RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 LSM1O15116 133 aaKnown RBP2.51□□□□□ -2.01
SKP1-204ENST00000517691 SMAD9O15198 467 aaKnown RBP2.51□□□□□ -2.01
SKP1-204ENST00000517691 LRRTM2O43300 516 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 GLCEO94923 617 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 SCELO95171 688 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 LRATO95237 230 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 F10P00742 488 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 ADAP00813 363 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 PRB1P04280 392 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 PABPC4LP0CB38 370 aaKnown RBP2.51□□□□□ -2.01
SKP1-204ENST00000517691 CALCBP10092 127 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 ITGAMP11215 1152 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 NT5EP21589 574 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 POU1F1P28069 291 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 ARRB2P32121 409 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 PTGER1P34995 402 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 PCGF2P35227 344 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 CAPGP40121 348 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 CDKN1BP46527 198 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 HAAOP46952 286 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 CLRN1P58418 232 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 RPL38P63173 70 aaKnown RBP2.51□□□□□ -2.01
SKP1-204ENST00000517691 RAE1P78406 368 aaKnown RBP2.51□□□□□ -2.01
SKP1-204ENST00000517691 ARG2P78540 354 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 ZNF763Q0D2J5 394 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 BIKQ13323 160 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 ALKBH1Q13686 389 aaKnown RBP2.51□□□□□ -2.01
SKP1-204ENST00000517691 ELAVL1Q15717 326 aaKnown RBP2.51□□□□□ -2.01
SKP1-204ENST00000517691 VMACQ2NL98 169 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 Q3ZCU0 254 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 SLC36A3Q495N2 470 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 RFTN2Q52LD8 501 aaPredicted RBP2.51□□□□□ -2.01
SKP1-204ENST00000517691 LACTB2Q53H82 288 aaPredicted RBP2.51□□□□□ -2.01
SKP1-204ENST00000517691 VWA5B1Q5TIE3 1220 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 ABHD17BQ5VST6 288 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 IL23RQ5VWK5 629 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 OR52E8Q6IFG1 317 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 ARSKQ6UWY0 536 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 TMEM108Q6UXF1 575 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 HSDL2Q6YN16 418 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 Q6ZSR9 355 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 CRLF3Q8IUI8 442 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 KIRREL3Q8IZU9 778 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 LIX1Q8N485 282 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 KIF2BQ8N4N8 673 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 ZADH2Q8N4Q0 377 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 SLC5A8Q8N695 610 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 PSD4Q8NDX1 1056 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 OR56B1Q8NGI3 324 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 CLHC1Q8NHS4 586 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 FAM76AQ8TAV0 307 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 RAB3IL1Q8TBN0 382 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 M1APQ8TC57 530 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 TM9SF4Q92544 642 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 RIT1Q92963 219 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 SNRNP40Q96DI7 357 aaKnown RBP2.51□□□□□ -2.01
SKP1-204ENST00000517691 ARSGQ96EG1 525 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 WBP1Q96G27 269 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 SENP5Q96HI0 755 aaPredicted RBP2.51□□□□□ -2.01
SKP1-204ENST00000517691 IMMP1LQ96LU5 166 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 PPP3R2Q96LZ3 170 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 C3orf30Q96M34 536 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 TSSK3Q96PN8 268 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 BBS4Q96RK4 519 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 SORT1Q99523 831 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 ZNF559Q9BR84 538 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 PIGQQ9BRB3 760 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 NUDT9Q9BW91 350 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 C1QTNF5Q9BXJ0 243 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 PINK1Q9BXM7 581 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 DEFB126Q9BYW3 111 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 NSRP1Q9H0G5 558 aaKnown RBP2.51□□□□□ -2.01
SKP1-204ENST00000517691 ADNPQ9H2P0 1102 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 MMP27Q9H306 513 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 CDCP1Q9H5V8 836 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 EXO5Q9H790 373 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 ANKRD10Q9NXR5 420 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 NLKQ9UBE8 527 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 COPS7AQ9UBW8 275 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 UBQLN2Q9UHD9 624 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 BCAP29Q9UHQ4 241 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 UTS2RQ9UKP6 389 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 NDRG4Q9ULP0 352 aaKnown RBP2.51□□□□□ -2.01
SKP1-204ENST00000517691 EIF3LQ9Y262 564 aaKnown RBP2.51□□□□□ -2.01
SKP1-204ENST00000517691 TP53TG5Q9Y2B4 290 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 HEMK1Q9Y5R4 338 aaPredicted RBP2.51□□□□□ -2.01
SKP1-204ENST00000517691 SDK2Q58EX2 2172 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 MGAQ8IWI9 3026 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 GOLGA8QA0A0J9YX86 632 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 C13orf42A0A1B0GVH6 325 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 A0A1W2PS29 197 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 SAGE2PA6NJ88 616 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 TRPC5OSA6NMA1 111 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 TCP11X1B4DZS4 312 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 NPIPB11E5RHQ5 1161 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 SLCO1B7G3V0H7 640 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 K7EM74 188 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 WWP2O00308 870 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 KLF11O14901 512 aa2.51□□□□□ -2.01
SKP1-204ENST00000517691 HDAC3O15379 428 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms