RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 TPD52L3Q96J77 140 aa9.05□□□□□ -0.96
VPS28-204ENST00000526054 OR5B2Q96R09 309 aa9.05□□□□□ -0.96
VPS28-204ENST00000526054 MCHR1Q99705 422 aa9.05□□□□□ -0.96
VPS28-204ENST00000526054 SMR3AQ99954 134 aa9.05□□□□□ -0.96
VPS28-204ENST00000526054 RSPO3Q9BXY4 272 aaPredicted RBP9.05□□□□□ -0.96
VPS28-204ENST00000526054 ADAM19Q9H013 955 aa9.05□□□□□ -0.96
VPS28-204ENST00000526054 C1orf21Q9H246 121 aa9.05□□□□□ -0.96
VPS28-204ENST00000526054 COQ10BQ9H8M1 238 aa9.05□□□□□ -0.96
VPS28-204ENST00000526054 C12orf10Q9HB07 376 aa9.05□□□□□ -0.96
VPS28-204ENST00000526054 C6orf203Q9P0P8 240 aaPredicted RBP9.05□□□□□ -0.96
VPS28-204ENST00000526054 EGFL7Q9UHF1 273 aa9.05□□□□□ -0.96
VPS28-204ENST00000526054 MAGEL2Q9UJ55 1249 aa9.05□□□□□ -0.96
VPS28-204ENST00000526054 RPS6KA6Q9UK32 745 aa9.05□□□□□ -0.96
VPS28-204ENST00000526054 HDGFL3Q9Y3E1 203 aa9.05□□□□□ -0.96
VPS28-204ENST00000526054 A0A1B0GWA3 101 aa9.04□□□□□ -0.96
VPS28-204ENST00000526054 A0A1W2PNR3 127 aa9.04□□□□□ -0.96
VPS28-204ENST00000526054 DNPH1O43598 174 aa9.04□□□□□ -0.96
VPS28-204ENST00000526054 ZNF682O95780 498 aa9.04□□□□□ -0.96
VPS28-204ENST00000526054 CRHP06850 196 aa9.04□□□□□ -0.96
VPS28-204ENST00000526054 T-ENOLP0DO92 83 aa9.04□□□□□ -0.96
VPS28-204ENST00000526054 PNMTP11086 282 aa9.04□□□□□ -0.96
VPS28-204ENST00000526054 NCK1P16333 377 aa9.04□□□□□ -0.96
VPS28-204ENST00000526054 TCN1P20061 433 aaPredicted RBP9.04□□□□□ -0.96
VPS28-204ENST00000526054 HTR2AP28223 471 aa9.04□□□□□ -0.96
VPS28-204ENST00000526054 RAC3P60763 192 aa9.04□□□□□ -0.96
VPS28-204ENST00000526054 SELENOWP63302 87 aa9.04□□□□□ -0.96
VPS28-204ENST00000526054 SIRPAP78324 504 aa9.04□□□□□ -0.96
VPS28-204ENST00000526054 LTBQ06643 244 aa9.04□□□□□ -0.96
VPS28-204ENST00000526054 BNIP2Q12982 314 aa9.04□□□□□ -0.96
VPS28-204ENST00000526054 OR1Q1Q15612 314 aa9.04□□□□□ -0.96
VPS28-204ENST00000526054 DNAL1Q4LDG9 190 aa9.04□□□□□ -0.96
VPS28-204ENST00000526054 ALG10BQ5I7T1 473 aa9.04□□□□□ -0.96
VPS28-204ENST00000526054 Q5PR19 223 aa9.04□□□□□ -0.96
VPS28-204ENST00000526054 SWT1Q5T5J6 900 aaKnown RBP9.04□□□□□ -0.96
VPS28-204ENST00000526054 SHEQ5VZ18 495 aa9.04□□□□□ -0.96
VPS28-204ENST00000526054 GLYATQ6IB77 296 aa9.04□□□□□ -0.96
VPS28-204ENST00000526054 VWA1Q6PCB0 445 aa9.04□□□□□ -0.96
VPS28-204ENST00000526054 ZNF613Q6PF04 617 aa9.04□□□□□ -0.96
VPS28-204ENST00000526054 ULK3Q6PHR2 472 aa9.04□□□□□ -0.96
VPS28-204ENST00000526054 RINLQ6ZS11 566 aa9.04□□□□□ -0.96
VPS28-204ENST00000526054 Q71RC1 249 aaPredicted RBP9.04□□□□□ -0.96
VPS28-204ENST00000526054 ATG4DQ86TL0 474 aaPredicted RBP9.04□□□□□ -0.96
VPS28-204ENST00000526054 CXorf67Q86X51 503 aaPredicted RBP9.04□□□□□ -0.96
VPS28-204ENST00000526054 P3H2Q8IVL5 708 aa9.04□□□□□ -0.96
VPS28-204ENST00000526054 OR6T1Q8NGN1 323 aa9.04□□□□□ -0.96
VPS28-204ENST00000526054 FNDC9Q8TBE3 224 aa9.04□□□□□ -0.96
VPS28-204ENST00000526054 RNF217Q8TC41 542 aa9.04□□□□□ -0.96
VPS28-204ENST00000526054 OSTF1Q92882 214 aa9.04□□□□□ -0.96
VPS28-204ENST00000526054 ZHX1-C8orf76Q96EF9 292 aa9.04□□□□□ -0.96
VPS28-204ENST00000526054 SLC47A1Q96FL8 570 aa9.04□□□□□ -0.96
VPS28-204ENST00000526054 MED18Q9BUE0 208 aa9.04□□□□□ -0.96
VPS28-204ENST00000526054 ZNF226Q9NYT6 803 aa9.04□□□□□ -0.96
VPS28-204ENST00000526054 PRPF19Q9UMS4 504 aaKnown RBP9.04□□□□□ -0.96
VPS28-204ENST00000526054 SAMD4AQ9UPU9 718 aaKnown RBP9.04□□□□□ -0.96
VPS28-204ENST00000526054 SH3GLB1Q9Y371 365 aa9.04□□□□□ -0.96
VPS28-204ENST00000526054 ABCA2Q9BZC7 2435 aa9.03□□□□□ -0.96
VPS28-204ENST00000526054 A0A0B4J2E0 115 aa9.03□□□□□ -0.96
VPS28-204ENST00000526054 A0A1B0GX12 115 aa9.03□□□□□ -0.96
VPS28-204ENST00000526054 CPSF4LA6NMK7 179 aaKnown RBP9.03□□□□□ -0.96
VPS28-204ENST00000526054 A8MVM7 634 aa9.03□□□□□ -0.96
VPS28-204ENST00000526054 TMEM229AB2RXF0 380 aa9.03□□□□□ -0.96
VPS28-204ENST00000526054 SULT2B1O00204 365 aa9.03□□□□□ -0.96
VPS28-204ENST00000526054 ARHGEF9O43307 516 aa9.03□□□□□ -0.96
VPS28-204ENST00000526054 SMPD2O60906 423 aa9.03□□□□□ -0.96
VPS28-204ENST00000526054 AHSA1O95433 338 aa9.03□□□□□ -0.96
VPS28-204ENST00000526054 PMS2P2O95744 297 aa9.03□□□□□ -0.96
VPS28-204ENST00000526054 SERPINA1P01009 418 aa9.03□□□□□ -0.96
VPS28-204ENST00000526054 CCKARP32238 428 aa9.03□□□□□ -0.96
VPS28-204ENST00000526054 IFNA8P32881 189 aa9.03□□□□□ -0.96
VPS28-204ENST00000526054 IDUAP35475 653 aa9.03□□□□□ -0.96
VPS28-204ENST00000526054 CD79BP40259 229 aa9.03□□□□□ -0.96
VPS28-204ENST00000526054 DIO1P49895 249 aa9.03□□□□□ -0.96
VPS28-204ENST00000526054 FAM27E3Q08E93 113 aa9.03□□□□□ -0.96
VPS28-204ENST00000526054 NPTX1Q15818 432 aa9.03□□□□□ -0.96
VPS28-204ENST00000526054 FXNQ16595 210 aa9.03□□□□□ -0.96
VPS28-204ENST00000526054 ZNF239Q16600 458 aaKnown RBP9.03□□□□□ -0.96
VPS28-204ENST00000526054 IFI44LQ53G44 452 aa9.03□□□□□ -0.96
VPS28-204ENST00000526054 ENTPD8Q5MY95 495 aa9.03□□□□□ -0.96
VPS28-204ENST00000526054 GTF2IRD2BQ6EKJ0 949 aa9.03□□□□□ -0.96
VPS28-204ENST00000526054 C5orf46Q6UWT4 87 aa9.03□□□□□ -0.96
VPS28-204ENST00000526054 CLEC9AQ6UXN8 241 aa9.03□□□□□ -0.96
VPS28-204ENST00000526054 DEF8Q6ZN54 512 aa9.03□□□□□ -0.96
VPS28-204ENST00000526054 TMPPEQ6ZT21 453 aa9.03□□□□□ -0.96
VPS28-204ENST00000526054 CBLL1Q75N03 491 aa9.03□□□□□ -0.96
VPS28-204ENST00000526054 GTF2IRD2Q86UP8 949 aa9.03□□□□□ -0.96
VPS28-204ENST00000526054 FAM156AQ8NDB6 213 aa9.03□□□□□ -0.96
VPS28-204ENST00000526054 STK35Q8TDR2 534 aa9.03□□□□□ -0.96
VPS28-204ENST00000526054 GEMIN6Q8WXD5 167 aaKnown RBP9.03□□□□□ -0.96
VPS28-204ENST00000526054 STARD4Q96DR4 205 aa9.03□□□□□ -0.96
VPS28-204ENST00000526054 PIK3IP1Q96FE7 263 aa9.03□□□□□ -0.96
VPS28-204ENST00000526054 HSH2DQ96JZ2 352 aa9.03□□□□□ -0.96
VPS28-204ENST00000526054 NSMCE2Q96MF7 247 aa9.03□□□□□ -0.96
VPS28-204ENST00000526054 SRXN1Q9BYN0 137 aa9.03□□□□□ -0.96
VPS28-204ENST00000526054 POTEKPQ9BYX7 375 aa9.03□□□□□ -0.96
VPS28-204ENST00000526054 OR11A1Q9GZK7 315 aa9.03□□□□□ -0.96
VPS28-204ENST00000526054 POLR2J2Q9GZM3 115 aaKnown RBP9.03□□□□□ -0.96
VPS28-204ENST00000526054 PCDHAC1Q9H158 963 aa9.03□□□□□ -0.96
VPS28-204ENST00000526054 POLR2J3Q9H1A7 115 aaKnown RBP9.03□□□□□ -0.96
VPS28-204ENST00000526054 OPN3Q9H1Y3 402 aaPredicted RBP9.03□□□□□ -0.96
VPS28-204ENST00000526054 LRMDAQ9H2I8 198 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms