RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 LOC100653049A0A140TA62 436 aa11.31□□□□□ -0.6
CLCN3-210ENST00000515420 FTCDNL1E5RQL4 147 aa11.31□□□□□ -0.6
CLCN3-210ENST00000515420 SIAH2O43255 324 aa11.31□□□□□ -0.6
CLCN3-210ENST00000515420 RAMP1O60894 148 aa11.31□□□□□ -0.6
CLCN3-210ENST00000515420 KRT34O76011 436 aa11.31□□□□□ -0.6
CLCN3-210ENST00000515420 ADAP00813 363 aa11.31□□□□□ -0.6
CLCN3-210ENST00000515420 THBDP07204 575 aa11.31□□□□□ -0.6
CLCN3-210ENST00000515420 IL32P24001 234 aa11.31□□□□□ -0.6
CLCN3-210ENST00000515420 NR1H2P55055 460 aa11.31□□□□□ -0.6
CLCN3-210ENST00000515420 SF3A3Q12874 501 aaKnown RBP eCLIP11.31□□□□□ -0.6
CLCN3-210ENST00000515420 MFSD13AQ14CX5 517 aa11.31□□□□□ -0.6
CLCN3-210ENST00000515420 POU4F3Q15319 338 aa11.31□□□□□ -0.6
CLCN3-210ENST00000515420 TESK1Q15569 626 aa11.31□□□□□ -0.6
CLCN3-210ENST00000515420 DUSP7Q16829 419 aa11.31□□□□□ -0.6
CLCN3-210ENST00000515420 ALG10BQ5I7T1 473 aa11.31□□□□□ -0.6
CLCN3-210ENST00000515420 C1QTNF12Q5T7M4 302 aa11.31□□□□□ -0.6
CLCN3-210ENST00000515420 FAM69AQ5T7M9 428 aa11.31□□□□□ -0.6
CLCN3-210ENST00000515420 FBXW9Q5XUX1 488 aa11.31□□□□□ -0.6
CLCN3-210ENST00000515420 ZNF613Q6PF04 617 aa11.31□□□□□ -0.6
CLCN3-210ENST00000515420 PAMR1Q6UXH9 720 aa11.31□□□□□ -0.6
CLCN3-210ENST00000515420 C22orf34Q6ZV56 151 aa11.31□□□□□ -0.6
CLCN3-210ENST00000515420 P2RY8Q86VZ1 359 aa11.31□□□□□ -0.6
CLCN3-210ENST00000515420 SLC26A7Q8TE54 656 aa11.31□□□□□ -0.6
CLCN3-210ENST00000515420 HSD17B8Q92506 261 aa11.31□□□□□ -0.6
CLCN3-210ENST00000515420 PTDSS2Q9BVG9 487 aa11.31□□□□□ -0.6
CLCN3-210ENST00000515420 PCDHAC1Q9H158 963 aa11.31□□□□□ -0.6
CLCN3-210ENST00000515420 ARMCX1Q9P291 453 aa11.31□□□□□ -0.6
CLCN3-210ENST00000515420 RASD1Q9Y272 281 aa11.31□□□□□ -0.6
CLCN3-210ENST00000515420 A0A087WUJ7 227 aa11.3□□□□□ -0.6
CLCN3-210ENST00000515420 FAM220BPB1ANY3 271 aa11.3□□□□□ -0.6
CLCN3-210ENST00000515420 KLF4O43474 513 aa11.3□□□□□ -0.6
CLCN3-210ENST00000515420 AKR7A3O95154 331 aa11.3□□□□□ -0.6
CLCN3-210ENST00000515420 IFNA14P01570 189 aa11.3□□□□□ -0.6
CLCN3-210ENST00000515420 OPN1SWP03999 348 aa11.3□□□□□ -0.6
CLCN3-210ENST00000515420 COX4I1P13073 169 aa11.3□□□□□ -0.6
CLCN3-210ENST00000515420 CD247P20963 164 aa11.3□□□□□ -0.6
CLCN3-210ENST00000515420 DNASE1P24855 282 aa11.3□□□□□ -0.6
CLCN3-210ENST00000515420 LSP1P33241 339 aa11.3□□□□□ -0.6
CLCN3-210ENST00000515420 P2RY4P51582 365 aa11.3□□□□□ -0.6
CLCN3-210ENST00000515420 OR1Q1Q15612 314 aa11.3□□□□□ -0.6
CLCN3-210ENST00000515420 ANKRD34AQ69YU3 496 aa11.3□□□□□ -0.6
CLCN3-210ENST00000515420 HACD2Q6Y1H2 254 aa11.3□□□□□ -0.6
CLCN3-210ENST00000515420 SPNS3Q6ZMD2 512 aa11.3□□□□□ -0.6
CLCN3-210ENST00000515420 BHLHA15Q7RTS1 189 aaPredicted RBP11.3□□□□□ -0.6
CLCN3-210ENST00000515420 TMEM99Q8N816 258 aa11.3□□□□□ -0.6
CLCN3-210ENST00000515420 SMYD1Q8NB12 490 aa11.3□□□□□ -0.6
CLCN3-210ENST00000515420 ADPRHL1Q8NDY3 354 aa11.3□□□□□ -0.6
CLCN3-210ENST00000515420 GPR32P1Q8NGA4 272 aa11.3□□□□□ -0.6
CLCN3-210ENST00000515420 OR9K2Q8NGE7 335 aa11.3□□□□□ -0.6
CLCN3-210ENST00000515420 S100PBPQ96BU1 408 aa11.3□□□□□ -0.6
CLCN3-210ENST00000515420 ZNF775Q96BV0 537 aaPredicted RBP11.3□□□□□ -0.6
CLCN3-210ENST00000515420 TAMM41Q96BW9 452 aa11.3□□□□□ -0.6
CLCN3-210ENST00000515420 RCN3Q96D15 328 aa11.3□□□□□ -0.6
CLCN3-210ENST00000515420 MBD6Q96DN6 1003 aa11.3□□□□□ -0.6
CLCN3-210ENST00000515420 DNAJA3Q96EY1 480 aa11.3□□□□□ -0.6
CLCN3-210ENST00000515420 ZC3HAV1LQ96H79 300 aaKnown RBP11.3□□□□□ -0.6
CLCN3-210ENST00000515420 ZNF583Q96ND8 569 aa11.3□□□□□ -0.6
CLCN3-210ENST00000515420 EPYCQ99645 322 aa11.3□□□□□ -0.6
CLCN3-210ENST00000515420 TMEM43Q9BTV4 400 aa11.3□□□□□ -0.6
CLCN3-210ENST00000515420 NGBQ9NPG2 151 aa11.3□□□□□ -0.6
CLCN3-210ENST00000515420 ADPRHL2Q9NX46 363 aa11.3□□□□□ -0.6
CLCN3-210ENST00000515420 C6orf203Q9P0P8 240 aaPredicted RBP11.3□□□□□ -0.6
CLCN3-210ENST00000515420 PRSS50Q9UI38 385 aa11.3□□□□□ -0.6
CLCN3-210ENST00000515420 RAI1Q7Z5J4 1906 aaPredicted RBP11.3□□□□□ -0.6
CLCN3-210ENST00000515420 PRR14LQ5THK1 2151 aa11.3□□□□□ -0.6
CLCN3-210ENST00000515420 AKAP9Q99996 3911 aa11.29□□□□□ -0.6
CLCN3-210ENST00000515420 IGKV1D-42A0A075B6H8 117 aa11.29□□□□□ -0.6
CLCN3-210ENST00000515420 TRAV36DV7A0A075B6V5 113 aa11.29□□□□□ -0.6
CLCN3-210ENST00000515420 A0A1W2PPR1 153 aa11.29□□□□□ -0.6
CLCN3-210ENST00000515420 OR6C65A6NJZ3 312 aa11.29□□□□□ -0.6
CLCN3-210ENST00000515420 NDUFAB1O14561 156 aa11.29□□□□□ -0.6
CLCN3-210ENST00000515420 DYNC1I1O14576 645 aa11.29□□□□□ -0.6
CLCN3-210ENST00000515420 CHP2O43745 196 aa11.29□□□□□ -0.6
CLCN3-210ENST00000515420 SNX3O60493 162 aa11.29□□□□□ -0.6
CLCN3-210ENST00000515420 TPST2O60704 377 aa11.29□□□□□ -0.6
CLCN3-210ENST00000515420 RAF1P04049 648 aa11.29□□□□□ -0.6
CLCN3-210ENST00000515420 IGHV1-2P23083 117 aa11.29□□□□□ -0.6
CLCN3-210ENST00000515420 EDNRAP25101 427 aa11.29□□□□□ -0.6
CLCN3-210ENST00000515420 LOXP28300 417 aaPredicted RBP11.29□□□□□ -0.6
CLCN3-210ENST00000515420 GTF2E2P29084 291 aaKnown RBP11.29□□□□□ -0.6
CLCN3-210ENST00000515420 PRDX6P30041 224 aa11.29□□□□□ -0.6
CLCN3-210ENST00000515420 RPS5P46782 204 aaKnown RBP11.29□□□□□ -0.6
CLCN3-210ENST00000515420 CRYBA2P53672 197 aa11.29□□□□□ -0.6
CLCN3-210ENST00000515420 IST1P53990 364 aa11.29□□□□□ -0.6
CLCN3-210ENST00000515420 SEC24CP53992 1094 aa11.29□□□□□ -0.6
CLCN3-210ENST00000515420 TIMM23BQ5SRD1 257 aa11.29□□□□□ -0.6
CLCN3-210ENST00000515420 TMEM225Q6GV28 225 aa11.29□□□□□ -0.6
CLCN3-210ENST00000515420 CASP12Q6UXS9 341 aa11.29□□□□□ -0.6
CLCN3-210ENST00000515420 LURAP1LQ8IV03 231 aa11.29□□□□□ -0.6
CLCN3-210ENST00000515420 POU5F2Q8N7G0 328 aa11.29□□□□□ -0.6
CLCN3-210ENST00000515420 ZNF433Q8N7K0 673 aaPredicted RBP11.29□□□□□ -0.6
CLCN3-210ENST00000515420 OR2T12Q8NG77 320 aa11.29□□□□□ -0.6
CLCN3-210ENST00000515420 NRGNQ92686 78 aa11.29□□□□□ -0.6
CLCN3-210ENST00000515420 PROX1Q92786 737 aa11.29□□□□□ -0.6
CLCN3-210ENST00000515420 CMTM5Q96DZ9 223 aa11.29□□□□□ -0.6
CLCN3-210ENST00000515420 KTI12Q96EK9 354 aaPredicted RBP11.29□□□□□ -0.6
CLCN3-210ENST00000515420 PIK3IP1Q96FE7 263 aa11.29□□□□□ -0.6
CLCN3-210ENST00000515420 ALPK1Q96QP1 1244 aa11.29□□□□□ -0.6
CLCN3-210ENST00000515420 MCHR1Q99705 422 aa11.29□□□□□ -0.6
CLCN3-210ENST00000515420 FOXC2Q99958 501 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms