD1-204ENST00000530395 C5orf58C9J3I9 102 aa18.29■□□□□ 0.52
SMPD1-204ENST00000530395 ZNF587BE7ETH6 402 aa18.29■□□□□ 0.52
SMPD1-204ENST00000530395 H7C417 338 aa18.29■□□□□ 0.52
SMPD1-204ENST00000530395 GTF2E2P29084 291 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms