RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 GGTLC2Q14390 218 aa23.53■■□□□ 1.36
COL13A1-214ENST00000522165 CPEB2Q7Z5Q1 589 aaKnown RBP23.53■■□□□ 1.36
COL13A1-214ENST00000522165 SYT14Q8NB59 555 aa23.53■■□□□ 1.36
COL13A1-214ENST00000522165 SMAP2Q8WU79 429 aaPredicted RBP23.53■■□□□ 1.36
COL13A1-214ENST00000522165 DCLRE1CQ96SD1 692 aaKnown RBP23.53■■□□□ 1.36
COL13A1-214ENST00000522165 LPAR4Q99677 370 aa23.53■■□□□ 1.36
COL13A1-214ENST00000522165 MROQ9BYG7 248 aa23.53■■□□□ 1.36
COL13A1-214ENST00000522165 NMNAT2Q9BZQ4 307 aa23.53■■□□□ 1.36
COL13A1-214ENST00000522165 SIRT4Q9Y6E7 314 aaPredicted RBP23.53■■□□□ 1.36
COL13A1-214ENST00000522165 A0A1W2PQL4 384 aaPredicted RBP23.53■■□□□ 1.36
COL13A1-214ENST00000522165 OR6C68A6NDL8 312 aa23.53■■□□□ 1.36
COL13A1-214ENST00000522165 ZNF354AO60765 605 aaPredicted RBP23.53■■□□□ 1.36
COL13A1-214ENST00000522165 CD14P08571 375 aa23.53■■□□□ 1.36
COL13A1-214ENST00000522165 TGM4P49221 684 aa23.53■■□□□ 1.36
COL13A1-214ENST00000522165 RUNX1T1Q06455 604 aa23.53■■□□□ 1.36
COL13A1-214ENST00000522165 TMEM205Q6UW68 189 aa23.53■■□□□ 1.36
COL13A1-214ENST00000522165 THAP3Q8WTV1 239 aaPredicted RBP23.53■■□□□ 1.36
COL13A1-214ENST00000522165 CRB3Q9BUF7 120 aa23.53■■□□□ 1.36
COL13A1-214ENST00000522165 TRIM36Q9NQ86 728 aa23.53■■□□□ 1.36
COL13A1-214ENST00000522165 SLC6A5Q9Y345 797 aa23.53■■□□□ 1.36
COL13A1-214ENST00000522165 TRBV11-1A0A0K0K1C0 115 aa23.52■■□□□ 1.36
COL13A1-214ENST00000522165 GDF9O60383 454 aa23.52■■□□□ 1.36
COL13A1-214ENST00000522165 CPNE3O75131 537 aaKnown RBP23.52■■□□□ 1.36
COL13A1-214ENST00000522165 OCM2P0CE71 109 aa23.52■■□□□ 1.36
COL13A1-214ENST00000522165 OCMP0CE72 109 aaPredicted RBP23.52■■□□□ 1.36
COL13A1-214ENST00000522165 APEHP13798 732 aaKnown RBP23.52■■□□□ 1.36
COL13A1-214ENST00000522165 LGALS3BPQ08380 585 aa23.52■■□□□ 1.36
COL13A1-214ENST00000522165 TRA2AQ13595 282 aaKnown RBP eCLIP23.52■■□□□ 1.36
COL13A1-214ENST00000522165 ALG10Q5BKT4 473 aa23.52■■□□□ 1.36
COL13A1-214ENST00000522165 LCN1P1Q5VSP4 162 aa23.52■■□□□ 1.36
COL13A1-214ENST00000522165 MRPL14Q6P1L8 145 aaKnown RBP23.52■■□□□ 1.36
COL13A1-214ENST00000522165 FAM122BQ7Z309 247 aa23.52■■□□□ 1.36
COL13A1-214ENST00000522165 GPALPP1Q8IXQ4 340 aa23.52■■□□□ 1.36
COL13A1-214ENST00000522165 BMPERQ8N8U9 685 aa23.52■■□□□ 1.36
COL13A1-214ENST00000522165 OR51L1Q8NGJ5 315 aa23.52■■□□□ 1.36
COL13A1-214ENST00000522165 ZPLD1Q8TCW7 415 aa23.52■■□□□ 1.36
COL13A1-214ENST00000522165 GPR119Q8TDV5 335 aa23.52■■□□□ 1.36
COL13A1-214ENST00000522165 ABTB1Q969K4 478 aaPredicted RBP23.52■■□□□ 1.36
COL13A1-214ENST00000522165 HDHD5Q9BXW7 423 aa23.52■■□□□ 1.36
COL13A1-214ENST00000522165 AKIRIN1Q9H9L7 192 aaPredicted RBP23.52■■□□□ 1.36
COL13A1-214ENST00000522165 DAPK2Q9UIK4 370 aa23.52■■□□□ 1.36
COL13A1-214ENST00000522165 ZNF229Q9UJW7 825 aa23.52■■□□□ 1.36
COL13A1-214ENST00000522165 VPS13AQ96RL7 3174 aa23.52■■□□□ 1.36
COL13A1-214ENST00000522165 TEX13CA0A0J9YWL9 993 aa23.52■■□□□ 1.35
COL13A1-214ENST00000522165 IQCMA0A1B0GVH7 501 aa23.52■■□□□ 1.35
COL13A1-214ENST00000522165 TMEM200CA6NKL6 621 aa23.52■■□□□ 1.35
COL13A1-214ENST00000522165 GABRPO00591 440 aa23.52■■□□□ 1.35
COL13A1-214ENST00000522165 RNF13O43567 381 aa23.52■■□□□ 1.35
COL13A1-214ENST00000522165 UPK1BO75841 260 aa23.52■■□□□ 1.35
COL13A1-214ENST00000522165 GAAP10253 952 aa23.52■■□□□ 1.35
COL13A1-214ENST00000522165 RPS5P46782 204 aaKnown RBP23.52■■□□□ 1.35
COL13A1-214ENST00000522165 DIO1P49895 249 aa23.52■■□□□ 1.35
COL13A1-214ENST00000522165 SLC26A5P58743 744 aa23.52■■□□□ 1.35
COL13A1-214ENST00000522165 HNRNPA0Q13151 305 aaKnown RBP23.52■■□□□ 1.35
COL13A1-214ENST00000522165 PON3Q15166 354 aa23.52■■□□□ 1.35
COL13A1-214ENST00000522165 POMGNT2Q8NAT1 580 aa23.52■■□□□ 1.35
COL13A1-214ENST00000522165 B4GALNT2Q8NHY0 566 aa23.52■■□□□ 1.35
COL13A1-214ENST00000522165 DUSP19Q8WTR2 217 aa23.52■■□□□ 1.35
COL13A1-214ENST00000522165 Q96M85 177 aa23.52■■□□□ 1.35
COL13A1-214ENST00000522165 CNN2Q99439 309 aaKnown RBP23.52■■□□□ 1.35
COL13A1-214ENST00000522165 FKRPQ9H9S5 495 aa23.52■■□□□ 1.35
COL13A1-214ENST00000522165 ZMIZ1Q9ULJ6 1067 aa23.52■■□□□ 1.35
COL13A1-214ENST00000522165 IMPA2O14732 288 aa23.51■■□□□ 1.35
COL13A1-214ENST00000522165 WISP1O95388 367 aa23.51■■□□□ 1.35
COL13A1-214ENST00000522165 TFP02787 698 aa23.51■■□□□ 1.35
COL13A1-214ENST00000522165 SPI1P17947 270 aa23.51■■□□□ 1.35
COL13A1-214ENST00000522165 FBXW4P57775 412 aa23.51■■□□□ 1.35
COL13A1-214ENST00000522165 CTXN1P60606 82 aa23.51■■□□□ 1.35
COL13A1-214ENST00000522165 ZFP36L1Q07352 338 aaKnown RBP23.51■■□□□ 1.35
COL13A1-214ENST00000522165 OXA1LQ15070 435 aa23.51■■□□□ 1.35
COL13A1-214ENST00000522165 QPRTQ15274 297 aa23.51■■□□□ 1.35
COL13A1-214ENST00000522165 LPAL2Q16609 132 aa23.51■■□□□ 1.35
COL13A1-214ENST00000522165 SLC35D3Q5M8T2 416 aa23.51■■□□□ 1.35
COL13A1-214ENST00000522165 SPANXN2Q5MJ10 180 aa23.51■■□□□ 1.35
COL13A1-214ENST00000522165 POMZP3Q6PJE2 187 aa23.51■■□□□ 1.35
COL13A1-214ENST00000522165 GHDCQ8N2G8 530 aa23.51■■□□□ 1.35
COL13A1-214ENST00000522165 ZNRF4Q8WWF5 429 aa23.51■■□□□ 1.35
COL13A1-214ENST00000522165 TBCCD1Q9NVR7 557 aa23.51■■□□□ 1.35
COL13A1-214ENST00000522165 BGLAPP02818 100 aa23.5■■□□□ 1.35
COL13A1-214ENST00000522165 GALP22466 123 aa23.5■■□□□ 1.35
COL13A1-214ENST00000522165 TNFSF8P32971 234 aa23.5■■□□□ 1.35
COL13A1-214ENST00000522165 RPL18Q07020 188 aaKnown RBP23.5■■□□□ 1.35
COL13A1-214ENST00000522165 NANOGNBQ7Z5D8 188 aa23.5■■□□□ 1.35
COL13A1-214ENST00000522165 MARCH9Q86YJ5 346 aa23.5■■□□□ 1.35
COL13A1-214ENST00000522165 MISPQ8IVT2 679 aa23.5■■□□□ 1.35
COL13A1-214ENST00000522165 AGBL5Q8NDL9 886 aa23.5■■□□□ 1.35
COL13A1-214ENST00000522165 OR8K3Q8NH51 312 aa23.5■■□□□ 1.35
COL13A1-214ENST00000522165 C8orf44Q96CB5 159 aa23.5■■□□□ 1.35
COL13A1-214ENST00000522165 C4orf36Q96KX1 117 aa23.5■■□□□ 1.35
COL13A1-214ENST00000522165 PLEKHB1Q9UF11 243 aaPredicted RBP23.5■■□□□ 1.35
COL13A1-214ENST00000522165 NOX1Q9Y5S8 564 aa23.5■■□□□ 1.35
COL13A1-214ENST00000522165 WDR87Q6ZQQ6 2873 aa23.5■■□□□ 1.35
COL13A1-214ENST00000522165 TRAV36DV7A0A075B6V5 113 aa23.5■■□□□ 1.35
COL13A1-214ENST00000522165 TMEM221A6NGB7 291 aa23.5■■□□□ 1.35
COL13A1-214ENST00000522165 M0R296 226 aa23.5■■□□□ 1.35
COL13A1-214ENST00000522165 PFDN1O60925 122 aa23.5■■□□□ 1.35
COL13A1-214ENST00000522165 CYC1P08574 325 aa23.5■■□□□ 1.35
COL13A1-214ENST00000522165 CDKN2AP42771 156 aaKnown RBP23.5■■□□□ 1.35
COL13A1-214ENST00000522165 POLR2HP52434 150 aaKnown RBP23.5■■□□□ 1.35
COL13A1-214ENST00000522165 ZNF800Q2TB10 664 aaPredicted RBP eCLIP23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms