RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 WDR60Q8WVS4 1066 aa12.98□□□□□ -0.33
PRKDC-204ENST00000521331 CCDC115Q96NT0 180 aa12.98□□□□□ -0.33
PRKDC-204ENST00000521331 ZNF317Q96PQ6 595 aaPredicted RBP12.98□□□□□ -0.33
PRKDC-204ENST00000521331 ROPN1BQ9BZX4 212 aaPredicted RBP12.98□□□□□ -0.33
PRKDC-204ENST00000521331 ADAM19Q9H013 955 aa12.98□□□□□ -0.33
PRKDC-204ENST00000521331 SLC38A1Q9H2H9 487 aa12.98□□□□□ -0.33
PRKDC-204ENST00000521331 MTHFD2LQ9H903 347 aaPredicted RBP12.98□□□□□ -0.33
PRKDC-204ENST00000521331 ROPN1Q9HAT0 212 aaPredicted RBP12.98□□□□□ -0.33
PRKDC-204ENST00000521331 CA10Q9NS85 328 aa12.98□□□□□ -0.33
PRKDC-204ENST00000521331 BTNL2Q9UIR0 455 aa12.98□□□□□ -0.33
PRKDC-204ENST00000521331 IGHV1-18A0A0C4DH31 117 aa12.97□□□□□ -0.33
PRKDC-204ENST00000521331 IGHV4-61A0A0C4DH41 118 aa12.97□□□□□ -0.33
PRKDC-204ENST00000521331 AQP7P3A6NL99 342 aa12.97□□□□□ -0.33
PRKDC-204ENST00000521331 ZNF587BE7ETH6 402 aa12.97□□□□□ -0.33
PRKDC-204ENST00000521331 E9PBE3 544 aa12.97□□□□□ -0.33
PRKDC-204ENST00000521331 KLF11O14901 512 aa12.97□□□□□ -0.33
PRKDC-204ENST00000521331 SNUPNO95149 360 aaKnown RBP12.97□□□□□ -0.33
PRKDC-204ENST00000521331 AKR7A3O95154 331 aa12.97□□□□□ -0.33
PRKDC-204ENST00000521331 VAMP5O95183 116 aa12.97□□□□□ -0.33
PRKDC-204ENST00000521331 CRYAAP02489 173 aa12.97□□□□□ -0.33
PRKDC-204ENST00000521331 SERPINE1P05121 402 aa12.97□□□□□ -0.33
PRKDC-204ENST00000521331 DBIP07108 87 aaKnown RBP12.97□□□□□ -0.33
PRKDC-204ENST00000521331 CHRM4P08173 479 aa12.97□□□□□ -0.33
PRKDC-204ENST00000521331 RPS4Y1P22090 263 aaKnown RBP12.97□□□□□ -0.33
PRKDC-204ENST00000521331 CXCR1P25024 350 aa12.97□□□□□ -0.33
PRKDC-204ENST00000521331 S100A3P33764 101 aa12.97□□□□□ -0.33
PRKDC-204ENST00000521331 ETV4P43268 484 aa12.97□□□□□ -0.33
PRKDC-204ENST00000521331 UBE2NP61088 152 aaKnown RBP12.97□□□□□ -0.33
PRKDC-204ENST00000521331 CEACAM7Q14002 265 aa12.97□□□□□ -0.33
PRKDC-204ENST00000521331 OR7A5Q15622 319 aa12.97□□□□□ -0.33
PRKDC-204ENST00000521331 SYPL1Q16563 259 aa12.97□□□□□ -0.33
PRKDC-204ENST00000521331 C3orf36Q3SXR2 165 aa12.97□□□□□ -0.33
PRKDC-204ENST00000521331 TBRG1Q3YBR2 411 aa12.97□□□□□ -0.33
PRKDC-204ENST00000521331 IQCCQ4KMZ1 466 aa12.97□□□□□ -0.33
PRKDC-204ENST00000521331 MRPL2Q5T653 305 aaKnown RBP12.97□□□□□ -0.33
PRKDC-204ENST00000521331 IL17RELQ6ZVW7 336 aa12.97□□□□□ -0.33
PRKDC-204ENST00000521331 KIRREL3Q8IZU9 778 aa12.97□□□□□ -0.33
PRKDC-204ENST00000521331 TMEM99Q8N816 258 aa12.97□□□□□ -0.33
PRKDC-204ENST00000521331 ZNF781Q8N8C0 355 aa12.97□□□□□ -0.33
PRKDC-204ENST00000521331 ANKFN1Q8N957 763 aa12.97□□□□□ -0.33
PRKDC-204ENST00000521331 C3orf49Q96BT1 292 aa12.97□□□□□ -0.33
PRKDC-204ENST00000521331 AURKBQ96GD4 344 aaPredicted RBP12.97□□□□□ -0.33
PRKDC-204ENST00000521331 FOXN4Q96NZ1 517 aa12.97□□□□□ -0.33
PRKDC-204ENST00000521331 ZNF385AQ96PM9 386 aaKnown RBP12.97□□□□□ -0.33
PRKDC-204ENST00000521331 VRK1Q99986 396 aaPredicted RBP12.97□□□□□ -0.33
PRKDC-204ENST00000521331 ITM2AO43736 263 aa12.96□□□□□ -0.33
PRKDC-204ENST00000521331 TYROBPO43914 113 aa12.96□□□□□ -0.33
PRKDC-204ENST00000521331 TGFAP01135 160 aa12.96□□□□□ -0.33
PRKDC-204ENST00000521331 ZNF23P17027 643 aa12.96□□□□□ -0.33
PRKDC-204ENST00000521331 PPOXP50336 477 aa12.96□□□□□ -0.33
PRKDC-204ENST00000521331 ABCE1P61221 599 aaKnown RBP12.96□□□□□ -0.33
PRKDC-204ENST00000521331 EFNB3Q15768 340 aa12.96□□□□□ -0.33
PRKDC-204ENST00000521331 FAM174BQ3ZCQ3 159 aa12.96□□□□□ -0.33
PRKDC-204ENST00000521331 LIPNQ5VXI9 398 aa12.96□□□□□ -0.33
PRKDC-204ENST00000521331 TMEM225Q6GV28 225 aa12.96□□□□□ -0.33
PRKDC-204ENST00000521331 SPATA19Q7Z5L4 167 aa12.96□□□□□ -0.33
PRKDC-204ENST00000521331 GPAT4Q86UL3 456 aa12.96□□□□□ -0.33
PRKDC-204ENST00000521331 PEX5LQ8IYB4 626 aa12.96□□□□□ -0.33
PRKDC-204ENST00000521331 OR1K1Q8NGR3 316 aa12.96□□□□□ -0.33
PRKDC-204ENST00000521331 MAGEE2Q8TD90 523 aaPredicted RBP12.96□□□□□ -0.33
PRKDC-204ENST00000521331 TAPBPLQ9BX59 468 aa12.96□□□□□ -0.33
PRKDC-204ENST00000521331 PLK3Q9H4B4 646 aa12.96□□□□□ -0.33
PRKDC-204ENST00000521331 CRNNQ9UBG3 495 aaPredicted RBP12.96□□□□□ -0.33
PRKDC-204ENST00000521331 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.96□□□□□ -0.33
PRKDC-204ENST00000521331 RAP2CQ9Y3L5 183 aa12.96□□□□□ -0.33
PRKDC-204ENST00000521331 YLPM1P49750 1951 aaKnown RBP12.95□□□□□ -0.34
PRKDC-204ENST00000521331 ARPC4-TTLL3A0A0A6YYG9 625 aa12.95□□□□□ -0.34
PRKDC-204ENST00000521331 CCDC154A6NI56 674 aa12.95□□□□□ -0.34
PRKDC-204ENST00000521331 A8MVM7 634 aa12.95□□□□□ -0.34
PRKDC-204ENST00000521331 LGI1O95970 557 aa12.95□□□□□ -0.34
PRKDC-204ENST00000521331 ERCC1P07992 297 aaPredicted RBP12.95□□□□□ -0.34
PRKDC-204ENST00000521331 OR4A8P0C604 315 aa12.95□□□□□ -0.34
PRKDC-204ENST00000521331 NR2F1P10589 423 aa12.95□□□□□ -0.34
PRKDC-204ENST00000521331 HOXB1P14653 301 aaPredicted RBP12.95□□□□□ -0.34
PRKDC-204ENST00000521331 CREB1P16220 341 aa12.95□□□□□ -0.34
PRKDC-204ENST00000521331 LBPP18428 481 aa12.95□□□□□ -0.34
PRKDC-204ENST00000521331 RPL14P50914 215 aaKnown RBP12.95□□□□□ -0.34
PRKDC-204ENST00000521331 COPZ1P61923 177 aa12.95□□□□□ -0.34
PRKDC-204ENST00000521331 NAAAQ02083 359 aa12.95□□□□□ -0.34
PRKDC-204ENST00000521331 LRRC74AQ0VAA2 488 aa12.95□□□□□ -0.34
PRKDC-204ENST00000521331 CHI3L2Q15782 390 aa12.95□□□□□ -0.34
PRKDC-204ENST00000521331 ADIPOQQ15848 244 aa12.95□□□□□ -0.34
PRKDC-204ENST00000521331 ANKRD16Q6P6B7 361 aa12.95□□□□□ -0.34
PRKDC-204ENST00000521331 FAM169BQ8N8A8 192 aa12.95□□□□□ -0.34
PRKDC-204ENST00000521331 ANKS4BQ8N8V4 417 aa12.95□□□□□ -0.34
PRKDC-204ENST00000521331 OR4F15Q8NGB8 312 aa12.95□□□□□ -0.34
PRKDC-204ENST00000521331 PKNOX2Q96KN3 472 aa12.95□□□□□ -0.34
PRKDC-204ENST00000521331 PANX1Q96RD7 426 aa12.95□□□□□ -0.34
PRKDC-204ENST00000521331 BPESC1Q9GZL8 116 aa12.95□□□□□ -0.34
PRKDC-204ENST00000521331 RAB1BQ9H0U4 201 aa12.95□□□□□ -0.34
PRKDC-204ENST00000521331 MALRD1Q5VYJ5 2156 aa12.95□□□□□ -0.34
PRKDC-204ENST00000521331 ARFGEF3Q5TH69 2177 aa12.94□□□□□ -0.34
PRKDC-204ENST00000521331 HEATR1Q9H583 2144 aaKnown RBP12.94□□□□□ -0.34
PRKDC-204ENST00000521331 A0A096LPI6 279 aa12.94□□□□□ -0.34
PRKDC-204ENST00000521331 VSTM5A8MXK1 200 aa12.94□□□□□ -0.34
PRKDC-204ENST00000521331 BIRC5O15392 142 aa12.94□□□□□ -0.34
PRKDC-204ENST00000521331 PGRP06401 933 aa12.94□□□□□ -0.34
PRKDC-204ENST00000521331 SELENOPP49908 381 aa12.94□□□□□ -0.34
PRKDC-204ENST00000521331 IDH3GP51553 393 aaPredicted RBP12.94□□□□□ -0.34
PRKDC-204ENST00000521331 P2RY4P51582 365 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms