RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 PPP3CBP16298 524 aa10.14□□□□□ -0.79
VCAN-212ENST00000515397 CDH2P19022 906 aaPredicted RBP10.14□□□□□ -0.79
VCAN-212ENST00000515397 GZMMP51124 257 aa10.14□□□□□ -0.79
VCAN-212ENST00000515397 P2RY4P51582 365 aa10.14□□□□□ -0.79
VCAN-212ENST00000515397 GYS2P54840 703 aa10.14□□□□□ -0.79
VCAN-212ENST00000515397 RGS8P57771 180 aaPredicted RBP10.14□□□□□ -0.79
VCAN-212ENST00000515397 IRX1P78414 480 aaPredicted RBP10.14□□□□□ -0.79
VCAN-212ENST00000515397 P2RY6Q15077 328 aa10.14□□□□□ -0.79
VCAN-212ENST00000515397 PDK3Q15120 406 aa10.14□□□□□ -0.79
VCAN-212ENST00000515397 ACKR1Q16570 336 aa10.14□□□□□ -0.79
VCAN-212ENST00000515397 ZSWIM7Q19AV6 140 aa10.14□□□□□ -0.79
VCAN-212ENST00000515397 BEX5Q5H9J7 111 aa10.14□□□□□ -0.79
VCAN-212ENST00000515397 TSPO2Q5TGU0 170 aa10.14□□□□□ -0.79
VCAN-212ENST00000515397 FBXW9Q5XUX1 488 aa10.14□□□□□ -0.79
VCAN-212ENST00000515397 REP15Q6BDI9 236 aa10.14□□□□□ -0.79
VCAN-212ENST00000515397 TMEM225Q6GV28 225 aa10.14□□□□□ -0.79
VCAN-212ENST00000515397 PAQR6Q6TCH4 344 aa10.14□□□□□ -0.79
VCAN-212ENST00000515397 SPNS3Q6ZMD2 512 aa10.14□□□□□ -0.79
VCAN-212ENST00000515397 ZNF433Q8N7K0 673 aaPredicted RBP10.14□□□□□ -0.79
VCAN-212ENST00000515397 OR9K2Q8NGE7 335 aa10.14□□□□□ -0.79
VCAN-212ENST00000515397 OR4D11Q8NGI4 311 aa10.14□□□□□ -0.79
VCAN-212ENST00000515397 OR52N5Q8NH56 324 aa10.14□□□□□ -0.79
VCAN-212ENST00000515397 VANGL1Q8TAA9 524 aaPredicted RBP10.14□□□□□ -0.79
VCAN-212ENST00000515397 TSPEARQ8WU66 669 aa10.14□□□□□ -0.79
VCAN-212ENST00000515397 NINJ1Q92982 152 aa10.14□□□□□ -0.79
VCAN-212ENST00000515397 LRRC58Q96CX6 371 aa10.14□□□□□ -0.79
VCAN-212ENST00000515397 FOXC2Q99958 501 aa10.14□□□□□ -0.79
VCAN-212ENST00000515397 TACO1Q9BSH4 297 aaKnown RBP10.14□□□□□ -0.79
VCAN-212ENST00000515397 PTDSS2Q9BVG9 487 aa10.14□□□□□ -0.79
VCAN-212ENST00000515397 SPATA5L1Q9BVQ7 753 aa10.14□□□□□ -0.79
VCAN-212ENST00000515397 TAPBPLQ9BX59 468 aa10.14□□□□□ -0.79
VCAN-212ENST00000515397 HDHD5Q9BXW7 423 aa10.14□□□□□ -0.79
VCAN-212ENST00000515397 SLC7A10Q9NS82 523 aa10.14□□□□□ -0.79
VCAN-212ENST00000515397 SLC13A4Q9UKG4 626 aa10.14□□□□□ -0.79
VCAN-212ENST00000515397 CORO2BQ9UQ03 480 aa10.14□□□□□ -0.79
VCAN-212ENST00000515397 ANGPT4Q9Y264 503 aa10.14□□□□□ -0.79
VCAN-212ENST00000515397 GMEB1Q9Y692 573 aa10.14□□□□□ -0.79
VCAN-212ENST00000515397 IGKV1D-42A0A075B6H8 117 aa10.13□□□□□ -0.79
VCAN-212ENST00000515397 DPRXA6NFQ7 191 aa10.13□□□□□ -0.79
VCAN-212ENST00000515397 AQP7P3A6NL99 342 aa10.13□□□□□ -0.79
VCAN-212ENST00000515397 FXYD1O00168 92 aa10.13□□□□□ -0.79
VCAN-212ENST00000515397 GPR171O14626 319 aa10.13□□□□□ -0.79
VCAN-212ENST00000515397 DNPH1O43598 174 aa10.13□□□□□ -0.79
VCAN-212ENST00000515397 SHOX2O60902 331 aaPredicted RBP10.13□□□□□ -0.79
VCAN-212ENST00000515397 SERPINB7O75635 380 aa10.13□□□□□ -0.79
VCAN-212ENST00000515397 GGT1P19440 569 aa10.13□□□□□ -0.79
VCAN-212ENST00000515397 TNFRSF1BP20333 461 aa10.13□□□□□ -0.79
VCAN-212ENST00000515397 SLC16A1P53985 500 aa10.13□□□□□ -0.79
VCAN-212ENST00000515397 SEC24CP53992 1094 aa10.13□□□□□ -0.79
VCAN-212ENST00000515397 CDH12P55289 794 aa10.13□□□□□ -0.79
VCAN-212ENST00000515397 PCBP3P57721 371 aaKnown RBP10.13□□□□□ -0.79
VCAN-212ENST00000515397 CYLC2Q14093 348 aaPredicted RBP10.13□□□□□ -0.79
VCAN-212ENST00000515397 NPTX1Q15818 432 aa10.13□□□□□ -0.79
VCAN-212ENST00000515397 TRMT5Q32P41 509 aaKnown RBP10.13□□□□□ -0.79
VCAN-212ENST00000515397 ALG10BQ5I7T1 473 aa10.13□□□□□ -0.79
VCAN-212ENST00000515397 ZNF704Q6ZNC4 412 aaPredicted RBP10.13□□□□□ -0.79
VCAN-212ENST00000515397 AAED1Q7RTV5 226 aa10.13□□□□□ -0.79
VCAN-212ENST00000515397 TSPYL5Q86VY4 417 aaPredicted RBP10.13□□□□□ -0.79
VCAN-212ENST00000515397 WFDC11Q8NEX6 87 aa10.13□□□□□ -0.79
VCAN-212ENST00000515397 OR6T1Q8NGN1 323 aa10.13□□□□□ -0.79
VCAN-212ENST00000515397 LILRB1Q8NHL6 650 aaPredicted RBP10.13□□□□□ -0.79
VCAN-212ENST00000515397 STK35Q8TDR2 534 aa10.13□□□□□ -0.79
VCAN-212ENST00000515397 C10orf82Q8WW14 230 aa10.13□□□□□ -0.79
VCAN-212ENST00000515397 HSD17B8Q92506 261 aa10.13□□□□□ -0.79
VCAN-212ENST00000515397 AKAP1Q92667 903 aaKnown RBP eCLIP10.13□□□□□ -0.79
VCAN-212ENST00000515397 TAMM41Q96BW9 452 aa10.13□□□□□ -0.79
VCAN-212ENST00000515397 ZNF317Q96PQ6 595 aaPredicted RBP10.13□□□□□ -0.79
VCAN-212ENST00000515397 MCHR1Q99705 422 aa10.13□□□□□ -0.79
VCAN-212ENST00000515397 TRIM2Q9C040 744 aa10.13□□□□□ -0.79
VCAN-212ENST00000515397 FAM107BQ9H098 131 aa10.13□□□□□ -0.79
VCAN-212ENST00000515397 CCDC134Q9H6E4 229 aa10.13□□□□□ -0.79
VCAN-212ENST00000515397 TMEM27Q9HBJ8 222 aa10.13□□□□□ -0.79
VCAN-212ENST00000515397 MED4Q9NPJ6 270 aa10.13□□□□□ -0.79
VCAN-212ENST00000515397 ASB6Q9NWX5 421 aa10.13□□□□□ -0.79
VCAN-212ENST00000515397 NPAP1Q9NZP6 1156 aa10.13□□□□□ -0.79
VCAN-212ENST00000515397 UPB1Q9UBR1 384 aa10.13□□□□□ -0.79
VCAN-212ENST00000515397 FLNAP21333 2647 aaKnown RBP10.12□□□□□ -0.79
VCAN-212ENST00000515397 PRORSD1PA6NEY8 169 aa10.12□□□□□ -0.79
VCAN-212ENST00000515397 CPSF4LA6NMK7 179 aaKnown RBP10.12□□□□□ -0.79
VCAN-212ENST00000515397 GOSR1O95249 250 aa10.12□□□□□ -0.79
VCAN-212ENST00000515397 AHSA1O95433 338 aa10.12□□□□□ -0.79
VCAN-212ENST00000515397 LGI1O95970 557 aa10.12□□□□□ -0.79
VCAN-212ENST00000515397 THY1P04216 161 aa10.12□□□□□ -0.79
VCAN-212ENST00000515397 ITGA5P08648 1049 aa10.12□□□□□ -0.79
VCAN-212ENST00000515397 PNMTP11086 282 aa10.12□□□□□ -0.79
VCAN-212ENST00000515397 SELENOPP49908 381 aa10.12□□□□□ -0.79
VCAN-212ENST00000515397 ZNF83P51522 516 aa10.12□□□□□ -0.79
VCAN-212ENST00000515397 MAP2K6P52564 334 aa10.12□□□□□ -0.79
VCAN-212ENST00000515397 CRYBA2P53672 197 aa10.12□□□□□ -0.79
VCAN-212ENST00000515397 ADAM8P78325 824 aa10.12□□□□□ -0.79
VCAN-212ENST00000515397 IL1RL1Q01638 556 aa10.12□□□□□ -0.79
VCAN-212ENST00000515397 LTBQ06643 244 aa10.12□□□□□ -0.79
VCAN-212ENST00000515397 BSPH1Q075Z2 132 aa10.12□□□□□ -0.79
VCAN-212ENST00000515397 RBBP4Q09028 425 aa10.12□□□□□ -0.79
VCAN-212ENST00000515397 PPA1Q15181 289 aa10.12□□□□□ -0.79
VCAN-212ENST00000515397 VMACQ2NL98 169 aa10.12□□□□□ -0.79
VCAN-212ENST00000515397 SEZ6L2Q6UXD5 910 aa10.12□□□□□ -0.79
VCAN-212ENST00000515397 NET1Q7Z628 596 aaPredicted RBP10.12□□□□□ -0.79
VCAN-212ENST00000515397 EPHX4Q8IUS5 362 aa10.12□□□□□ -0.79
VCAN-212ENST00000515397 RCN3Q96D15 328 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms