RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 ERGIC3Q9Y282 383 aa13.15□□□□□ -0.31
CLN8-204ENST00000519254 TP53I11O14683 189 aa13.14□□□□□ -0.31
CLN8-204ENST00000519254 OR7A10O76100 309 aa13.14□□□□□ -0.31
CLN8-204ENST00000519254 PPP1R3DO95685 299 aa13.14□□□□□ -0.31
CLN8-204ENST00000519254 IGF2P01344 180 aa13.14□□□□□ -0.31
CLN8-204ENST00000519254 HSMCR30P0CW71 290 aa13.14□□□□□ -0.31
CLN8-204ENST00000519254 TACR3P29371 465 aa13.14□□□□□ -0.31
CLN8-204ENST00000519254 SLC9A3P48764 834 aa13.14□□□□□ -0.31
CLN8-204ENST00000519254 RGS6P49758 472 aa13.14□□□□□ -0.31
CLN8-204ENST00000519254 ETV1P50549 477 aa13.14□□□□□ -0.31
CLN8-204ENST00000519254 LSM3P62310 102 aaKnown RBP13.14□□□□□ -0.31
CLN8-204ENST00000519254 ROR2Q01974 943 aaKnown RBP13.14□□□□□ -0.31
CLN8-204ENST00000519254 EGR4Q05215 589 aa13.14□□□□□ -0.31
CLN8-204ENST00000519254 TMEM44Q2T9K0 475 aa13.14□□□□□ -0.31
CLN8-204ENST00000519254 DEFB109BQ30KR1 87 aa13.14□□□□□ -0.31
CLN8-204ENST00000519254 ABHD17BQ5VST6 288 aa13.14□□□□□ -0.31
CLN8-204ENST00000519254 PRAMEF20Q5VT98 475 aa13.14□□□□□ -0.31
CLN8-204ENST00000519254 OR5M10Q6IEU7 315 aa13.14□□□□□ -0.31
CLN8-204ENST00000519254 LINC00696Q6ZRV3 163 aa13.14□□□□□ -0.31
CLN8-204ENST00000519254 CXXC5Q7LFL8 322 aaKnown RBP13.14□□□□□ -0.31
CLN8-204ENST00000519254 ARMC10Q8N2F6 343 aa13.14□□□□□ -0.31
CLN8-204ENST00000519254 SLC43A2Q8N370 569 aa13.14□□□□□ -0.31
CLN8-204ENST00000519254 PROKR2Q8NFJ6 384 aa13.14□□□□□ -0.31
CLN8-204ENST00000519254 OR5W2Q8NH69 310 aa13.14□□□□□ -0.31
CLN8-204ENST00000519254 DCBLD2Q96PD2 775 aa13.14□□□□□ -0.31
CLN8-204ENST00000519254 HCAR1Q9BXC0 346 aa13.14□□□□□ -0.31
CLN8-204ENST00000519254 MED20Q9H944 212 aa13.14□□□□□ -0.31
CLN8-204ENST00000519254 C12orf10Q9HB07 376 aa13.14□□□□□ -0.31
CLN8-204ENST00000519254 BAIAP2Q9UQB8 552 aa13.14□□□□□ -0.31
CLN8-204ENST00000519254 IRGMA1A4Y4 181 aa13.13□□□□□ -0.31
CLN8-204ENST00000519254 HTR3EA5X5Y0 456 aa13.13□□□□□ -0.31
CLN8-204ENST00000519254 SLC22A1O15245 554 aa13.13□□□□□ -0.31
CLN8-204ENST00000519254 WISP1O95388 367 aa13.13□□□□□ -0.31
CLN8-204ENST00000519254 BCL10O95999 233 aa13.13□□□□□ -0.31
CLN8-204ENST00000519254 GADD45AP24522 165 aa13.13□□□□□ -0.31
CLN8-204ENST00000519254 ITPKBP27987 946 aa13.13□□□□□ -0.31
CLN8-204ENST00000519254 HTR1FP30939 366 aa13.13□□□□□ -0.31
CLN8-204ENST00000519254 SLC6A6P31641 620 aa13.13□□□□□ -0.31
CLN8-204ENST00000519254 VBP1P61758 197 aa13.13□□□□□ -0.31
CLN8-204ENST00000519254 OC90Q02509 493 aaPredicted RBP13.13□□□□□ -0.31
CLN8-204ENST00000519254 PLBD1Q6P4A8 553 aa13.13□□□□□ -0.31
CLN8-204ENST00000519254 C19orf48Q6RUI8 117 aa13.13□□□□□ -0.31
CLN8-204ENST00000519254 SNIP1Q8TAD8 396 aaKnown RBP13.13□□□□□ -0.31
CLN8-204ENST00000519254 DUSP19Q8WTR2 217 aa13.13□□□□□ -0.31
CLN8-204ENST00000519254 PTP4A1Q93096 173 aa13.13□□□□□ -0.31
CLN8-204ENST00000519254 OPALINQ96PE5 141 aa13.13□□□□□ -0.31
CLN8-204ENST00000519254 MND1Q9BWT6 205 aa13.13□□□□□ -0.31
CLN8-204ENST00000519254 CCDC86Q9H6F5 360 aaKnown RBP13.13□□□□□ -0.31
CLN8-204ENST00000519254 ZNF337Q9Y3M9 751 aa13.13□□□□□ -0.31
CLN8-204ENST00000519254 CHCHD2Q9Y6H1 151 aaPredicted RBP13.13□□□□□ -0.31
CLN8-204ENST00000519254 G3V3Y1 287 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 EFSO43281 561 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 NDUFB2O95178 105 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 NUDT14O95848 222 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 ADRB1P08588 477 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 CCL3P10147 92 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 PEPDP12955 493 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 P2RX1P51575 399 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 NCS1P62166 190 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 RPS4XP62701 263 aaKnown RBP13.12□□□□□ -0.31
CLN8-204ENST00000519254 SPHARQ15513 63 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 NIPAL3Q6P499 406 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 SHFQ7M4L6 423 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 NDNFQ8TB73 568 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 GPR119Q8TDV5 335 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 RNF138Q8WVD3 245 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 LIPHQ8WWY8 451 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 H2AFY2Q9P0M6 372 aaPredicted RBP13.12□□□□□ -0.31
CLN8-204ENST00000519254 ABI3Q9P2A4 366 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 CHRNA9Q9UGM1 479 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 OSGIN1Q9UJX0 560 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 EXOGQ9Y2C4 368 aaKnown RBP13.12□□□□□ -0.31
CLN8-204ENST00000519254 DOCK10Q96BY6 2186 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 MCIDASD6RGH6 385 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 HK1P19367 917 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 PGCP20142 388 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 TGFBR1P36897 503 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 CASP3P42574 277 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 CCL11P51671 97 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 LTBQ06643 244 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 DBPQ10586 325 aaPredicted RBP13.12□□□□□ -0.31
CLN8-204ENST00000519254 ITGADQ13349 1161 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 CBFBQ13951 182 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 SSX1Q16384 188 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 ZNF74Q16587 644 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 TSTQ16762 297 aaKnown RBP13.12□□□□□ -0.31
CLN8-204ENST00000519254 GXYLT1Q4G148 440 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 MEPCEQ7L2J0 689 aaKnown RBP13.12□□□□□ -0.31
CLN8-204ENST00000519254 MDGA2Q7Z553 956 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 ATCAYQ86WG3 371 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 GID4Q8IVV7 300 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 SLC37A3Q8NCC5 494 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 OR4F15Q8NGB8 312 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 B4GALNT2Q8NHY0 566 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 OTULINQ96BN8 352 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 MOGAT1Q96PD6 335 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 TIMMDC1Q9NPL8 285 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 PPP4R1LQ9P1A2 415 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 PIEZO1Q92508 2521 aa13.12□□□□□ -0.31
CLN8-204ENST00000519254 ASPMQ8IZT6 3477 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms