RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 LMO7DNF2Z398 122 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 F5H6K3 240 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 J3KR12 359 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 GOSR2O14653 212 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 PRMT5O14744 637 aaPredicted RBP3.95□□□□□ -1.78
CD44-213ENST00000525209 P2RX6O15547 441 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 PSTPIP1O43586 416 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 IDH3BO43837 385 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 LYPLA2O95372 231 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 CA1P00915 261 aaPredicted RBP3.95□□□□□ -1.78
CD44-213ENST00000525209 MMP1P03956 469 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 KLK1P06870 262 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 SNRPAP09012 282 aaKnown RBP3.95□□□□□ -1.78
CD44-213ENST00000525209 OCM2P0CE71 109 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 GP1BBP13224 206 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 POLR2EP19388 210 aaKnown RBP3.95□□□□□ -1.78
CD44-213ENST00000525209 CFPP27918 469 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 COILP38432 576 aaPredicted RBP3.95□□□□□ -1.78
CD44-213ENST00000525209 BDKRB1P46663 353 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 GNPDA1P46926 289 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 ALDH3B2P48448 385 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 GLUD2P49448 558 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 PDX1P52945 283 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 NTHL1P78549 312 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 ZXDAP98168 799 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 TAF10Q12962 218 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 VGLL4Q14135 290 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 DUOXA1Q1HG43 343 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 TMEM249Q2WGJ8 235 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 Q4G0T1 1027 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 CEP85LQ5SZL2 805 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 LRRC31Q6UY01 552 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 NAPRTQ6XQN6 538 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 LINC00336Q6ZUF6 198 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 OR2W3Q7Z3T1 314 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 LIMS2Q7Z4I7 341 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 TMEM25Q86YD3 366 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 LINC00518Q8N0U6 118 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 GBGT1Q8N5D6 347 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 KLHDC1Q8N7A1 406 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 PRR26Q8N8Z3 221 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 CCDC71LQ8N9Z2 235 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 ZNF738Q8NE65 137 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 OR5T2Q8NGG2 359 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 OR6Q1Q8NGQ2 317 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 OR1B1Q8NGR6 318 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 ACTL9Q8TC94 416 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 GPR148Q8TDV2 347 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 SMAP2Q8WU79 429 aaPredicted RBP3.95□□□□□ -1.78
CD44-213ENST00000525209 PHF10Q8WUB8 498 aaKnown RBP3.95□□□□□ -1.78
CD44-213ENST00000525209 UBE2E3Q969T4 207 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 APH1AQ96BI3 265 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 KCNA7Q96RP8 456 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 CDCA3Q99618 268 aaPredicted RBP3.95□□□□□ -1.78
CD44-213ENST00000525209 MACROD1Q9BQ69 325 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 TIMM29Q9BSF4 260 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 FEM1AQ9BSK4 669 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 POLDIP3Q9BY77 421 aaKnown RBP3.95□□□□□ -1.78
CD44-213ENST00000525209 COMMD4Q9H0A8 199 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 PPA2Q9H2U2 334 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 ALG9Q9H6U8 611 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 HRASLSQ9HDD0 168 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 PLEKHJ1Q9NW61 149 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 C1orf109Q9NX04 203 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 NTMQ9P121 344 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 MRPS28Q9Y2Q9 187 aaKnown RBP3.95□□□□□ -1.78
CD44-213ENST00000525209 CEP162Q5TB80 1403 aa3.95□□□□□ -1.78
CD44-213ENST00000525209 ARHGEF5Q12774 1597 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 NWD1Q149M9 1564 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 MAST1Q9Y2H9 1570 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 RPRD2Q5VT52 1461 aaKnown RBP3.94□□□□□ -1.78
CD44-213ENST00000525209 SRCAPQ6ZRS2 3230 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 CHD4Q14839 1912 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 ANKRD30BQ9BXX2 1392 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 KIF1BO60333 1816 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 A0A087X1B8 175 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 NSG1A0A0A6YYJ2 146 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 A0A1W2PQL4 384 aaPredicted RBP3.94□□□□□ -1.78
CD44-213ENST00000525209 GRID2IPA4D2P6 1211 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 MYMKA6NI61 221 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 SLC22A20A6NK97 555 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 TMEM238C9JI98 176 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 E5RJQ4 531 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 PROB1E7EW31 1015 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 G3V4G9 280 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 TMEM178BH3BS89 294 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 ZNF195O14628 629 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 TNFSF11O14788 317 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 MPPED1O15442 326 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 SGCEO43556 437 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 NCR1O76036 304 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 RCBTB2O95199 551 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 PSMG1O95456 288 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 TSPAN15O95858 294 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 CD160O95971 181 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 CHRM5P08912 532 aaPredicted RBP3.94□□□□□ -1.78
CD44-213ENST00000525209 HSPD1P10809 573 aaKnown RBP3.94□□□□□ -1.78
CD44-213ENST00000525209 MBL2P11226 248 aaPredicted RBP3.94□□□□□ -1.78
CD44-213ENST00000525209 IDO1P14902 403 aa3.94□□□□□ -1.78
CD44-213ENST00000525209 GATA1P15976 413 aaPredicted RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms