RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 TRAV1-2A0A0B4J238 106 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 TBC1D3FA6NER0 549 aaPredicted RBP8.35□□□□□ -1.07
CSMD1-212ENST00000523387 SULT1B1O43704 296 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 B3GALT2O43825 422 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 B3GALNT1O75752 331 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 NDUFB2O95178 105 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 OR8G3PP0DMU2 310 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 TBXA2RP21731 343 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 P2RX1P51575 399 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 ACTBP60709 375 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 GPR85P60893 370 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 ACTG1P63261 375 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 REEP5Q00765 189 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 NHLRC3Q5JS37 347 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 TBC1D3GQ6DHY5 549 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 RGS7BPQ6MZT1 257 aaPredicted RBP8.35□□□□□ -1.07
CSMD1-212ENST00000523387 ENPP7Q6UWV6 458 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 TMEM64Q6YI46 380 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 COMTD1Q86VU5 262 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 STPG2Q8N412 459 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 SPICQ8N5J4 248 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 OR51Q1Q8NH59 317 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 HSD17B8Q92506 261 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 TCEAL3Q969E4 200 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 SLC25A32Q9H2D1 315 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 SPHK2Q9NRA0 654 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 FBXL4Q9UKA2 621 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 KCNMB2Q9Y691 235 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 A0A1W2PR48 441 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 PRICKLE3O43900 615 aaPredicted RBP8.34□□□□□ -1.07
CSMD1-212ENST00000523387 RAD1O60671 282 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 ATG12O94817 140 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 DNASE1L1P49184 302 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 ZP1P60852 638 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 SREBF2Q12772 1141 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 UNQ6126/PRO20091Q6UXV3 157 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 ZNF836Q6ZNA1 936 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 NAXDQ8IW45 347 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 BPIFCQ8NFQ6 507 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 OR1J4Q8NGS1 313 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 MRI1Q9BV20 369 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 PHPT1Q9NRX4 125 aaPredicted RBP8.34□□□□□ -1.07
CSMD1-212ENST00000523387 MYO7AQ13402 2215 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 TMEM82A0PJX8 343 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 FAM74A7A6NL05 159 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 C1orf196B1AJZ1 125 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 NPC1O15118 1278 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 GMFGO60234 142 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 NFATC1O95644 943 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 NUDT14O95848 222 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 IGF2P01344 180 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 DCNP07585 359 aaKnown RBP8.34□□□□□ -1.07
CSMD1-212ENST00000523387 ZNF14P17017 642 aaPredicted RBP8.34□□□□□ -1.07
CSMD1-212ENST00000523387 MAKP20794 623 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 FAM74A3Q4VXF1 159 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 H3F3CQ6NXT2 135 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 TAF8Q7Z7C8 310 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 IFNL1Q8IU54 200 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 FOXRED2Q8IWF2 684 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 ZNF615Q8N8J6 731 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 OR11G2Q8NGC1 345 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 CNRIP1Q96F85 164 aaPredicted RBP8.34□□□□□ -1.07
CSMD1-212ENST00000523387 NRTNQ99748 197 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 CRB3Q9BUF7 120 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 SYT4Q9H2B2 425 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 MYEF2Q9P2K5 600 aaKnown RBP8.34□□□□□ -1.07
CSMD1-212ENST00000523387 NCDNQ9UBB6 729 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 B4GALT2O60909 372 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 ZNF432O94892 652 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 NDUFB6O95139 128 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 SNAPINO95295 136 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 CXCL14O95715 111 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 CBR1P16152 277 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 MAGEB1P43366 347 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 RAB28P51157 221 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 ILF3Q12906 894 aaKnown RBP eCLIP8.34□□□□□ -1.07
CSMD1-212ENST00000523387 ARHGAP19Q14CB8 494 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 AVPI1Q5T686 147 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 ZNF626Q68DY1 528 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 LEG1Q6P5S2 330 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 GAREM2Q75VX8 874 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 RNF113BQ8IZP6 322 aaKnown RBP8.34□□□□□ -1.07
CSMD1-212ENST00000523387 POMGNT2Q8NAT1 580 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 KREMEN2Q8NCW0 462 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 OR2L5Q8NG80 312 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 RERGQ96A58 199 aaPredicted RBP8.34□□□□□ -1.07
CSMD1-212ENST00000523387 WDR34Q96EX3 536 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 SLC35A4Q96G79 324 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 USB1Q9BQ65 265 aaKnown RBP8.34□□□□□ -1.07
CSMD1-212ENST00000523387 RAB11FIP5Q9BXF6 653 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 SHARPINQ9H0F6 387 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 PIGMQ9H3S5 423 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 NDRG3Q9UGV2 375 aa8.34□□□□□ -1.07
CSMD1-212ENST00000523387 GREB1Q4ZG55 1949 aa8.33□□□□□ -1.08
CSMD1-212ENST00000523387 PRAMEF27A3QJZ7 478 aa8.33□□□□□ -1.08
CSMD1-212ENST00000523387 M0R036 132 aa8.33□□□□□ -1.08
CSMD1-212ENST00000523387 MAN2B1O00754 1011 aa8.33□□□□□ -1.08
CSMD1-212ENST00000523387 AGPAT2O15120 278 aa8.33□□□□□ -1.08
CSMD1-212ENST00000523387 PAPLNO95428 1278 aa8.33□□□□□ -1.08
CSMD1-212ENST00000523387 HLA-AP01891 365 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms