RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 AGPAT2O15120 278 aa3.76□□□□□ -1.81
PTPN12-213ENST00000519553 ARPC3O15145 178 aa3.76□□□□□ -1.81
PTPN12-213ENST00000519553 OPN1MWP04001 364 aa3.76□□□□□ -1.81
PTPN12-213ENST00000519553 IGKV3-11P04433 115 aa3.76□□□□□ -1.81
PTPN12-213ENST00000519553 PCCAP05165 728 aaPredicted RBP3.76□□□□□ -1.81
PTPN12-213ENST00000519553 OPN1MW2P0DN77 364 aa3.76□□□□□ -1.81
PTPN12-213ENST00000519553 OPN1MW3P0DN78 364 aa3.76□□□□□ -1.81
PTPN12-213ENST00000519553 PSMA5P28066 241 aa3.76□□□□□ -1.81
PTPN12-213ENST00000519553 VDAC2P45880 294 aaPredicted RBP3.76□□□□□ -1.81
PTPN12-213ENST00000519553 EFNB2P52799 333 aa3.76□□□□□ -1.81
PTPN12-213ENST00000519553 VGLL4Q14135 290 aa3.76□□□□□ -1.81
PTPN12-213ENST00000519553 SLC15A2Q16348 729 aa3.76□□□□□ -1.81
PTPN12-213ENST00000519553 OR52E8Q6IFG1 317 aa3.76□□□□□ -1.81
PTPN12-213ENST00000519553 C6orf89Q6UWU4 347 aa3.76□□□□□ -1.81
PTPN12-213ENST00000519553 GMCL1P1Q8NEA9 526 aa3.76□□□□□ -1.81
PTPN12-213ENST00000519553 TRMT10AQ8TBZ6 339 aaKnown RBP3.76□□□□□ -1.81
PTPN12-213ENST00000519553 FANK1Q8TC84 345 aa3.76□□□□□ -1.81
PTPN12-213ENST00000519553 MARCH1Q8TCQ1 289 aa3.76□□□□□ -1.81
PTPN12-213ENST00000519553 EMG1Q92979 244 aaKnown RBP3.76□□□□□ -1.81
PTPN12-213ENST00000519553 EFHD2Q96C19 240 aaPredicted RBP3.76□□□□□ -1.81
PTPN12-213ENST00000519553 FCRL1Q96LA6 429 aa3.76□□□□□ -1.81
PTPN12-213ENST00000519553 RNF2Q99496 336 aa3.76□□□□□ -1.81
PTPN12-213ENST00000519553 MRPL45Q9BRJ2 306 aaKnown RBP3.76□□□□□ -1.81
PTPN12-213ENST00000519553 RBKSQ9H477 322 aa3.76□□□□□ -1.81
PTPN12-213ENST00000519553 SH3BGRL2Q9UJC5 107 aa3.76□□□□□ -1.81
PTPN12-213ENST00000519553 RAB26Q9ULW5 256 aa3.76□□□□□ -1.81
PTPN12-213ENST00000519553 TRAF3IP3Q9Y228 551 aa3.76□□□□□ -1.81
PTPN12-213ENST00000519553 RPL36Q9Y3U8 105 aaKnown RBP3.76□□□□□ -1.81
PTPN12-213ENST00000519553 MTCL1Q9Y4B5 1905 aaKnown RBP3.76□□□□□ -1.81
PTPN12-213ENST00000519553 IGHV3-64DA0A0J9YX35 117 aa3.75□□□□□ -1.81
PTPN12-213ENST00000519553 NKX2-6A6NCS4 301 aa3.75□□□□□ -1.81
PTPN12-213ENST00000519553 LOC110117498-PIK3R3F6TDL0 507 aa3.75□□□□□ -1.81
PTPN12-213ENST00000519553 HIP1O00291 1037 aa3.75□□□□□ -1.81
PTPN12-213ENST00000519553 RGS16O15492 202 aaPredicted RBP3.75□□□□□ -1.81
PTPN12-213ENST00000519553 PRKAB2O43741 272 aa3.75□□□□□ -1.81
PTPN12-213ENST00000519553 UGT1A9O60656 530 aa3.75□□□□□ -1.81
PTPN12-213ENST00000519553 AP2A1O95782 977 aa3.75□□□□□ -1.81
PTPN12-213ENST00000519553 CRISP2P16562 243 aa3.75□□□□□ -1.81
PTPN12-213ENST00000519553 DDOSTP39656 456 aa3.75□□□□□ -1.81
PTPN12-213ENST00000519553 QARSP47897 775 aaKnown RBP3.75□□□□□ -1.81
PTPN12-213ENST00000519553 TNFRSF17Q02223 184 aa3.75□□□□□ -1.81
PTPN12-213ENST00000519553 ASPHQ12797 758 aa3.75□□□□□ -1.81
PTPN12-213ENST00000519553 KLRB1Q12918 225 aa3.75□□□□□ -1.81
PTPN12-213ENST00000519553 EBI3Q14213 229 aa3.75□□□□□ -1.81
PTPN12-213ENST00000519553 PGAP1Q75T13 922 aa3.75□□□□□ -1.81
PTPN12-213ENST00000519553 ZNF571Q7Z3V5 609 aaPredicted RBP3.75□□□□□ -1.81
PTPN12-213ENST00000519553 SLC26A11Q86WA9 606 aa3.75□□□□□ -1.81
PTPN12-213ENST00000519553 TMEM61Q8N0U2 210 aa3.75□□□□□ -1.81
PTPN12-213ENST00000519553 NPBQ8NG41 125 aa3.75□□□□□ -1.81
PTPN12-213ENST00000519553 OR51G1Q8NGK1 321 aa3.75□□□□□ -1.81
PTPN12-213ENST00000519553 RLN3Q8WXF3 142 aa3.75□□□□□ -1.81
PTPN12-213ENST00000519553 NDRG1Q92597 394 aaKnown RBP3.75□□□□□ -1.81
PTPN12-213ENST00000519553 CMTM7Q96FZ5 175 aa3.75□□□□□ -1.81
PTPN12-213ENST00000519553 ERP44Q9BS26 406 aa3.75□□□□□ -1.81
PTPN12-213ENST00000519553 RAB34Q9BZG1 259 aa3.75□□□□□ -1.81
PTPN12-213ENST00000519553 RNF167Q9H6Y7 350 aa3.75□□□□□ -1.81
PTPN12-213ENST00000519553 CCL28Q9NRJ3 127 aa3.75□□□□□ -1.81
PTPN12-213ENST00000519553 FRMPD3Q5JV73 1810 aa3.74□□□□□ -1.81
PTPN12-213ENST00000519553 KIF16BQ96L93 1317 aa3.74□□□□□ -1.81
PTPN12-213ENST00000519553 IGLV3-16A0A075B6K0 115 aa3.74□□□□□ -1.81
PTPN12-213ENST00000519553 RSPH10B2B2RC85 870 aa3.74□□□□□ -1.81
PTPN12-213ENST00000519553 RSPH10BP0C881 870 aa3.74□□□□□ -1.81
PTPN12-213ENST00000519553 CSNK1DP48730 415 aa3.74□□□□□ -1.81
PTPN12-213ENST00000519553 ATP6AP1Q15904 470 aa3.74□□□□□ -1.81
PTPN12-213ENST00000519553 BOLA3Q53S33 107 aa3.74□□□□□ -1.81
PTPN12-213ENST00000519553 TFDP3Q5H9I0 405 aa3.74□□□□□ -1.81
PTPN12-213ENST00000519553 SAMD4BQ5PRF9 694 aaKnown RBP3.74□□□□□ -1.81
PTPN12-213ENST00000519553 ZNF786Q8N393 782 aa3.74□□□□□ -1.81
PTPN12-213ENST00000519553 PHF3Q92576 2039 aaKnown RBP3.74□□□□□ -1.81
PTPN12-213ENST00000519553 ITCHQ96J02 903 aa3.74□□□□□ -1.81
PTPN12-213ENST00000519553 TTC25Q96NG3 672 aa3.74□□□□□ -1.81
PTPN12-213ENST00000519553 SECISBP2Q96T21 854 aaKnown RBP3.74□□□□□ -1.81
PTPN12-213ENST00000519553 DEFB127Q9H1M4 99 aa3.74□□□□□ -1.81
PTPN12-213ENST00000519553 REEP4Q9H6H4 257 aa3.74□□□□□ -1.81
PTPN12-213ENST00000519553 QPCTLQ9NXS2 382 aa3.74□□□□□ -1.81
PTPN12-213ENST00000519553 HOXC10Q9NYD6 342 aa3.74□□□□□ -1.81
PTPN12-213ENST00000519553 EPS15L1Q9UBC2 864 aa3.74□□□□□ -1.81
PTPN12-213ENST00000519553 SCN2AQ99250 2005 aa3.73□□□□□ -1.81
PTPN12-213ENST00000519553 NSG1A0A0A6YYJ2 146 aa3.73□□□□□ -1.81
PTPN12-213ENST00000519553 RAMP3O60896 148 aa3.73□□□□□ -1.81
PTPN12-213ENST00000519553 DIRAS1O95057 198 aa3.73□□□□□ -1.81
PTPN12-213ENST00000519553 GIPP09681 153 aaPredicted RBP3.73□□□□□ -1.81
PTPN12-213ENST00000519553 PCMT1P22061 227 aa3.73□□□□□ -1.81
PTPN12-213ENST00000519553 GLP1RP43220 463 aa3.73□□□□□ -1.81
PTPN12-213ENST00000519553 LRRC63Q05C16 580 aa3.73□□□□□ -1.81
PTPN12-213ENST00000519553 PSG5Q15238 335 aa3.73□□□□□ -1.81
PTPN12-213ENST00000519553 MICBQ29980 383 aa3.73□□□□□ -1.81
PTPN12-213ENST00000519553 NLRP9Q7RTR0 991 aa3.73□□□□□ -1.81
PTPN12-213ENST00000519553 CCDC50Q8IVM0 306 aa3.73□□□□□ -1.81
PTPN12-213ENST00000519553 TMEM158Q8WZ71 300 aa3.73□□□□□ -1.81
PTPN12-213ENST00000519553 FAM210BQ96KR6 192 aa3.73□□□□□ -1.81
PTPN12-213ENST00000519553 OXGR1Q96P68 337 aa3.73□□□□□ -1.81
PTPN12-213ENST00000519553 CLCF1Q9UBD9 225 aa3.73□□□□□ -1.81
PTPN12-213ENST00000519553 SEC14L3Q9UDX4 400 aa3.73□□□□□ -1.81
PTPN12-213ENST00000519553 A0A0G2JN53 185 aa3.72□□□□□ -1.81
PTPN12-213ENST00000519553 SNAI2O43623 268 aa3.72□□□□□ -1.81
PTPN12-213ENST00000519553 ATP5LO75964 103 aa3.72□□□□□ -1.81
PTPN12-213ENST00000519553 KLK3P07288 261 aaPredicted RBP3.72□□□□□ -1.81
PTPN12-213ENST00000519553 HMGB2P26583 209 aaKnown RBP3.72□□□□□ -1.81
PTPN12-213ENST00000519553 BTCP35070 178 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms