RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 ROS1P08922 2347 aa16.44■□□□□ 0.22
SPIDR-220ENST00000522900 TRIM64A6NGJ6 449 aa16.44■□□□□ 0.22
SPIDR-220ENST00000522900 TRIM64BA6NI03 449 aa16.44■□□□□ 0.22
SPIDR-220ENST00000522900 AQP7P3A6NL99 342 aa16.44■□□□□ 0.22
SPIDR-220ENST00000522900 EDF1O60869 148 aaKnown RBP16.44■□□□□ 0.22
SPIDR-220ENST00000522900 DANCRP0C864 163 aa16.44■□□□□ 0.22
SPIDR-220ENST00000522900 PAX1P15863 534 aa16.44■□□□□ 0.22
SPIDR-220ENST00000522900 ZNF672Q499Z4 452 aaPredicted RBP16.44■□□□□ 0.22
SPIDR-220ENST00000522900 REEP3Q6NUK4 255 aa16.44■□□□□ 0.22
SPIDR-220ENST00000522900 P2RY8Q86VZ1 359 aa16.44■□□□□ 0.22
SPIDR-220ENST00000522900 OR9K2Q8NGE7 335 aa16.44■□□□□ 0.22
SPIDR-220ENST00000522900 MUS81Q96NY9 551 aa16.44■□□□□ 0.22
SPIDR-220ENST00000522900 CPPED1Q9BRF8 314 aaPredicted RBP16.44■□□□□ 0.22
SPIDR-220ENST00000522900 C1QTNF6Q9BXI9 259 aa16.44■□□□□ 0.22
SPIDR-220ENST00000522900 TRIM2Q9C040 744 aa16.44■□□□□ 0.22
SPIDR-220ENST00000522900 NPHS2Q9NP85 383 aa16.44■□□□□ 0.22
SPIDR-220ENST00000522900 PARPBPQ9NWS1 579 aa16.44■□□□□ 0.22
SPIDR-220ENST00000522900 TAS2R16Q9NYV7 291 aa16.44■□□□□ 0.22
SPIDR-220ENST00000522900 SLC25A15Q9Y619 301 aa16.44■□□□□ 0.22
SPIDR-220ENST00000522900 DSCAMO60469 2012 aa16.43■□□□□ 0.22
SPIDR-220ENST00000522900 NIPBLQ6KC79 2804 aaeCLIP16.43■□□□□ 0.22
SPIDR-220ENST00000522900 SHISA9B4DS77 424 aa16.43■□□□□ 0.22
SPIDR-220ENST00000522900 H7C1Q1 480 aa16.43■□□□□ 0.22
SPIDR-220ENST00000522900 PPIBP23284 216 aaKnown RBP16.43■□□□□ 0.22
SPIDR-220ENST00000522900 HTR2AP28223 471 aa16.43■□□□□ 0.22
SPIDR-220ENST00000522900 PRKAR1BP31321 381 aa16.43■□□□□ 0.22
SPIDR-220ENST00000522900 ZNF83P51522 516 aa16.43■□□□□ 0.22
SPIDR-220ENST00000522900 EGR4Q05215 589 aa16.43■□□□□ 0.22
SPIDR-220ENST00000522900 PGGHGQ32M88 737 aa16.43■□□□□ 0.22
SPIDR-220ENST00000522900 RUNDC3AQ59EK9 446 aa16.43■□□□□ 0.22
SPIDR-220ENST00000522900 TMEM225Q6GV28 225 aa16.43■□□□□ 0.22
SPIDR-220ENST00000522900 AAED1Q7RTV5 226 aa16.43■□□□□ 0.22
SPIDR-220ENST00000522900 BIVMQ86UB2 503 aa16.43■□□□□ 0.22
SPIDR-220ENST00000522900 GPAT4Q86UL3 456 aa16.43■□□□□ 0.22
SPIDR-220ENST00000522900 RETREG3Q86VR2 466 aa16.43■□□□□ 0.22
SPIDR-220ENST00000522900 WDR31Q8NA23 367 aa16.43■□□□□ 0.22
SPIDR-220ENST00000522900 SMAP2Q8WU79 429 aaPredicted RBP16.43■□□□□ 0.22
SPIDR-220ENST00000522900 STON2Q8WXE9 905 aa16.43■□□□□ 0.22
SPIDR-220ENST00000522900 SLC35B4Q969S0 331 aa16.43■□□□□ 0.22
SPIDR-220ENST00000522900 FBXW5Q969U6 566 aa16.43■□□□□ 0.22
SPIDR-220ENST00000522900 TMEM45BQ96B21 275 aa16.43■□□□□ 0.22
SPIDR-220ENST00000522900 KTI12Q96EK9 354 aaPredicted RBP16.43■□□□□ 0.22
SPIDR-220ENST00000522900 WFDC6Q9BQY6 131 aa16.43■□□□□ 0.22
SPIDR-220ENST00000522900 PTDSS2Q9BVG9 487 aa16.43■□□□□ 0.22
SPIDR-220ENST00000522900 SF3B5Q9BWJ5 86 aaKnown RBP16.43■□□□□ 0.22
SPIDR-220ENST00000522900 TAPBPLQ9BX59 468 aa16.43■□□□□ 0.22
SPIDR-220ENST00000522900 CXorf56Q9H5V9 222 aa16.43■□□□□ 0.22
SPIDR-220ENST00000522900 UPB1Q9UBR1 384 aa16.43■□□□□ 0.22
SPIDR-220ENST00000522900 C2CD3Q4AC94 2353 aa16.43■□□□□ 0.22
SPIDR-220ENST00000522900 OVOL3O00110 214 aa16.42■□□□□ 0.22
SPIDR-220ENST00000522900 ABCD4O14678 606 aa16.42■□□□□ 0.22
SPIDR-220ENST00000522900 HOXB4P17483 251 aaPredicted RBP16.42■□□□□ 0.22
SPIDR-220ENST00000522900 AQP1P29972 269 aa16.42■□□□□ 0.22
SPIDR-220ENST00000522900 RPS5P46782 204 aaKnown RBP16.42■□□□□ 0.22
SPIDR-220ENST00000522900 RPS4XP62701 263 aaKnown RBP16.42■□□□□ 0.22
SPIDR-220ENST00000522900 IRX1P78414 480 aaPredicted RBP16.42■□□□□ 0.22
SPIDR-220ENST00000522900 LGALS3BPQ08380 585 aa16.42■□□□□ 0.22
SPIDR-220ENST00000522900 SCARB2Q14108 478 aa16.42■□□□□ 0.22
SPIDR-220ENST00000522900 SELPLGQ14242 412 aa16.42■□□□□ 0.22
SPIDR-220ENST00000522900 DHRS4L2Q6PKH6 230 aa16.42■□□□□ 0.22
SPIDR-220ENST00000522900 CREB3L2Q70SY1 520 aa16.42■□□□□ 0.22
SPIDR-220ENST00000522900 KDM8Q8N371 416 aa16.42■□□□□ 0.22
SPIDR-220ENST00000522900 STK35Q8TDR2 534 aa16.42■□□□□ 0.22
SPIDR-220ENST00000522900 SLC25A36Q96CQ1 311 aa16.42■□□□□ 0.22
SPIDR-220ENST00000522900 POM121Q96HA1 1249 aa16.42■□□□□ 0.22
SPIDR-220ENST00000522900 RABEP2Q9H5N1 569 aa16.42■□□□□ 0.22
SPIDR-220ENST00000522900 TMEM38AQ9H6F2 299 aa16.42■□□□□ 0.22
SPIDR-220ENST00000522900 SEC14L4Q9UDX3 406 aa16.42■□□□□ 0.22
SPIDR-220ENST00000522900 LEF1Q9UJU2 399 aaPredicted RBP16.42■□□□□ 0.22
SPIDR-220ENST00000522900 MAGED1Q9Y5V3 778 aaPredicted RBP16.42■□□□□ 0.22
SPIDR-220ENST00000522900 A0A1B0GWA3 101 aa16.41■□□□□ 0.22
SPIDR-220ENST00000522900 EVPLLA8MZ36 301 aa16.41■□□□□ 0.22
SPIDR-220ENST00000522900 FTCDNL1E5RQL4 147 aa16.41■□□□□ 0.22
SPIDR-220ENST00000522900 SMAD7O15105 426 aaKnown RBP16.41■□□□□ 0.22
SPIDR-220ENST00000522900 CD8AP01732 235 aa16.41■□□□□ 0.22
SPIDR-220ENST00000522900 PTNP21246 168 aa16.41■□□□□ 0.22
SPIDR-220ENST00000522900 SLC6A2P23975 617 aa16.41■□□□□ 0.22
SPIDR-220ENST00000522900 ATP5J2P56134 94 aa16.41■□□□□ 0.22
SPIDR-220ENST00000522900 SPOCK1Q08629 439 aa16.41■□□□□ 0.22
SPIDR-220ENST00000522900 OR7E24Q6IFN5 339 aa16.41■□□□□ 0.22
SPIDR-220ENST00000522900 KRT73Q86Y46 540 aa16.41■□□□□ 0.22
SPIDR-220ENST00000522900 PTOV1Q86YD1 416 aa16.41■□□□□ 0.22
SPIDR-220ENST00000522900 EPHX4Q8IUS5 362 aa16.41■□□□□ 0.22
SPIDR-220ENST00000522900 LSMEM1Q8N8F7 131 aa16.41■□□□□ 0.22
SPIDR-220ENST00000522900 MFSD8Q8NHS3 518 aa16.41■□□□□ 0.22
SPIDR-220ENST00000522900 COX4I2Q96KJ9 171 aa16.41■□□□□ 0.22
SPIDR-220ENST00000522900 AMBRA1Q9C0C7 1298 aa16.41■□□□□ 0.22
SPIDR-220ENST00000522900 CISD1Q9NZ45 108 aaKnown RBP16.41■□□□□ 0.22
SPIDR-220ENST00000522900 RPS6KB2Q9UBS0 482 aa16.41■□□□□ 0.22
SPIDR-220ENST00000522900 NDUFAF1Q9Y375 327 aa16.41■□□□□ 0.22
SPIDR-220ENST00000522900 IGKV1D-42A0A075B6H8 117 aa16.4■□□□□ 0.22
SPIDR-220ENST00000522900 A0A0G2JND7 137 aa16.4■□□□□ 0.22
SPIDR-220ENST00000522900 ELOA3DA6NLF2 546 aaPredicted RBP16.4■□□□□ 0.22
SPIDR-220ENST00000522900 TPST2O60704 377 aa16.4■□□□□ 0.22
SPIDR-220ENST00000522900 TMCC2O75069 709 aa16.4■□□□□ 0.22
SPIDR-220ENST00000522900 AHSA1O95433 338 aa16.4■□□□□ 0.22
SPIDR-220ENST00000522900 LY6G6DO95868 133 aa16.4■□□□□ 0.22
SPIDR-220ENST00000522900 CDH2P19022 906 aaPredicted RBP16.4■□□□□ 0.22
SPIDR-220ENST00000522900 CDKN1AP38936 164 aa16.4■□□□□ 0.22
SPIDR-220ENST00000522900 SELENOPP49908 381 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms