RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 CDKN1BP46527 198 aa3.47□□□□□ -1.85
CSDE1-211ENST00000525970 YAP1P46937 504 aaKnown RBP3.47□□□□□ -1.85
CSDE1-211ENST00000525970 KPNA2P52292 529 aaKnown RBP3.47□□□□□ -1.85
CSDE1-211ENST00000525970 ACLYP53396 1101 aa3.47□□□□□ -1.85
CSDE1-211ENST00000525970 RGS8P57771 180 aaPredicted RBP3.47□□□□□ -1.85
CSDE1-211ENST00000525970 EIF3EP60228 445 aaKnown RBP3.47□□□□□ -1.85
CSDE1-211ENST00000525970 OR5I1Q13606 314 aa3.47□□□□□ -1.85
CSDE1-211ENST00000525970 RUNX3Q13761 415 aa3.47□□□□□ -1.85
CSDE1-211ENST00000525970 GNMTQ14749 295 aa3.47□□□□□ -1.85
CSDE1-211ENST00000525970 PRR4Q16378 134 aa3.47□□□□□ -1.85
CSDE1-211ENST00000525970 HADHQ16836 314 aaKnown RBP3.47□□□□□ -1.85
CSDE1-211ENST00000525970 LCE3CQ5T5A8 94 aa3.47□□□□□ -1.85
CSDE1-211ENST00000525970 METTL11BQ5VVY1 283 aa3.47□□□□□ -1.85
CSDE1-211ENST00000525970 OR52E8Q6IFG1 317 aa3.47□□□□□ -1.85
CSDE1-211ENST00000525970 CXCL17Q6UXB2 119 aa3.47□□□□□ -1.85
CSDE1-211ENST00000525970 PGAP1Q75T13 922 aa3.47□□□□□ -1.85
CSDE1-211ENST00000525970 ERI1Q8IV48 349 aaKnown RBP3.47□□□□□ -1.85
CSDE1-211ENST00000525970 NUDCD3Q8IVD9 361 aa3.47□□□□□ -1.85
CSDE1-211ENST00000525970 KATNAL2Q8IYT4 538 aa3.47□□□□□ -1.85
CSDE1-211ENST00000525970 FAM184AQ8NB25 1140 aa3.47□□□□□ -1.85
CSDE1-211ENST00000525970 MAPK1IP1LQ8NDC0 245 aa3.47□□□□□ -1.85
CSDE1-211ENST00000525970 CCDC26Q8TAB7 109 aa3.47□□□□□ -1.85
CSDE1-211ENST00000525970 PLPPR1Q8TBJ4 325 aa3.47□□□□□ -1.85
CSDE1-211ENST00000525970 MS4A14Q96JA4 679 aa3.47□□□□□ -1.85
CSDE1-211ENST00000525970 NOL4LQ96MY1 436 aaPredicted RBP3.47□□□□□ -1.85
CSDE1-211ENST00000525970 P2RY13Q9BPV8 354 aa3.47□□□□□ -1.85
CSDE1-211ENST00000525970 UBXN6Q9BZV1 441 aa3.47□□□□□ -1.85
CSDE1-211ENST00000525970 OR1A1Q9P1Q5 309 aa3.47□□□□□ -1.85
CSDE1-211ENST00000525970 DPM3Q9P2X0 92 aa3.47□□□□□ -1.85
CSDE1-211ENST00000525970 COPS3Q9UNS2 423 aa3.47□□□□□ -1.85
CSDE1-211ENST00000525970 IGKV1D-8A0A087WSZ0 117 aa3.46□□□□□ -1.86
CSDE1-211ENST00000525970 E9PQ18 207 aa3.46□□□□□ -1.86
CSDE1-211ENST00000525970 SPECC1L-ADORA2AF8WAN1 911 aa3.46□□□□□ -1.86
CSDE1-211ENST00000525970 AKR7A2O43488 359 aa3.46□□□□□ -1.86
CSDE1-211ENST00000525970 HCRTR1O43613 425 aa3.46□□□□□ -1.86
CSDE1-211ENST00000525970 SH3BGRLO75368 114 aa3.46□□□□□ -1.86
CSDE1-211ENST00000525970 DUSP14O95147 198 aaKnown RBP3.46□□□□□ -1.86
CSDE1-211ENST00000525970 STAMBPO95630 424 aa3.46□□□□□ -1.86
CSDE1-211ENST00000525970 OXSR1O95747 527 aaPredicted RBP3.46□□□□□ -1.86
CSDE1-211ENST00000525970 IGHV3-13P01766 116 aa3.46□□□□□ -1.86
CSDE1-211ENST00000525970 SLC35E2P0CK97 266 aa3.46□□□□□ -1.86
CSDE1-211ENST00000525970 GATA1P15976 413 aaPredicted RBP3.46□□□□□ -1.86
CSDE1-211ENST00000525970 ATP5C1P36542 298 aaKnown RBP3.46□□□□□ -1.86
CSDE1-211ENST00000525970 RPS5P46782 204 aaKnown RBP3.46□□□□□ -1.86
CSDE1-211ENST00000525970 CSNK1EP49674 416 aaKnown RBP3.46□□□□□ -1.86
CSDE1-211ENST00000525970 CHRNB3Q05901 458 aa3.46□□□□□ -1.86
CSDE1-211ENST00000525970 MRPL23Q16540 153 aaKnown RBP3.46□□□□□ -1.86
CSDE1-211ENST00000525970 KLHL40Q2TBA0 621 aa3.46□□□□□ -1.86
CSDE1-211ENST00000525970 KLF17Q5JT82 389 aaPredicted RBP3.46□□□□□ -1.86
CSDE1-211ENST00000525970 PIP5KL1Q5T9C9 394 aa3.46□□□□□ -1.86
CSDE1-211ENST00000525970 SLC22A10Q63ZE4 541 aa3.46□□□□□ -1.86
CSDE1-211ENST00000525970 OR5M10Q6IEU7 315 aa3.46□□□□□ -1.86
CSDE1-211ENST00000525970 CENPQQ7L2Z9 268 aaPredicted RBP3.46□□□□□ -1.86
CSDE1-211ENST00000525970 NIPA1Q7RTP0 329 aa3.46□□□□□ -1.86
CSDE1-211ENST00000525970 GTSCR1Q86UQ5 136 aa3.46□□□□□ -1.86
CSDE1-211ENST00000525970 SKA3Q8IX90 412 aa3.46□□□□□ -1.86
CSDE1-211ENST00000525970 CCDC65Q8IXS2 484 aa3.46□□□□□ -1.86
CSDE1-211ENST00000525970 ZNF440Q8IYI8 595 aa3.46□□□□□ -1.86
CSDE1-211ENST00000525970 FBXL16Q8N461 479 aa3.46□□□□□ -1.86
CSDE1-211ENST00000525970 ISG20Q96AZ6 181 aaKnown RBP3.46□□□□□ -1.86
CSDE1-211ENST00000525970 SEC22AQ96IW7 307 aa3.46□□□□□ -1.86
CSDE1-211ENST00000525970 ZNF578Q96N58 590 aaPredicted RBP3.46□□□□□ -1.86
CSDE1-211ENST00000525970 PSMB7Q99436 277 aa3.46□□□□□ -1.86
CSDE1-211ENST00000525970 C20orf24Q9BUV8 137 aa3.46□□□□□ -1.86
CSDE1-211ENST00000525970 DNTTIP1Q9H147 329 aa3.46□□□□□ -1.86
CSDE1-211ENST00000525970 RBKSQ9H477 322 aa3.46□□□□□ -1.86
CSDE1-211ENST00000525970 MRPS30Q9NP92 439 aaKnown RBP3.46□□□□□ -1.86
CSDE1-211ENST00000525970 MIEF1Q9NQG6 463 aa3.46□□□□□ -1.86
CSDE1-211ENST00000525970 THUMPD1Q9NXG2 353 aaKnown RBP3.46□□□□□ -1.86
CSDE1-211ENST00000525970 PEF1Q9UBV8 284 aaKnown RBP3.46□□□□□ -1.86
CSDE1-211ENST00000525970 PITPNC1Q9UKF7 332 aa3.46□□□□□ -1.86
CSDE1-211ENST00000525970 TBC1D24Q9ULP9 559 aa3.46□□□□□ -1.86
CSDE1-211ENST00000525970 KCNIP3Q9Y2W7 256 aa3.46□□□□□ -1.86
CSDE1-211ENST00000525970 RPL36Q9Y3U8 105 aaKnown RBP3.46□□□□□ -1.86
CSDE1-211ENST00000525970 PLEKHH1Q9ULM0 1364 aa3.46□□□□□ -1.86
CSDE1-211ENST00000525970 ARPC4-TTLL3A0A0A6YYG9 625 aa3.45□□□□□ -1.86
CSDE1-211ENST00000525970 OR5B21A6NL26 309 aa3.45□□□□□ -1.86
CSDE1-211ENST00000525970 SRRM5B3KS81 715 aa3.45□□□□□ -1.86
CSDE1-211ENST00000525970 HIP1O00291 1037 aa3.45□□□□□ -1.86
CSDE1-211ENST00000525970 CLOCKO15516 846 aa3.45□□□□□ -1.86
CSDE1-211ENST00000525970 PI15O43692 258 aa3.45□□□□□ -1.86
CSDE1-211ENST00000525970 TSPAN13O95857 204 aa3.45□□□□□ -1.86
CSDE1-211ENST00000525970 FOLR2P14207 255 aa3.45□□□□□ -1.86
CSDE1-211ENST00000525970 CCNB1P14635 433 aa3.45□□□□□ -1.86
CSDE1-211ENST00000525970 IL12AP29459 219 aa3.45□□□□□ -1.86
CSDE1-211ENST00000525970 EPHX2P34913 555 aa3.45□□□□□ -1.86
CSDE1-211ENST00000525970 RDXP35241 583 aaKnown RBP3.45□□□□□ -1.86
CSDE1-211ENST00000525970 MAGEA1P43355 309 aa3.45□□□□□ -1.86
CSDE1-211ENST00000525970 SLC11A1P49279 550 aa3.45□□□□□ -1.86
CSDE1-211ENST00000525970 PKNOX1P55347 436 aa3.45□□□□□ -1.86
CSDE1-211ENST00000525970 CXCL6P80162 114 aa3.45□□□□□ -1.86
CSDE1-211ENST00000525970 SLC1A5Q15758 541 aa3.45□□□□□ -1.86
CSDE1-211ENST00000525970 NSUN5P1Q3KNT7 163 aa3.45□□□□□ -1.86
CSDE1-211ENST00000525970 VPS26BQ4G0F5 336 aa3.45□□□□□ -1.86
CSDE1-211ENST00000525970 PAN3Q58A45 887 aaKnown RBP3.45□□□□□ -1.86
CSDE1-211ENST00000525970 TMEM53Q6P2H8 277 aa3.45□□□□□ -1.86
CSDE1-211ENST00000525970 METTL7BQ6UX53 244 aa3.45□□□□□ -1.86
CSDE1-211ENST00000525970 ACOT7LQ6ZUV0 252 aa3.45□□□□□ -1.86
CSDE1-211ENST00000525970 VRK2Q86Y07 508 aa3.45□□□□□ -1.86
CSDE1-211ENST00000525970 NAXDQ8IW45 347 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms