RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 FAM3CQ92520 227 aa15.2■□□□□ 0.02
PCDHGA11-202ENST00000518882 SLC22A18Q96BI1 424 aa15.2■□□□□ 0.02
PCDHGA11-202ENST00000518882 CTHRC1Q96CG8 243 aa15.2■□□□□ 0.02
PCDHGA11-202ENST00000518882 NMNAT3Q96T66 252 aa15.2■□□□□ 0.02
PCDHGA11-202ENST00000518882 CLEC4MQ9H2X3 399 aaPredicted RBP15.2■□□□□ 0.02
PCDHGA11-202ENST00000518882 ENTPD2Q9Y5L3 495 aa15.2■□□□□ 0.02
PCDHGA11-202ENST00000518882 B8ZZF3 427 aa15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 NKX2-2O95096 273 aa15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 AK1P00568 194 aa15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 IFNA7P01567 189 aa15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 TYRP1P17643 537 aa15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 DPP4P27487 766 aa15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 RBM34P42696 430 aaKnown RBP15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 LSSP48449 732 aa15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 BLVRAP53004 296 aa15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 NANOS3P60323 173 aaKnown RBP15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 KIR2DS3Q14952 304 aa15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 CLLU1Q5K131 121 aa15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 KIRREL2Q6UWL6 708 aa15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 FTMTQ8N4E7 242 aa15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 CAMKVQ8NCB2 501 aa15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 OR2T4Q8NH00 348 aa15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 OR14A16Q8NHC5 309 aa15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 HMGB4Q8WW32 186 aa15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 DDOQ99489 341 aa15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 PRDM9Q9NQV7 894 aa15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 UBQLN2Q9UHD9 624 aa15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 FBXL21Q9UKT6 434 aa15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 ATG2AQ2TAZ0 1938 aa15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 IFITM5A6NNB3 132 aa15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 NDUFB2O95178 105 aa15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 GRPRP30550 384 aa15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 ACTR1BP42025 376 aa15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 ACTR1AP61163 376 aa15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 RPS15P62841 145 aaKnown RBP15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 PSG6Q00889 435 aa15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 SRSF5Q13243 272 aaKnown RBP15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 GRK1Q15835 563 aa15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 FAAP20Q6NZ36 180 aa15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 LINC00114Q6XXX2 140 aa15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 FCRLAQ7L513 359 aa15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 ZNF433Q8N7K0 673 aaPredicted RBP15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 NPEPL1Q8NDH3 523 aa15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 RGP1Q92546 391 aaPredicted RBP15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 MYADMQ96S97 322 aa15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 CHIAQ9BZP6 476 aa15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 PLEKHA1Q9HB21 404 aa15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 ZNF275Q9NSD4 429 aaPredicted RBP15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 SPEF1Q9Y4P9 236 aa15.19■□□□□ 0.02
PCDHGA11-202ENST00000518882 OR6C74A6NCV1 312 aa15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 OR6C68A6NDL8 312 aa15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 ZNF749O43361 778 aa15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 HRGP04196 525 aa15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 APODP05090 189 aa15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 PSMB1P20618 241 aaKnown RBP15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 ZNF10P21506 573 aaPredicted RBP15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 LCN1P31025 176 aa15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 DIO1P49895 249 aa15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 RPL6Q02878 288 aaKnown RBP15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 GAS6Q14393 721 aa15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 NDUFAF6Q330K2 333 aa15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 LSMEM1Q8N8F7 131 aa15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 RNF166Q96A37 237 aaPredicted RBP15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 ANKRD9Q96BM1 317 aaPredicted RBP15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 ZFYVE21Q9BQ24 234 aa15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 SEC22CQ9BRL7 303 aa15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 GPR174Q9BXC1 333 aa15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 RBCK1Q9BYM8 510 aa15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 LIN7BQ9HAP6 207 aa15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 STARD5Q9NSY2 213 aa15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 ACTR10Q9NZ32 417 aa15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 COQ3Q9NZJ6 369 aa15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 PPIEQ9UNP9 301 aaKnown RBP15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 COL4A2P08572 1712 aa15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 C4orf47A7E2U8 309 aa15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 ZNF879B4DU55 563 aa15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 AIPO00170 330 aa15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 ARPC1BO15143 372 aaKnown RBP15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 TGM6O95932 706 aa15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 CD1AP06126 327 aa15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 SPI1P17947 270 aa15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 RAD52P43351 418 aa15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 GPR18Q14330 331 aa15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 PON3Q15166 354 aa15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 AANATQ16613 207 aa15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 FAM69AQ5T7M9 428 aa15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 APOOLQ6UXV4 268 aa15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 GRAMD2AQ8IUY3 354 aa15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 OR6K6Q8NGW6 343 aa15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 RASD2Q96D21 266 aa15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 HSPA12BQ96MM6 686 aa15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 C1QTNF7Q9BXJ2 289 aa15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 TRIM2Q9C040 744 aa15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 TWSG1Q9GZX9 223 aa15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 NPDC1Q9NQX5 325 aaPredicted RBP15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 NANSQ9NR45 359 aa15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 CA10Q9NS85 328 aa15.18■□□□□ 0.02
PCDHGA11-202ENST00000518882 TEX51A0A1B0GUA7 166 aa15.17■□□□□ 0.02
PCDHGA11-202ENST00000518882 FAM171A2A8MVW0 826 aa15.17■□□□□ 0.02
PCDHGA11-202ENST00000518882 ZFPL1O95159 310 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms