RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 OR9K2Q8NGE7 335 aa13.1□□□□□ -0.31
DDR1-278ENST00000515233 WDR60Q8WVS4 1066 aa13.1□□□□□ -0.31
DDR1-278ENST00000515233 MSI2Q96DH6 328 aaKnown RBP13.1□□□□□ -0.31
DDR1-278ENST00000515233 AURKBQ96GD4 344 aaPredicted RBP13.1□□□□□ -0.31
DDR1-278ENST00000515233 FOXN4Q96NZ1 517 aa13.1□□□□□ -0.31
DDR1-278ENST00000515233 C20orf27Q9GZN8 174 aa13.1□□□□□ -0.31
DDR1-278ENST00000515233 OR6C65A6NJZ3 312 aa13.09□□□□□ -0.31
DDR1-278ENST00000515233 B9A039 149 aa13.09□□□□□ -0.31
DDR1-278ENST00000515233 E9PBE3 544 aa13.09□□□□□ -0.31
DDR1-278ENST00000515233 BIRC5O15392 142 aa13.09□□□□□ -0.31
DDR1-278ENST00000515233 PDE5AO76074 875 aa13.09□□□□□ -0.31
DDR1-278ENST00000515233 VAMP5O95183 116 aa13.09□□□□□ -0.31
DDR1-278ENST00000515233 CRYAAP02489 173 aa13.09□□□□□ -0.31
DDR1-278ENST00000515233 DBIP07108 87 aaKnown RBP13.09□□□□□ -0.31
DDR1-278ENST00000515233 CDH2P19022 906 aaPredicted RBP13.09□□□□□ -0.31
DDR1-278ENST00000515233 CXCR1P25024 350 aa13.09□□□□□ -0.31
DDR1-278ENST00000515233 S100A3P33764 101 aa13.09□□□□□ -0.31
DDR1-278ENST00000515233 SERPINF1P36955 418 aa13.09□□□□□ -0.31
DDR1-278ENST00000515233 P2RY4P51582 365 aa13.09□□□□□ -0.31
DDR1-278ENST00000515233 SNRPD2P62316 118 aaKnown RBP13.09□□□□□ -0.31
DDR1-278ENST00000515233 FAM174BQ3ZCQ3 159 aa13.09□□□□□ -0.31
DDR1-278ENST00000515233 HIKESHIQ53FT3 197 aa13.09□□□□□ -0.31
DDR1-278ENST00000515233 FAM120AOSQ5T036 256 aa13.09□□□□□ -0.31
DDR1-278ENST00000515233 MRPL2Q5T653 305 aaKnown RBP13.09□□□□□ -0.31
DDR1-278ENST00000515233 TMEM225Q6GV28 225 aa13.09□□□□□ -0.31
DDR1-278ENST00000515233 ZNF440Q8IYI8 595 aa13.09□□□□□ -0.31
DDR1-278ENST00000515233 KIRREL3Q8IZU9 778 aa13.09□□□□□ -0.31
DDR1-278ENST00000515233 ZNF540Q8NDQ6 660 aa13.09□□□□□ -0.31
DDR1-278ENST00000515233 MAGEE2Q8TD90 523 aaPredicted RBP13.09□□□□□ -0.31
DDR1-278ENST00000515233 ZNF317Q96PQ6 595 aaPredicted RBP13.09□□□□□ -0.31
DDR1-278ENST00000515233 SLC38A2Q96QD8 506 aa13.09□□□□□ -0.31
DDR1-278ENST00000515233 PANX1Q96RD7 426 aa13.09□□□□□ -0.31
DDR1-278ENST00000515233 KATNB1Q9BVA0 655 aa13.09□□□□□ -0.31
DDR1-278ENST00000515233 C19orf24Q9BVV8 132 aa13.09□□□□□ -0.31
DDR1-278ENST00000515233 CA10Q9NS85 328 aa13.09□□□□□ -0.31
DDR1-278ENST00000515233 HAO1Q9UJM8 370 aa13.09□□□□□ -0.31
DDR1-278ENST00000515233 CDHR4A6H8M9 788 aa13.08□□□□□ -0.32
DDR1-278ENST00000515233 CCDC154A6NI56 674 aa13.08□□□□□ -0.32
DDR1-278ENST00000515233 APEHP13798 732 aaKnown RBP13.08□□□□□ -0.32
DDR1-278ENST00000515233 HOXB1P14653 301 aaPredicted RBP13.08□□□□□ -0.32
DDR1-278ENST00000515233 ACAA2P42765 397 aaKnown RBP13.08□□□□□ -0.32
DDR1-278ENST00000515233 LRRC74AQ0VAA2 488 aa13.08□□□□□ -0.32
DDR1-278ENST00000515233 OR7A5Q15622 319 aa13.08□□□□□ -0.32
DDR1-278ENST00000515233 EFNB3Q15768 340 aa13.08□□□□□ -0.32
DDR1-278ENST00000515233 CHI3L2Q15782 390 aa13.08□□□□□ -0.32
DDR1-278ENST00000515233 TBRG1Q3YBR2 411 aa13.08□□□□□ -0.32
DDR1-278ENST00000515233 OGFOD2Q6N063 350 aa13.08□□□□□ -0.32
DDR1-278ENST00000515233 ANKRD16Q6P6B7 361 aa13.08□□□□□ -0.32
DDR1-278ENST00000515233 CREB3L2Q70SY1 520 aa13.08□□□□□ -0.32
DDR1-278ENST00000515233 FAM169BQ8N8A8 192 aa13.08□□□□□ -0.32
DDR1-278ENST00000515233 OR1K1Q8NGR3 316 aa13.08□□□□□ -0.32
DDR1-278ENST00000515233 BCL2L2Q92843 193 aaPredicted RBP13.08□□□□□ -0.32
DDR1-278ENST00000515233 PKNOX2Q96KN3 472 aa13.08□□□□□ -0.32
DDR1-278ENST00000515233 TEX37Q96LM6 180 aa13.08□□□□□ -0.32
DDR1-278ENST00000515233 SORT1Q99523 831 aa13.08□□□□□ -0.32
DDR1-278ENST00000515233 VRK1Q99986 396 aaPredicted RBP13.08□□□□□ -0.32
DDR1-278ENST00000515233 KCNS3Q9BQ31 491 aa13.08□□□□□ -0.32
DDR1-278ENST00000515233 TMEM109Q9BVC6 243 aa13.08□□□□□ -0.32
DDR1-278ENST00000515233 TAPBPLQ9BX59 468 aa13.08□□□□□ -0.32
DDR1-278ENST00000515233 MOV10Q9HCE1 1003 aaKnown RBP13.08□□□□□ -0.32
DDR1-278ENST00000515233 CRNNQ9UBG3 495 aaPredicted RBP13.08□□□□□ -0.32
DDR1-278ENST00000515233 FBXO9Q9UK97 447 aaPredicted RBP13.08□□□□□ -0.32
DDR1-278ENST00000515233 ARPC4-TTLL3A0A0A6YYG9 625 aa13.07□□□□□ -0.32
DDR1-278ENST00000515233 IGHV4-61A0A0C4DH41 118 aa13.07□□□□□ -0.32
DDR1-278ENST00000515233 WDR91A4D1P6 747 aa13.07□□□□□ -0.32
DDR1-278ENST00000515233 A8MVM7 634 aa13.07□□□□□ -0.32
DDR1-278ENST00000515233 KRT33AO76009 404 aa13.07□□□□□ -0.32
DDR1-278ENST00000515233 NR2F1P10589 423 aa13.07□□□□□ -0.32
DDR1-278ENST00000515233 ZNF23P17027 643 aa13.07□□□□□ -0.32
DDR1-278ENST00000515233 HNF1AP20823 631 aa13.07□□□□□ -0.32
DDR1-278ENST00000515233 SLC1A6P48664 564 aa13.07□□□□□ -0.32
DDR1-278ENST00000515233 PPOXP50336 477 aa13.07□□□□□ -0.32
DDR1-278ENST00000515233 SQLEQ14534 574 aa13.07□□□□□ -0.32
DDR1-278ENST00000515233 ADIPOQQ15848 244 aa13.07□□□□□ -0.32
DDR1-278ENST00000515233 WBP2NLQ6ICG8 309 aa13.07□□□□□ -0.32
DDR1-278ENST00000515233 ZNF621Q6ZSS3 439 aa13.07□□□□□ -0.32
DDR1-278ENST00000515233 SLC46A3Q7Z3Q1 461 aa13.07□□□□□ -0.32
DDR1-278ENST00000515233 GPAT4Q86UL3 456 aa13.07□□□□□ -0.32
DDR1-278ENST00000515233 LSRQ86X29 649 aaPredicted RBP13.07□□□□□ -0.32
DDR1-278ENST00000515233 PEX5LQ8IYB4 626 aa13.07□□□□□ -0.32
DDR1-278ENST00000515233 NUF2Q9BZD4 464 aa13.07□□□□□ -0.32
DDR1-278ENST00000515233 LINC00470Q9BZP3 86 aa13.07□□□□□ -0.32
DDR1-278ENST00000515233 PLK3Q9H4B4 646 aa13.07□□□□□ -0.32
DDR1-278ENST00000515233 CHODLQ9H9P2 273 aa13.07□□□□□ -0.32
DDR1-278ENST00000515233 MEAF6Q9HAF1 191 aa13.07□□□□□ -0.32
DDR1-278ENST00000515233 RLIMQ9NVW2 624 aa13.07□□□□□ -0.32
DDR1-278ENST00000515233 ZNF587BE7ETH6 402 aa13.06□□□□□ -0.32
DDR1-278ENST00000515233 NPIPB7O75200 414 aa13.06□□□□□ -0.32
DDR1-278ENST00000515233 LGI1O95970 557 aa13.06□□□□□ -0.32
DDR1-278ENST00000515233 TGFAP01135 160 aa13.06□□□□□ -0.32
DDR1-278ENST00000515233 IGLV1-44P01699 117 aa13.06□□□□□ -0.32
DDR1-278ENST00000515233 PGRP06401 933 aa13.06□□□□□ -0.32
DDR1-278ENST00000515233 C8BP07358 591 aa13.06□□□□□ -0.32
DDR1-278ENST00000515233 TFPTP0C1Z6 253 aa13.06□□□□□ -0.32
DDR1-278ENST00000515233 OR4A8P0C604 315 aa13.06□□□□□ -0.32
DDR1-278ENST00000515233 IL12AP29459 219 aa13.06□□□□□ -0.32
DDR1-278ENST00000515233 CDKN2CP42773 168 aa13.06□□□□□ -0.32
DDR1-278ENST00000515233 SELENOPP49908 381 aa13.06□□□□□ -0.32
DDR1-278ENST00000515233 IDH3GP51553 393 aaPredicted RBP13.06□□□□□ -0.32
DDR1-278ENST00000515233 UBE2NP61088 152 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms