RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 CEBPGP53567 150 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 CDH4P55283 916 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 CDH6P55285 790 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 IGLV3-21P80748 117 aaPredicted RBP2.7□□□□□ -1.98
VPS13B-207ENST00000518569 KDSRQ06136 332 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 CD47Q08722 323 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 ITGB3BPQ13352 177 aaPredicted RBP2.7□□□□□ -1.98
VPS13B-207ENST00000518569 ASAH1Q13510 395 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 GPR176Q14439 515 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 RAB35Q15286 201 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 BCL2A1Q16548 175 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 CAMK4Q16566 473 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 MAPK6Q16659 721 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 SMUG1Q53HV7 270 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 THEM4Q5T1C6 240 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 FHL5Q5TD97 284 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 MLIPQ5VWP3 458 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 MEDAGQ5VYS4 303 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 DMKNQ6E0U4 476 aaPredicted RBP2.7□□□□□ -1.98
VPS13B-207ENST00000518569 TTC23LQ6PF05 361 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 NCCRP1Q6ZVX7 275 aaPredicted RBP2.7□□□□□ -1.98
VPS13B-207ENST00000518569 TRPM8Q7Z2W7 1104 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 C16orf62Q7Z3J2 963 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 AKAP14Q86UN6 197 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 CDR2LQ86X02 465 aaPredicted RBP2.7□□□□□ -1.98
VPS13B-207ENST00000518569 CCDC36Q8IYA8 594 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 CERS5Q8N5B7 392 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 MINDY2Q8NBR6 621 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 CCDC112Q8NEF3 446 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 ALS2CR12Q96Q35 445 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 DEFB126Q9BYW3 111 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 ELOVL4Q9GZR5 314 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 METTL8Q9H825 291 aaKnown RBP2.7□□□□□ -1.98
VPS13B-207ENST00000518569 ROPN1Q9HAT0 212 aaPredicted RBP2.7□□□□□ -1.98
VPS13B-207ENST00000518569 CYP3A43Q9HB55 503 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 SGK2Q9HBY8 427 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 ZNF275Q9NSD4 429 aaPredicted RBP2.7□□□□□ -1.98
VPS13B-207ENST00000518569 DUS2Q9NX74 493 aaKnown RBP2.7□□□□□ -1.98
VPS13B-207ENST00000518569 SLC2A8Q9NY64 477 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 B4GALT7Q9UBV7 327 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 CRLS1Q9UJA2 301 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 CFL2Q9Y281 166 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 MRPS33Q9Y291 106 aaKnown RBP2.7□□□□□ -1.98
VPS13B-207ENST00000518569 CA5BQ9Y2D0 317 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 EXOSC1Q9Y3B2 195 aaKnown RBP2.7□□□□□ -1.98
VPS13B-207ENST00000518569 SLCO1B1Q9Y6L6 691 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 CAMSAP1Q5T5Y3 1602 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 ABCA9Q8IUA7 1624 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 UHRF1BP1LA0JNW5 1464 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 CFAP74Q9C0B2 1584 aa2.7□□□□□ -1.98
VPS13B-207ENST00000518569 MYO3AQ8NEV4 1616 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 SMCO3A2RU48 225 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 TRPC5OSA6NMA1 111 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 C9JVG2 144 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 RAD51BO15315 384 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 TM9SF1O15321 606 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 RRP8O43159 456 aaKnown RBP2.69□□□□□ -1.98
VPS13B-207ENST00000518569 AKR7A2O43488 359 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 RNF13O43567 381 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 SNNO75324 88 aaPredicted RBP2.69□□□□□ -1.98
VPS13B-207ENST00000518569 ZNF189O75820 626 aaPredicted RBP2.69□□□□□ -1.98
VPS13B-207ENST00000518569 RPP14O95059 124 aaKnown RBP2.69□□□□□ -1.98
VPS13B-207ENST00000518569 SERPIND1P05546 499 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 GLAP06280 429 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 KRT7P08729 469 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 SLC35E2P0CK97 266 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 DNAH10OSP0CZ25 163 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 PNMTP11086 282 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 KLK2P20151 261 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 GNA11P29992 359 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 PCK1P35558 622 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 DLSTP36957 453 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 CBX5P45973 191 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 EMDP50402 254 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 CCNG1P51959 295 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 NAPAP54920 295 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 ERVPABLB-1P60509 514 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 RPS15P62841 145 aaKnown RBP2.69□□□□□ -1.98
VPS13B-207ENST00000518569 TNNC1P63316 161 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 S100A12P80511 92 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 FGL1Q08830 312 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 FUT7Q11130 342 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 STX5Q13190 355 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 KIAA0040Q15053 153 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 QRICH1Q2TAL8 776 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 RNF212Q495C1 297 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 HIKESHIQ53FT3 197 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 PAN3Q58A45 887 aaKnown RBP2.69□□□□□ -1.98
VPS13B-207ENST00000518569 LDLRAP1Q5SW96 308 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 BEND6Q5SZJ8 279 aaPredicted RBP2.69□□□□□ -1.98
VPS13B-207ENST00000518569 SLC22A10Q63ZE4 541 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 LRRC66Q68CR7 880 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 C1orf94Q6P1W5 598 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 HACD2Q6Y1H2 254 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 TMEM26Q6ZUK4 368 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 BHLHA15Q7RTS1 189 aaPredicted RBP2.69□□□□□ -1.98
VPS13B-207ENST00000518569 SSX9Q7RTT3 188 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 DCXRQ7Z4W1 244 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 SNX20Q7Z614 316 aa2.69□□□□□ -1.98
VPS13B-207ENST00000518569 ECHDC2Q86YB7 292 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms