RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 NOSIPQ9Y314 301 aaKnown RBP11.76□□□□□ -0.53
VEGFA-219ENST00000518824 RAI1Q7Z5J4 1906 aaPredicted RBP11.76□□□□□ -0.53
VEGFA-219ENST00000518824 PRRC2AP48634 2157 aaKnown RBP11.75□□□□□ -0.53
VEGFA-219ENST00000518824 A0A0B4J2E0 115 aa11.75□□□□□ -0.53
VEGFA-219ENST00000518824 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.75□□□□□ -0.53
VEGFA-219ENST00000518824 A0A1B0GX12 115 aa11.75□□□□□ -0.53
VEGFA-219ENST00000518824 PRORSD1PA6NEY8 169 aa11.75□□□□□ -0.53
VEGFA-219ENST00000518824 AQP7P3A6NL99 342 aa11.75□□□□□ -0.53
VEGFA-219ENST00000518824 ELOA3DA6NLF2 546 aaPredicted RBP11.75□□□□□ -0.53
VEGFA-219ENST00000518824 BBIP1A8MTZ0 92 aa11.75□□□□□ -0.53
VEGFA-219ENST00000518824 LRRN3E7EW58 273 aa11.75□□□□□ -0.53
VEGFA-219ENST00000518824 AIM2O14862 343 aa11.75□□□□□ -0.53
VEGFA-219ENST00000518824 SHOX2O60902 331 aaPredicted RBP11.75□□□□□ -0.53
VEGFA-219ENST00000518824 SERPINB7O75635 380 aa11.75□□□□□ -0.53
VEGFA-219ENST00000518824 GPIP06744 558 aa11.75□□□□□ -0.53
VEGFA-219ENST00000518824 MAP2K6P52564 334 aa11.75□□□□□ -0.53
VEGFA-219ENST00000518824 CDH12P55289 794 aa11.75□□□□□ -0.53
VEGFA-219ENST00000518824 MAPRE2Q15555 327 aa11.75□□□□□ -0.53
VEGFA-219ENST00000518824 TAB1Q15750 504 aa11.75□□□□□ -0.53
VEGFA-219ENST00000518824 ELOA3BQ3SY89 546 aa11.75□□□□□ -0.53
VEGFA-219ENST00000518824 ALG10BQ5I7T1 473 aa11.75□□□□□ -0.53
VEGFA-219ENST00000518824 C9orf135Q5VTT2 229 aa11.75□□□□□ -0.53
VEGFA-219ENST00000518824 Q6ZT83 130 aa11.75□□□□□ -0.53
VEGFA-219ENST00000518824 CCDC80Q76M96 950 aa11.75□□□□□ -0.53
VEGFA-219ENST00000518824 BHLHA15Q7RTS1 189 aaPredicted RBP11.75□□□□□ -0.53
VEGFA-219ENST00000518824 ZNF100Q8IYN0 542 aa11.75□□□□□ -0.53
VEGFA-219ENST00000518824 ELOA3Q8NG57 546 aa11.75□□□□□ -0.53
VEGFA-219ENST00000518824 OR9K2Q8NGE7 335 aa11.75□□□□□ -0.53
VEGFA-219ENST00000518824 OR8J3Q8NGG0 315 aa11.75□□□□□ -0.53
VEGFA-219ENST00000518824 RNF217Q8TC41 542 aa11.75□□□□□ -0.53
VEGFA-219ENST00000518824 STK35Q8TDR2 534 aa11.75□□□□□ -0.53
VEGFA-219ENST00000518824 MCHR1Q99705 422 aa11.75□□□□□ -0.53
VEGFA-219ENST00000518824 ECSITQ9BQ95 431 aa11.75□□□□□ -0.53
VEGFA-219ENST00000518824 TACO1Q9BSH4 297 aaKnown RBP11.75□□□□□ -0.53
VEGFA-219ENST00000518824 NAA11Q9BSU3 229 aaPredicted RBP11.75□□□□□ -0.53
VEGFA-219ENST00000518824 MYLK2Q9H1R3 596 aa11.75□□□□□ -0.53
VEGFA-219ENST00000518824 ZNF226Q9NYT6 803 aa11.75□□□□□ -0.53
VEGFA-219ENST00000518824 RPS6KB2Q9UBS0 482 aa11.75□□□□□ -0.53
VEGFA-219ENST00000518824 CPSF4LA6NMK7 179 aaKnown RBP11.74□□□□□ -0.53
VEGFA-219ENST00000518824 SNX3O60493 162 aa11.74□□□□□ -0.53
VEGFA-219ENST00000518824 EIF1BO60739 113 aaKnown RBP11.74□□□□□ -0.53
VEGFA-219ENST00000518824 ATE1O95260 518 aa11.74□□□□□ -0.53
VEGFA-219ENST00000518824 AHSA1O95433 338 aa11.74□□□□□ -0.53
VEGFA-219ENST00000518824 PNMTP11086 282 aa11.74□□□□□ -0.53
VEGFA-219ENST00000518824 COX5AP20674 150 aa11.74□□□□□ -0.53
VEGFA-219ENST00000518824 FUT4P22083 530 aa11.74□□□□□ -0.53
VEGFA-219ENST00000518824 IL32P24001 234 aa11.74□□□□□ -0.53
VEGFA-219ENST00000518824 FAPQ12884 760 aa11.74□□□□□ -0.53
VEGFA-219ENST00000518824 ITGADQ13349 1161 aa11.74□□□□□ -0.53
VEGFA-219ENST00000518824 TSPO2Q5TGU0 170 aa11.74□□□□□ -0.53
VEGFA-219ENST00000518824 FBXW9Q5XUX1 488 aa11.74□□□□□ -0.53
VEGFA-219ENST00000518824 PAMR1Q6UXH9 720 aa11.74□□□□□ -0.53
VEGFA-219ENST00000518824 CASP12Q6UXS9 341 aa11.74□□□□□ -0.53
VEGFA-219ENST00000518824 GPAT4Q86UL3 456 aa11.74□□□□□ -0.53
VEGFA-219ENST00000518824 EPHX4Q8IUS5 362 aa11.74□□□□□ -0.53
VEGFA-219ENST00000518824 WDFY1Q8IWB7 410 aa11.74□□□□□ -0.53
VEGFA-219ENST00000518824 SLC15A3Q8IY34 581 aa11.74□□□□□ -0.53
VEGFA-219ENST00000518824 ZNF433Q8N7K0 673 aaPredicted RBP11.74□□□□□ -0.53
VEGFA-219ENST00000518824 RP9Q8TA86 221 aaKnown RBP11.74□□□□□ -0.53
VEGFA-219ENST00000518824 KISS1RQ969F8 398 aaPredicted RBP11.74□□□□□ -0.53
VEGFA-219ENST00000518824 SLC38A4Q969I6 547 aa11.74□□□□□ -0.53
VEGFA-219ENST00000518824 APH1AQ96BI3 265 aa11.74□□□□□ -0.53
VEGFA-219ENST00000518824 PLPPR2Q96GM1 343 aa11.74□□□□□ -0.53
VEGFA-219ENST00000518824 TRIM2Q9C040 744 aa11.74□□□□□ -0.53
VEGFA-219ENST00000518824 SLC7A10Q9NS82 523 aa11.74□□□□□ -0.53
VEGFA-219ENST00000518824 EMC3Q9P0I2 261 aa11.74□□□□□ -0.53
VEGFA-219ENST00000518824 TESQ9UGI8 421 aaKnown RBP11.74□□□□□ -0.53
VEGFA-219ENST00000518824 A0A087WUJ7 227 aa11.73□□□□□ -0.53
VEGFA-219ENST00000518824 A0A1W2PR80 420 aa11.73□□□□□ -0.53
VEGFA-219ENST00000518824 ENO4A6NNW6 628 aa11.73□□□□□ -0.53
VEGFA-219ENST00000518824 M0R082 166 aa11.73□□□□□ -0.53
VEGFA-219ENST00000518824 NME4O00746 187 aa11.73□□□□□ -0.53
VEGFA-219ENST00000518824 SLC22A2O15244 555 aa11.73□□□□□ -0.53
VEGFA-219ENST00000518824 MRPL33O75394 65 aaKnown RBP11.73□□□□□ -0.53
VEGFA-219ENST00000518824 RAD51DO75771 328 aa11.73□□□□□ -0.53
VEGFA-219ENST00000518824 HPRP00739 348 aa11.73□□□□□ -0.53
VEGFA-219ENST00000518824 NPPAP01160 153 aa11.73□□□□□ -0.53
VEGFA-219ENST00000518824 ITGA5P08648 1049 aa11.73□□□□□ -0.53
VEGFA-219ENST00000518824 ROS1P08922 2347 aa11.73□□□□□ -0.53
VEGFA-219ENST00000518824 GRPRP30550 384 aa11.73□□□□□ -0.53
VEGFA-219ENST00000518824 ART1P52961 327 aa11.73□□□□□ -0.53
VEGFA-219ENST00000518824 NCALDP61601 193 aa11.73□□□□□ -0.53
VEGFA-219ENST00000518824 GNGT1P63211 74 aa11.73□□□□□ -0.53
VEGFA-219ENST00000518824 P2RY6Q15077 328 aa11.73□□□□□ -0.53
VEGFA-219ENST00000518824 ENTPD8Q5MY95 495 aa11.73□□□□□ -0.53
VEGFA-219ENST00000518824 C8orf82Q6P1X6 216 aaPredicted RBP11.73□□□□□ -0.53
VEGFA-219ENST00000518824 ULK3Q6PHR2 472 aa11.73□□□□□ -0.53
VEGFA-219ENST00000518824 CREB3L2Q70SY1 520 aa11.73□□□□□ -0.53
VEGFA-219ENST00000518824 PATL1Q86TB9 770 aaKnown RBP11.73□□□□□ -0.53
VEGFA-219ENST00000518824 UBE2J2Q8N2K1 259 aa11.73□□□□□ -0.53
VEGFA-219ENST00000518824 PCYOX1LQ8NBM8 494 aa11.73□□□□□ -0.53
VEGFA-219ENST00000518824 STEAP2Q8NFT2 490 aa11.73□□□□□ -0.53
VEGFA-219ENST00000518824 MFSD8Q8NHS3 518 aa11.73□□□□□ -0.53
VEGFA-219ENST00000518824 ZNF417Q8TAU3 575 aa11.73□□□□□ -0.53
VEGFA-219ENST00000518824 NEUROG1Q92886 237 aa11.73□□□□□ -0.53
VEGFA-219ENST00000518824 MOGAT1Q96PD6 335 aa11.73□□□□□ -0.53
VEGFA-219ENST00000518824 ZNF587Q96SQ5 575 aaPredicted RBP11.73□□□□□ -0.53
VEGFA-219ENST00000518824 TAPBPLQ9BX59 468 aa11.73□□□□□ -0.53
VEGFA-219ENST00000518824 C12orf10Q9HB07 376 aa11.73□□□□□ -0.53
VEGFA-219ENST00000518824 TMEM27Q9HBJ8 222 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms