RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 H1FXQ92522 213 aaKnown RBP12.8□□□□□ -0.36
LRRK1-202ENST00000525284 MCTS1Q9ULC4 181 aaKnown RBP12.8□□□□□ -0.36
LRRK1-202ENST00000525284 PAFAH1B3Q15102 231 aaKnown RBP12.8□□□□□ -0.36
LRRK1-202ENST00000525284 IRF4Q15306 451 aa12.8□□□□□ -0.36
LRRK1-202ENST00000525284 ZNF761Q86XN6 746 aaPredicted RBP12.8□□□□□ -0.36
LRRK1-202ENST00000525284 FOXJ1Q92949 421 aa12.8□□□□□ -0.36
LRRK1-202ENST00000525284 LPAR4Q99677 370 aa12.8□□□□□ -0.36
LRRK1-202ENST00000525284 NUDT22Q9BRQ3 303 aa12.8□□□□□ -0.36
LRRK1-202ENST00000525284 ELOVL3Q9HB03 270 aa12.8□□□□□ -0.36
LRRK1-202ENST00000525284 AGLP35573 1532 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 PMP2P02689 132 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 HSD17B7P56937 341 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 SLC6A19Q695T7 634 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 TCHHQ07283 1943 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 NME2P1O60361 137 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 DOK2O60496 412 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 SOCS5O75159 536 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 CNIH1O95406 144 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 ZNF728P0DKX0 622 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 SNRPBP14678 240 aaKnown RBP12.79□□□□□ -0.36
LRRK1-202ENST00000525284 TMEM268Q5VZI3 342 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 CATSPERDQ86XM0 798 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 THNSL2Q86YJ6 484 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 LMNTD1Q8N9Z9 388 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 ZNF768Q9H5H4 540 aaKnown RBP12.79□□□□□ -0.36
LRRK1-202ENST00000525284 BOLA1Q9Y3E2 137 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 FAM183AA6NL82 134 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 UGDHO60701 494 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 SMPD1P17405 629 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 POU3F2P20265 443 aaPredicted RBP12.79□□□□□ -0.36
LRRK1-202ENST00000525284 CDC34P49427 236 aaPredicted RBP12.79□□□□□ -0.36
LRRK1-202ENST00000525284 GALNT2Q10471 571 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 KEAP1Q14145 624 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 NRARPQ7Z6K4 114 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 C4orf32Q8N8J7 132 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 BORCS6Q96GS4 357 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 MVB12BQ9H7P6 319 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 C1GALT1Q9NS00 363 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 SPATA6Q9NWH7 488 aaPredicted RBP12.79□□□□□ -0.36
LRRK1-202ENST00000525284 LEFTY2O00292 366 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 PEX10O60683 326 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 YIF1AO95070 293 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 HOXC5Q00444 222 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 GPR18Q14330 331 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 GTDC1Q4AE62 458 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 LY6G5CQ5SRR4 150 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 OR52B6Q8NGF0 335 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 SLCO2A1Q92959 643 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 CTDSP1Q9GZU7 261 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 TAF9BQ9HBM6 251 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 H7BYZ3 331 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 GABRPO00591 440 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 MTCP1P56278 107 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 UBE2IP63279 158 aaKnown RBP12.79□□□□□ -0.36
LRRK1-202ENST00000525284 SLC25A11Q02978 314 aaKnown RBP12.79□□□□□ -0.36
LRRK1-202ENST00000525284 GPR176Q14439 515 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 SPCS2Q15005 226 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 CEBPEQ15744 281 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 HAGHQ16775 308 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 GLYR1Q49A26 553 aaPredicted RBP12.79□□□□□ -0.36
LRRK1-202ENST00000525284 ACTBL2Q562R1 376 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 UNC5DQ6UXZ4 953 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 NLRC3Q7RTR2 1065 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 SIAH1Q8IUQ4 282 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 RAB3CQ96E17 227 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 SMOC2Q9H3U7 446 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 GABRQQ9UN88 632 aa12.79□□□□□ -0.36
LRRK1-202ENST00000525284 DBX1A6NMT0 343 aa12.78□□□□□ -0.36
LRRK1-202ENST00000525284 NME1P15531 152 aaKnown RBP12.78□□□□□ -0.36
LRRK1-202ENST00000525284 EPHA5P54756 1037 aa12.78□□□□□ -0.36
LRRK1-202ENST00000525284 CDKN2DP55273 166 aa12.78□□□□□ -0.36
LRRK1-202ENST00000525284 PCK2Q16822 640 aa12.78□□□□□ -0.36
LRRK1-202ENST00000525284 ZNF805Q5CZA5 627 aa12.78□□□□□ -0.36
LRRK1-202ENST00000525284 SLC35F3Q8IY50 421 aa12.78□□□□□ -0.36
LRRK1-202ENST00000525284 DCAF4L2Q8NA75 395 aa12.78□□□□□ -0.36
LRRK1-202ENST00000525284 DVL3Q92997 716 aaPredicted RBP12.78□□□□□ -0.36
LRRK1-202ENST00000525284 GPR174Q9BXC1 333 aa12.78□□□□□ -0.36
LRRK1-202ENST00000525284 ANKRD60Q9BZ19 345 aa12.78□□□□□ -0.36
LRRK1-202ENST00000525284 CEPT1Q9Y6K0 416 aa12.78□□□□□ -0.36
LRRK1-202ENST00000525284 RIMBP3CA6NJZ7 1639 aa12.78□□□□□ -0.36
LRRK1-202ENST00000525284 RIMBP3BA6NNM3 1639 aa12.78□□□□□ -0.36
LRRK1-202ENST00000525284 RIMBP3Q9UFD9 1639 aa12.78□□□□□ -0.36
LRRK1-202ENST00000525284 CTDSP2O14595 271 aa12.78□□□□□ -0.36
LRRK1-202ENST00000525284 PHOX2AO14813 284 aa12.78□□□□□ -0.36
LRRK1-202ENST00000525284 RAB40ALP0C0E4 278 aa12.78□□□□□ -0.36
LRRK1-202ENST00000525284 RAC1P63000 192 aa12.78□□□□□ -0.36
LRRK1-202ENST00000525284 RAB40BQ12829 278 aa12.78□□□□□ -0.36
LRRK1-202ENST00000525284 SCCPDHQ8NBX0 429 aa12.78□□□□□ -0.36
LRRK1-202ENST00000525284 OR5D18Q8NGL1 313 aa12.78□□□□□ -0.36
LRRK1-202ENST00000525284 RAB40AQ8WXH6 277 aa12.78□□□□□ -0.36
LRRK1-202ENST00000525284 SIX2Q9NPC8 291 aa12.78□□□□□ -0.36
LRRK1-202ENST00000525284 SLC2A9Q9NRM0 540 aa12.78□□□□□ -0.36
LRRK1-202ENST00000525284 DCTN6O00399 190 aa12.78□□□□□ -0.36
LRRK1-202ENST00000525284 GPR39O43194 453 aa12.78□□□□□ -0.36
LRRK1-202ENST00000525284 RNGTTO60942 597 aaKnown RBP12.78□□□□□ -0.36
LRRK1-202ENST00000525284 SORBS2O94875 1100 aaKnown RBP12.78□□□□□ -0.36
LRRK1-202ENST00000525284 GDNFP39905 211 aa12.78□□□□□ -0.36
LRRK1-202ENST00000525284 RPS5P46782 204 aaKnown RBP12.78□□□□□ -0.36
LRRK1-202ENST00000525284 SELENOWP63302 87 aa12.78□□□□□ -0.36
LRRK1-202ENST00000525284 FABP9Q0Z7S8 132 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms