RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 SPATA5L1Q9BVQ7 753 aa16.35■□□□□ 0.21
CAPN1-203ENST00000525013 GSX2Q9BZM3 304 aa16.35■□□□□ 0.21
CAPN1-203ENST00000525013 IKZF5Q9H5V7 419 aa16.35■□□□□ 0.21
CAPN1-203ENST00000525013 TRIM33Q9UPN9 1127 aa16.35■□□□□ 0.21
CAPN1-203ENST00000525013 TRBV5-3A0A0A0MS03 114 aa16.34■□□□□ 0.21
CAPN1-203ENST00000525013 A0A0G2JND7 137 aa16.34■□□□□ 0.21
CAPN1-203ENST00000525013 A0A1W2PR80 420 aa16.34■□□□□ 0.21
CAPN1-203ENST00000525013 AQP7P3A6NL99 342 aa16.34■□□□□ 0.21
CAPN1-203ENST00000525013 ELOA3DA6NLF2 546 aaPredicted RBP16.34■□□□□ 0.21
CAPN1-203ENST00000525013 AHSA1O95433 338 aa16.34■□□□□ 0.21
CAPN1-203ENST00000525013 INHBBP09529 407 aa16.34■□□□□ 0.21
CAPN1-203ENST00000525013 PRKAR1BP31321 381 aa16.34■□□□□ 0.21
CAPN1-203ENST00000525013 SCARB2Q14108 478 aa16.34■□□□□ 0.21
CAPN1-203ENST00000525013 ELOA3BQ3SY89 546 aa16.34■□□□□ 0.21
CAPN1-203ENST00000525013 OR7E24Q6IFN5 339 aa16.34■□□□□ 0.21
CAPN1-203ENST00000525013 PRSS57Q6UWY2 283 aa16.34■□□□□ 0.21
CAPN1-203ENST00000525013 AAED1Q7RTV5 226 aa16.34■□□□□ 0.21
CAPN1-203ENST00000525013 BIVMQ86UB2 503 aa16.34■□□□□ 0.21
CAPN1-203ENST00000525013 ELOA3Q8NG57 546 aa16.34■□□□□ 0.21
CAPN1-203ENST00000525013 IGFBPL1Q8WX77 278 aa16.34■□□□□ 0.21
CAPN1-203ENST00000525013 SLC25A36Q96CQ1 311 aa16.34■□□□□ 0.21
CAPN1-203ENST00000525013 SMR3AQ99954 134 aa16.34■□□□□ 0.21
CAPN1-203ENST00000525013 SF3B5Q9BWJ5 86 aaKnown RBP16.34■□□□□ 0.21
CAPN1-203ENST00000525013 SLC7A10Q9NS82 523 aa16.34■□□□□ 0.21
CAPN1-203ENST00000525013 LEF1Q9UJU2 399 aaPredicted RBP16.34■□□□□ 0.21
CAPN1-203ENST00000525013 NDUFAF1Q9Y375 327 aa16.34■□□□□ 0.21
CAPN1-203ENST00000525013 ALPK2Q86TB3 2170 aa16.34■□□□□ 0.21
CAPN1-203ENST00000525013 CSPG4Q6UVK1 2322 aa16.34■□□□□ 0.21
CAPN1-203ENST00000525013 ABCD4O14678 606 aa16.33■□□□□ 0.2
CAPN1-203ENST00000525013 ANGPT2O15123 496 aa16.33■□□□□ 0.2
CAPN1-203ENST00000525013 EDF1O60869 148 aaKnown RBP16.33■□□□□ 0.2
CAPN1-203ENST00000525013 SASH3O75995 380 aa16.33■□□□□ 0.2
CAPN1-203ENST00000525013 ITGA5P08648 1049 aa16.33■□□□□ 0.2
CAPN1-203ENST00000525013 GPX2P18283 190 aa16.33■□□□□ 0.2
CAPN1-203ENST00000525013 AQP1P29972 269 aa16.33■□□□□ 0.2
CAPN1-203ENST00000525013 ZNF83P51522 516 aa16.33■□□□□ 0.2
CAPN1-203ENST00000525013 ATP5J2P56134 94 aa16.33■□□□□ 0.2
CAPN1-203ENST00000525013 RPS4XP62701 263 aaKnown RBP16.33■□□□□ 0.2
CAPN1-203ENST00000525013 GABRA6Q16445 453 aa16.33■□□□□ 0.2
CAPN1-203ENST00000525013 ZNF672Q499Z4 452 aaPredicted RBP16.33■□□□□ 0.2
CAPN1-203ENST00000525013 TSPO2Q5TGU0 170 aa16.33■□□□□ 0.2
CAPN1-203ENST00000525013 DLEU7Q6UYE1 221 aa16.33■□□□□ 0.2
CAPN1-203ENST00000525013 ZIC4Q8N9L1 334 aa16.33■□□□□ 0.2
CAPN1-203ENST00000525013 STK35Q8TDR2 534 aa16.33■□□□□ 0.2
CAPN1-203ENST00000525013 SMAP2Q8WU79 429 aaPredicted RBP16.33■□□□□ 0.2
CAPN1-203ENST00000525013 STON2Q8WXE9 905 aa16.33■□□□□ 0.2
CAPN1-203ENST00000525013 ZNF385AQ96PM9 386 aaKnown RBP16.33■□□□□ 0.2
CAPN1-203ENST00000525013 ZNF607Q96SK3 696 aa16.33■□□□□ 0.2
CAPN1-203ENST00000525013 TMEM38AQ9H6F2 299 aa16.33■□□□□ 0.2
CAPN1-203ENST00000525013 NPAP1Q9NZP6 1156 aa16.33■□□□□ 0.2
CAPN1-203ENST00000525013 SLC13A4Q9UKG4 626 aa16.33■□□□□ 0.2
CAPN1-203ENST00000525013 GMEB1Q9Y692 573 aa16.33■□□□□ 0.2
CAPN1-203ENST00000525013 ZANQ9Y493 2812 aa16.33■□□□□ 0.2
CAPN1-203ENST00000525013 TMEM229AB2RXF0 380 aa16.32■□□□□ 0.2
CAPN1-203ENST00000525013 H7C1Q1 480 aa16.32■□□□□ 0.2
CAPN1-203ENST00000525013 TPST1O60507 370 aa16.32■□□□□ 0.2
CAPN1-203ENST00000525013 TMCC2O75069 709 aa16.32■□□□□ 0.2
CAPN1-203ENST00000525013 NPIPB7O75200 414 aa16.32■□□□□ 0.2
CAPN1-203ENST00000525013 KRT33AO76009 404 aa16.32■□□□□ 0.2
CAPN1-203ENST00000525013 GTF2E2P29084 291 aaKnown RBP16.32■□□□□ 0.2
CAPN1-203ENST00000525013 RPS5P46782 204 aaKnown RBP16.32■□□□□ 0.2
CAPN1-203ENST00000525013 NCALDP61601 193 aa16.32■□□□□ 0.2
CAPN1-203ENST00000525013 TGFBR3Q03167 851 aa16.32■□□□□ 0.2
CAPN1-203ENST00000525013 RUNDC3AQ59EK9 446 aa16.32■□□□□ 0.2
CAPN1-203ENST00000525013 DHRS4L2Q6PKH6 230 aa16.32■□□□□ 0.2
CAPN1-203ENST00000525013 KLHL17Q6TDP4 642 aa16.32■□□□□ 0.2
CAPN1-203ENST00000525013 TMEM108Q6UXF1 575 aa16.32■□□□□ 0.2
CAPN1-203ENST00000525013 Q71RC1 249 aaPredicted RBP16.32■□□□□ 0.2
CAPN1-203ENST00000525013 DHDDSQ86SQ9 333 aa16.32■□□□□ 0.2
CAPN1-203ENST00000525013 RNF217Q8TC41 542 aa16.32■□□□□ 0.2
CAPN1-203ENST00000525013 GTPBP3Q969Y2 492 aaKnown RBP16.32■□□□□ 0.2
CAPN1-203ENST00000525013 TMEM45BQ96B21 275 aa16.32■□□□□ 0.2
CAPN1-203ENST00000525013 MUS81Q96NY9 551 aa16.32■□□□□ 0.2
CAPN1-203ENST00000525013 CPPED1Q9BRF8 314 aaPredicted RBP16.32■□□□□ 0.2
CAPN1-203ENST00000525013 BDH2Q9BUT1 245 aa16.32■□□□□ 0.2
CAPN1-203ENST00000525013 C1QTNF6Q9BXI9 259 aa16.32■□□□□ 0.2
CAPN1-203ENST00000525013 RSPO3Q9BXY4 272 aaPredicted RBP16.32■□□□□ 0.2
CAPN1-203ENST00000525013 TRIM2Q9C040 744 aa16.32■□□□□ 0.2
CAPN1-203ENST00000525013 ZNF701Q9NV72 531 aaPredicted RBP16.32■□□□□ 0.2
CAPN1-203ENST00000525013 SLC25A15Q9Y619 301 aa16.32■□□□□ 0.2
CAPN1-203ENST00000525013 NSD1Q96L73 2696 aaPredicted RBP16.31■□□□□ 0.2
CAPN1-203ENST00000525013 A0A1B0GWA3 101 aa16.31■□□□□ 0.2
CAPN1-203ENST00000525013 PRORSD1PA6NEY8 169 aa16.31■□□□□ 0.2
CAPN1-203ENST00000525013 TRIM64A6NGJ6 449 aa16.31■□□□□ 0.2
CAPN1-203ENST00000525013 TRIM64BA6NI03 449 aa16.31■□□□□ 0.2
CAPN1-203ENST00000525013 SMAD7O15105 426 aaKnown RBP16.31■□□□□ 0.2
CAPN1-203ENST00000525013 SERPINB7O75635 380 aa16.31■□□□□ 0.2
CAPN1-203ENST00000525013 VAMP5O95183 116 aa16.31■□□□□ 0.2
CAPN1-203ENST00000525013 SOD3P08294 240 aa16.31■□□□□ 0.2
CAPN1-203ENST00000525013 CDH2P19022 906 aaPredicted RBP16.31■□□□□ 0.2
CAPN1-203ENST00000525013 HTR2AP28223 471 aa16.31■□□□□ 0.2
CAPN1-203ENST00000525013 CDH11P55287 796 aa16.31■□□□□ 0.2
CAPN1-203ENST00000525013 RGS8P57771 180 aaPredicted RBP16.31■□□□□ 0.2
CAPN1-203ENST00000525013 ADRM1Q16186 407 aa16.31■□□□□ 0.2
CAPN1-203ENST00000525013 CYP51A1Q16850 503 aa16.31■□□□□ 0.2
CAPN1-203ENST00000525013 GLIPR1L2Q4G1C9 344 aa16.31■□□□□ 0.2
CAPN1-203ENST00000525013 COMTD1Q86VU5 262 aa16.31■□□□□ 0.2
CAPN1-203ENST00000525013 ARMC8Q8IUR7 673 aa16.31■□□□□ 0.2
CAPN1-203ENST00000525013 PIAS4Q8N2W9 510 aaPredicted RBP16.31■□□□□ 0.2
CAPN1-203ENST00000525013 HIPK4Q8NE63 616 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms