RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 CDH9Q9ULB4 789 aa2.99□□□□□ -1.93
SQLE-202ENST00000518604 STAP1Q9ULZ2 295 aa2.99□□□□□ -1.93
SQLE-202ENST00000518604 PLEKHH1Q9ULM0 1364 aa2.99□□□□□ -1.93
SQLE-202ENST00000518604 FANCIQ9NVI1 1328 aa2.98□□□□□ -1.93
SQLE-202ENST00000518604 IQANK1A0A1B0GTG1 560 aa2.98□□□□□ -1.93
SQLE-202ENST00000518604 CLRN2A0PK11 232 aa2.98□□□□□ -1.93
SQLE-202ENST00000518604 CCDC182A6NF36 153 aa2.98□□□□□ -1.93
SQLE-202ENST00000518604 A8MXQ7 604 aa2.98□□□□□ -1.93
SQLE-202ENST00000518604 KRTAP4-16G5E9R7 235 aaPredicted RBP2.98□□□□□ -1.93
SQLE-202ENST00000518604 RGS16O15492 202 aaPredicted RBP2.98□□□□□ -1.93
SQLE-202ENST00000518604 MED7O43513 233 aa2.98□□□□□ -1.93
SQLE-202ENST00000518604 NPIPB7O75200 414 aa2.98□□□□□ -1.93
SQLE-202ENST00000518604 MTX2O75431 263 aa2.98□□□□□ -1.93
SQLE-202ENST00000518604 ATP5LO75964 103 aa2.98□□□□□ -1.93
SQLE-202ENST00000518604 DIRAS1O95057 198 aa2.98□□□□□ -1.93
SQLE-202ENST00000518604 IGHV4-34P06331 123 aa2.98□□□□□ -1.93
SQLE-202ENST00000518604 ATP6V1B2P21281 511 aa2.98□□□□□ -1.93
SQLE-202ENST00000518604 CCR1P32246 355 aa2.98□□□□□ -1.93
SQLE-202ENST00000518604 CTRLP40313 264 aa2.98□□□□□ -1.93
SQLE-202ENST00000518604 DUSP3P51452 185 aaPredicted RBP2.98□□□□□ -1.93
SQLE-202ENST00000518604 OXA1LQ15070 435 aa2.98□□□□□ -1.93
SQLE-202ENST00000518604 NRF1Q16656 503 aa2.98□□□□□ -1.93
SQLE-202ENST00000518604 ZNF630Q2M218 657 aaPredicted RBP2.98□□□□□ -1.93
SQLE-202ENST00000518604 CARD16Q5EG05 197 aa2.98□□□□□ -1.93
SQLE-202ENST00000518604 OR52E8Q6IFG1 317 aa2.98□□□□□ -1.93
SQLE-202ENST00000518604 ZSCAN25Q6NSZ9 544 aa2.98□□□□□ -1.93
SQLE-202ENST00000518604 ZNF530Q6P9A1 599 aaPredicted RBP2.98□□□□□ -1.93
SQLE-202ENST00000518604 ZNF571Q7Z3V5 609 aaPredicted RBP2.98□□□□□ -1.93
SQLE-202ENST00000518604 SLC34A3Q8N130 599 aa2.98□□□□□ -1.93
SQLE-202ENST00000518604 PNKDQ8N490 385 aa2.98□□□□□ -1.93
SQLE-202ENST00000518604 MFSD9Q8NBP5 474 aa2.98□□□□□ -1.93
SQLE-202ENST00000518604 OR6C4Q8NGE1 309 aa2.98□□□□□ -1.93
SQLE-202ENST00000518604 ZNF799Q96GE5 643 aa2.98□□□□□ -1.93
SQLE-202ENST00000518604 KCNA7Q96RP8 456 aa2.98□□□□□ -1.93
SQLE-202ENST00000518604 MBOAT4Q96T53 435 aa2.98□□□□□ -1.93
SQLE-202ENST00000518604 RNF2Q99496 336 aa2.98□□□□□ -1.93
SQLE-202ENST00000518604 TSG101Q99816 390 aa2.98□□□□□ -1.93
SQLE-202ENST00000518604 CAPS2Q9BXY5 557 aa2.98□□□□□ -1.93
SQLE-202ENST00000518604 VCX2Q9H322 139 aa2.98□□□□□ -1.93
SQLE-202ENST00000518604 IL26Q9NPH9 171 aa2.98□□□□□ -1.93
SQLE-202ENST00000518604 TRAF3IP3Q9Y228 551 aa2.98□□□□□ -1.93
SQLE-202ENST00000518604 N6AMT1Q9Y5N5 214 aa2.98□□□□□ -1.93
SQLE-202ENST00000518604 TCRBV9S1A1TA0A576 114 aa2.97□□□□□ -1.93
SQLE-202ENST00000518604 GJE1A6NN92 205 aa2.97□□□□□ -1.93
SQLE-202ENST00000518604 E9PBE3 544 aa2.97□□□□□ -1.93
SQLE-202ENST00000518604 AGPAT2O15120 278 aa2.97□□□□□ -1.93
SQLE-202ENST00000518604 RAMP3O60896 148 aa2.97□□□□□ -1.93
SQLE-202ENST00000518604 CLDN9O95484 217 aa2.97□□□□□ -1.93
SQLE-202ENST00000518604 ZNF17P17021 662 aa2.97□□□□□ -1.93
SQLE-202ENST00000518604 TBPP20226 339 aa2.97□□□□□ -1.93
SQLE-202ENST00000518604 CXCR2P25025 360 aa2.97□□□□□ -1.93
SQLE-202ENST00000518604 HMGB2P26583 209 aaKnown RBP2.97□□□□□ -1.93
SQLE-202ENST00000518604 NUDT1P36639 197 aa2.97□□□□□ -1.93
SQLE-202ENST00000518604 QARSP47897 775 aaKnown RBP2.97□□□□□ -1.93
SQLE-202ENST00000518604 CSNK1DP48730 415 aa2.97□□□□□ -1.93
SQLE-202ENST00000518604 GPM6AP51674 278 aa2.97□□□□□ -1.93
SQLE-202ENST00000518604 ARFIP1P53367 373 aa2.97□□□□□ -1.93
SQLE-202ENST00000518604 KRTAP12-2P59991 146 aa2.97□□□□□ -1.93
SQLE-202ENST00000518604 PRPS1P60891 318 aa2.97□□□□□ -1.93
SQLE-202ENST00000518604 CHIT1Q13231 466 aa2.97□□□□□ -1.93
SQLE-202ENST00000518604 ATP6AP1Q15904 470 aa2.97□□□□□ -1.93
SQLE-202ENST00000518604 FILIP1LQ4L180 1135 aa2.97□□□□□ -1.93
SQLE-202ENST00000518604 MARCH8Q5T0T0 291 aa2.97□□□□□ -1.93
SQLE-202ENST00000518604 OR2G6Q5TZ20 316 aa2.97□□□□□ -1.93
SQLE-202ENST00000518604 UTS2BQ765I0 119 aa2.97□□□□□ -1.93
SQLE-202ENST00000518604 LRRC75A-AS1Q8N1F1 130 aa2.97□□□□□ -1.93
SQLE-202ENST00000518604 BLOC1S5Q8TDH9 187 aa2.97□□□□□ -1.93
SQLE-202ENST00000518604 UFD1Q92890 307 aa2.97□□□□□ -1.93
SQLE-202ENST00000518604 FGF11Q92914 225 aa2.97□□□□□ -1.93
SQLE-202ENST00000518604 CXorf40BQ96DE9 158 aa2.97□□□□□ -1.93
SQLE-202ENST00000518604 SLC38A2Q96QD8 506 aa2.97□□□□□ -1.93
SQLE-202ENST00000518604 OR11A1Q9GZK7 315 aa2.97□□□□□ -1.93
SQLE-202ENST00000518604 YY1AP1Q9H869 796 aa2.97□□□□□ -1.93
SQLE-202ENST00000518604 LRRC40Q9H9A6 602 aa2.97□□□□□ -1.93
SQLE-202ENST00000518604 THUMPD1Q9NXG2 353 aaKnown RBP2.97□□□□□ -1.93
SQLE-202ENST00000518604 BFARQ9NZS9 450 aa2.97□□□□□ -1.93
SQLE-202ENST00000518604 MTRF1LQ9UGC7 380 aaKnown RBP2.97□□□□□ -1.93
SQLE-202ENST00000518604 NUFIP1Q9UHK0 495 aaKnown RBP2.97□□□□□ -1.93
SQLE-202ENST00000518604 TMCC3Q9ULS5 477 aa2.97□□□□□ -1.93
SQLE-202ENST00000518604 FRMPD3Q5JV73 1810 aa2.97□□□□□ -1.93
SQLE-202ENST00000518604 OBSCNQ5VST9 7968 aa2.97□□□□□ -1.93
SQLE-202ENST00000518604 CHD4Q14839 1912 aa2.96□□□□□ -1.94
SQLE-202ENST00000518604 ZNF208O43345 1280 aa2.96□□□□□ -1.94
SQLE-202ENST00000518604 MBTPS2O43462 519 aa2.96□□□□□ -1.94
SQLE-202ENST00000518604 FAM189A1O60320 539 aa2.96□□□□□ -1.94
SQLE-202ENST00000518604 INSP01308 110 aa2.96□□□□□ -1.94
SQLE-202ENST00000518604 ICAM2P13598 275 aa2.96□□□□□ -1.94
SQLE-202ENST00000518604 OPRD1P41143 372 aa2.96□□□□□ -1.94
SQLE-202ENST00000518604 IL24Q13007 206 aa2.96□□□□□ -1.94
SQLE-202ENST00000518604 DUSP7Q16829 419 aa2.96□□□□□ -1.94
SQLE-202ENST00000518604 ZNF658BQ4V348 819 aaPredicted RBP2.96□□□□□ -1.94
SQLE-202ENST00000518604 BCL7AQ4VC05 210 aa2.96□□□□□ -1.94
SQLE-202ENST00000518604 BOLA3Q53S33 107 aa2.96□□□□□ -1.94
SQLE-202ENST00000518604 PAGE3Q5JUK9 113 aa2.96□□□□□ -1.94
SQLE-202ENST00000518604 RFLNAQ6ZTI6 216 aa2.96□□□□□ -1.94
SQLE-202ENST00000518604 PGAP1Q75T13 922 aa2.96□□□□□ -1.94
SQLE-202ENST00000518604 TBC1D21Q8IYX1 336 aa2.96□□□□□ -1.94
SQLE-202ENST00000518604 FAM71E2Q8N5Q1 922 aa2.96□□□□□ -1.94
SQLE-202ENST00000518604 FAM83FQ8NEG4 500 aaPredicted RBP2.96□□□□□ -1.94
SQLE-202ENST00000518604 OR5D13Q8NGL4 314 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms