RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 GPAT4Q86UL3 456 aa9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 PARP8Q8N3A8 854 aa9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 ZIC4Q8N9L1 334 aa9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 LINC01006Q8NI28 216 aa9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 ZNF563Q8TA94 476 aa9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 PYROXD1Q8WU10 500 aa9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 ST8SIA1Q92185 356 aa9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 RAB1CQ92928 201 aa9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 TIMD4Q96H15 378 aa9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 NAA11Q9BSU3 229 aaPredicted RBP9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 CHIAQ9BZP6 476 aa9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 SLC6A13Q9NSD5 602 aa9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 ACER3Q9NUN7 267 aa9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 TAAR3PQ9P1P4 343 aa9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 TMEM181Q9P2C4 612 aa9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 CHRNA9Q9UGM1 479 aa9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 HDGFL3Q9Y3E1 203 aa9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 DTNAQ9Y4J8 743 aa9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 SPIN1Q9Y657 262 aaPredicted RBP9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 KCNE3Q9Y6H6 103 aa9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 PLXNB1O43157 2135 aa9.37□□□□□ -0.91
CTNNA1-234ENST00000522227 TCRBV9S1A1TA0A576 114 aa9.36□□□□□ -0.91
CTNNA1-234ENST00000522227 FAM159BA6NKW6 160 aa9.36□□□□□ -0.91
CTNNA1-234ENST00000522227 PGRMC1O00264 195 aaKnown RBP9.36□□□□□ -0.91
CTNNA1-234ENST00000522227 SHOX2O60902 331 aaPredicted RBP9.36□□□□□ -0.91
CTNNA1-234ENST00000522227 ERLIN1O75477 346 aa9.36□□□□□ -0.91
CTNNA1-234ENST00000522227 FOXH1O75593 365 aa9.36□□□□□ -0.91
CTNNA1-234ENST00000522227 UPK3AO75631 287 aa9.36□□□□□ -0.91
CTNNA1-234ENST00000522227 AKR7A3O95154 331 aa9.36□□□□□ -0.91
CTNNA1-234ENST00000522227 HSD3B1P14060 373 aa9.36□□□□□ -0.91
CTNNA1-234ENST00000522227 HSD3B2P26439 372 aa9.36□□□□□ -0.91
CTNNA1-234ENST00000522227 ZNF75DP51815 510 aa9.36□□□□□ -0.91
CTNNA1-234ENST00000522227 ROR2Q01974 943 aaKnown RBP9.36□□□□□ -0.91
CTNNA1-234ENST00000522227 LASP1Q14847 261 aaKnown RBP9.36□□□□□ -0.91
CTNNA1-234ENST00000522227 TSTQ16762 297 aaKnown RBP9.36□□□□□ -0.91
CTNNA1-234ENST00000522227 DCST2Q5T1A1 773 aa9.36□□□□□ -0.91
CTNNA1-234ENST00000522227 MROH9Q5TGP6 573 aa9.36□□□□□ -0.91
CTNNA1-234ENST00000522227 METTL2BQ6P1Q9 378 aaKnown RBP9.36□□□□□ -0.91
CTNNA1-234ENST00000522227 TMEM154Q6P9G4 183 aa9.36□□□□□ -0.91
CTNNA1-234ENST00000522227 BRD3OSQ6XYD6 125 aa9.36□□□□□ -0.91
CTNNA1-234ENST00000522227 OLIG3Q7RTU3 272 aa9.36□□□□□ -0.91
CTNNA1-234ENST00000522227 ADGRG3Q86Y34 549 aa9.36□□□□□ -0.91
CTNNA1-234ENST00000522227 TMEM99Q8N816 258 aa9.36□□□□□ -0.91
CTNNA1-234ENST00000522227 OR9K2Q8NGE7 335 aa9.36□□□□□ -0.91
CTNNA1-234ENST00000522227 TMEM234Q8WY98 164 aa9.36□□□□□ -0.91
CTNNA1-234ENST00000522227 TMEM45BQ96B21 275 aa9.36□□□□□ -0.91
CTNNA1-234ENST00000522227 BOD1Q96IK1 185 aa9.36□□□□□ -0.91
CTNNA1-234ENST00000522227 TSPAN32Q96QS1 320 aa9.36□□□□□ -0.91
CTNNA1-234ENST00000522227 SHCBP1LQ9BZQ2 653 aa9.36□□□□□ -0.91
CTNNA1-234ENST00000522227 HOXD1Q9GZZ0 328 aa9.36□□□□□ -0.91
CTNNA1-234ENST00000522227 SERHL2Q9H4I8 314 aa9.36□□□□□ -0.91
CTNNA1-234ENST00000522227 ZNF385DQ9H6B1 395 aa9.36□□□□□ -0.91
CTNNA1-234ENST00000522227 SIRT3Q9NTG7 399 aaPredicted RBP9.36□□□□□ -0.91
CTNNA1-234ENST00000522227 NECAP2Q9NVZ3 263 aa9.36□□□□□ -0.91
CTNNA1-234ENST00000522227 TRAV40A0A0B4J280 105 aa9.35□□□□□ -0.91
CTNNA1-234ENST00000522227 H0YL77 283 aa9.35□□□□□ -0.91
CTNNA1-234ENST00000522227 ETV2O00321 342 aaPredicted RBP9.35□□□□□ -0.91
CTNNA1-234ENST00000522227 SMIM24O75264 130 aa9.35□□□□□ -0.91
CTNNA1-234ENST00000522227 ULK1O75385 1050 aa9.35□□□□□ -0.91
CTNNA1-234ENST00000522227 CLPXO76031 633 aa9.35□□□□□ -0.91
CTNNA1-234ENST00000522227 KLHL2O95198 593 aa9.35□□□□□ -0.91
CTNNA1-234ENST00000522227 CLPTM1O96005 669 aa9.35□□□□□ -0.91
CTNNA1-234ENST00000522227 CD79AP11912 226 aa9.35□□□□□ -0.91
CTNNA1-234ENST00000522227 IMPDH2P12268 514 aa9.35□□□□□ -0.91
CTNNA1-234ENST00000522227 PAX7P23759 505 aa9.35□□□□□ -0.91
CTNNA1-234ENST00000522227 ARR3P36575 388 aa9.35□□□□□ -0.91
CTNNA1-234ENST00000522227 APOBEC1P41238 236 aaKnown RBP9.35□□□□□ -0.91
CTNNA1-234ENST00000522227 PROK1P58294 105 aa9.35□□□□□ -0.91
CTNNA1-234ENST00000522227 SLC35A1P78382 337 aa9.35□□□□□ -0.91
CTNNA1-234ENST00000522227 H3F3AP84243 136 aa9.35□□□□□ -0.91
CTNNA1-234ENST00000522227 SKP2Q13309 424 aa9.35□□□□□ -0.91
CTNNA1-234ENST00000522227 PDCD1Q15116 288 aa9.35□□□□□ -0.91
CTNNA1-234ENST00000522227 TRMT5Q32P41 509 aaKnown RBP9.35□□□□□ -0.91
CTNNA1-234ENST00000522227 ZNF385BQ569K4 471 aa9.35□□□□□ -0.91
CTNNA1-234ENST00000522227 NIPAL3Q6P499 406 aa9.35□□□□□ -0.91
CTNNA1-234ENST00000522227 FAM169BQ8N8A8 192 aa9.35□□□□□ -0.91
CTNNA1-234ENST00000522227 BHLHE22Q8NFJ8 381 aaPredicted RBP9.35□□□□□ -0.91
CTNNA1-234ENST00000522227 METTL6Q8TCB7 284 aa9.35□□□□□ -0.91
CTNNA1-234ENST00000522227 MAGEE2Q8TD90 523 aaPredicted RBP9.35□□□□□ -0.91
CTNNA1-234ENST00000522227 ZNF483Q8TF39 744 aaPredicted RBP9.35□□□□□ -0.91
CTNNA1-234ENST00000522227 CCL17Q92583 94 aa9.35□□□□□ -0.91
CTNNA1-234ENST00000522227 EGLN2Q96KS0 407 aa9.35□□□□□ -0.91
CTNNA1-234ENST00000522227 GPR78Q96P69 363 aa9.35□□□□□ -0.91
CTNNA1-234ENST00000522227 CCDC106Q9BWC9 280 aa9.35□□□□□ -0.91
CTNNA1-234ENST00000522227 LAT2Q9GZY6 243 aa9.35□□□□□ -0.91
CTNNA1-234ENST00000522227 HINT3Q9NQE9 182 aaKnown RBP9.35□□□□□ -0.91
CTNNA1-234ENST00000522227 GAR1Q9NY12 217 aaKnown RBP9.35□□□□□ -0.91
CTNNA1-234ENST00000522227 TAS2R7Q9NYW3 318 aa9.35□□□□□ -0.91
CTNNA1-234ENST00000522227 TIMM22Q9Y584 194 aa9.35□□□□□ -0.91
CTNNA1-234ENST00000522227 CENPVL1A0A0U1RR11 272 aa9.34□□□□□ -0.91
CTNNA1-234ENST00000522227 C5orf63A6NC05 138 aa9.34□□□□□ -0.91
CTNNA1-234ENST00000522227 C17orf100A8MU93 164 aa9.34□□□□□ -0.91
CTNNA1-234ENST00000522227 SRRM5B3KS81 715 aa9.34□□□□□ -0.91
CTNNA1-234ENST00000522227 STX16-NPEPL1H3BU86 382 aa9.34□□□□□ -0.91
CTNNA1-234ENST00000522227 STX16O14662 325 aa9.34□□□□□ -0.91
CTNNA1-234ENST00000522227 AKAP10O43572 662 aa9.34□□□□□ -0.91
CTNNA1-234ENST00000522227 DNPH1O43598 174 aa9.34□□□□□ -0.91
CTNNA1-234ENST00000522227 EIF1BO60739 113 aaKnown RBP9.34□□□□□ -0.91
CTNNA1-234ENST00000522227 RSL1D1O76021 490 aaKnown RBP9.34□□□□□ -0.91
CTNNA1-234ENST00000522227 HSPA4LO95757 839 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms