RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 TRAV36DV7A0A075B6V5 113 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 TRAV27A0A087WT01 109 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 IGHV1-45A0A0A0MS14 117 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 TRBV11-1A0A0K0K1C0 115 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 CDC14CA4D256 554 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 TRABD2BA6NFA1 517 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 ANKUB1A6NFN9 424 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 PRR23D1E9PI22 279 aaPredicted RBP9.28□□□□□ -0.92
SNF8-214ENST00000515174 PLD2O14939 933 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 MYL12BO14950 172 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 CSO75390 466 aaKnown RBP9.28□□□□□ -0.92
SNF8-214ENST00000515174 CLPXO76031 633 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 DLGAP3O95886 979 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 CH25HO95992 272 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 CD14P08571 375 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 INHBBP09529 407 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 LIMS3P0CW19 117 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 LIMS4P0CW20 117 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 PRR23D2P0DMB1 279 aaPredicted RBP9.28□□□□□ -0.92
SNF8-214ENST00000515174 ICAM2P13598 275 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 CPEP16870 476 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 GALP22466 123 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 CXCR1P25024 350 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 FKBP2P26885 142 aaKnown RBP9.28□□□□□ -0.92
SNF8-214ENST00000515174 TACR3P29371 465 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 UQCRC1P31930 480 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 PEX19P40855 299 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 RNF144AP50876 292 aaPredicted RBP9.28□□□□□ -0.92
SNF8-214ENST00000515174 POLR2HP52434 150 aaKnown RBP9.28□□□□□ -0.92
SNF8-214ENST00000515174 SPCS2Q15005 226 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 MED22Q15528 200 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 DGUOKQ16854 277 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 SLC35D3Q5M8T2 416 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 HES3Q5TGS1 186 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 GPR139Q6DWJ6 353 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 NIPAL3Q6P499 406 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 USP43Q70EL4 1123 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 GLRX5Q86SX6 157 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 ACBD7Q8N6N7 88 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 SLC37A3Q8NCC5 494 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 ZNF563Q8TA94 476 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 DYNC2LI1Q8TCX1 351 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 DUSP19Q8WTR2 217 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 OPALINQ96PE5 141 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 SNX18Q96RF0 628 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 TEAD3Q99594 435 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 COQ7Q99807 217 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 ARHGAP9Q9BRR9 750 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 DEFB126Q9BYW3 111 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 ULBP3Q9BZM4 244 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 NMNAT2Q9BZQ4 307 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 ZBTB20Q9HC78 741 aaPredicted RBP9.28□□□□□ -0.92
SNF8-214ENST00000515174 NANSQ9NR45 359 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 CLEC2DQ9UHP7 191 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 GPR52Q9Y2T5 361 aa9.28□□□□□ -0.92
SNF8-214ENST00000515174 CAB39Q9Y376 341 aaPredicted RBP9.28□□□□□ -0.92
SNF8-214ENST00000515174 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.27□□□□□ -0.93
SNF8-214ENST00000515174 CCDC182A6NF36 153 aa9.27□□□□□ -0.93
SNF8-214ENST00000515174 A8MVM7 634 aa9.27□□□□□ -0.93
SNF8-214ENST00000515174 KPNA4O00629 521 aaPredicted RBP9.27□□□□□ -0.93
SNF8-214ENST00000515174 OR2T1O43869 369 aa9.27□□□□□ -0.93
SNF8-214ENST00000515174 ZNF354AO60765 605 aaPredicted RBP9.27□□□□□ -0.93
SNF8-214ENST00000515174 SLC2A10O95528 541 aa9.27□□□□□ -0.93
SNF8-214ENST00000515174 BGLAPP02818 100 aa9.27□□□□□ -0.93
SNF8-214ENST00000515174 COX6A1P12074 109 aa9.27□□□□□ -0.93
SNF8-214ENST00000515174 CD53P19397 219 aa9.27□□□□□ -0.93
SNF8-214ENST00000515174 PSMA1P25786 263 aaKnown RBP9.27□□□□□ -0.93
SNF8-214ENST00000515174 ETV5P41161 510 aa9.27□□□□□ -0.93
SNF8-214ENST00000515174 APOBEC1P41238 236 aaKnown RBP9.27□□□□□ -0.93
SNF8-214ENST00000515174 SERPINB10P48595 397 aa9.27□□□□□ -0.93
SNF8-214ENST00000515174 CLK1P49759 484 aaKnown RBP9.27□□□□□ -0.93
SNF8-214ENST00000515174 ETV1P50549 477 aa9.27□□□□□ -0.93
SNF8-214ENST00000515174 SLC25A1P53007 311 aa9.27□□□□□ -0.93
SNF8-214ENST00000515174 LGALS3BPQ08380 585 aa9.27□□□□□ -0.93
SNF8-214ENST00000515174 GGTLC2Q14390 218 aa9.27□□□□□ -0.93
SNF8-214ENST00000515174 SSPNQ14714 243 aa9.27□□□□□ -0.93
SNF8-214ENST00000515174 MFSD13AQ14CX5 517 aa9.27□□□□□ -0.93
SNF8-214ENST00000515174 QPRTQ15274 297 aa9.27□□□□□ -0.93
SNF8-214ENST00000515174 SSX1Q16384 188 aa9.27□□□□□ -0.93
SNF8-214ENST00000515174 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.27□□□□□ -0.93
SNF8-214ENST00000515174 ZNF791Q3KP31 576 aaPredicted RBP9.27□□□□□ -0.93
SNF8-214ENST00000515174 DESI1Q6ICB0 168 aa9.27□□□□□ -0.93
SNF8-214ENST00000515174 PLBD1Q6P4A8 553 aa9.27□□□□□ -0.93
SNF8-214ENST00000515174 LRRC69Q6ZNQ3 347 aa9.27□□□□□ -0.93
SNF8-214ENST00000515174 NDUFAF7Q7L592 441 aa9.27□□□□□ -0.93
SNF8-214ENST00000515174 RAB11FIP2Q7L804 512 aa9.27□□□□□ -0.93
SNF8-214ENST00000515174 TMPRSS7Q7RTY8 843 aa9.27□□□□□ -0.93
SNF8-214ENST00000515174 ADGRG3Q86Y34 549 aa9.27□□□□□ -0.93
SNF8-214ENST00000515174 CROCCP3Q8IVE0 287 aa9.27□□□□□ -0.93
SNF8-214ENST00000515174 TMCO5AQ8N6Q1 288 aa9.27□□□□□ -0.93
SNF8-214ENST00000515174 GATSQ8NAP1 163 aa9.27□□□□□ -0.93
SNF8-214ENST00000515174 OR5M3Q8NGP4 307 aa9.27□□□□□ -0.93
SNF8-214ENST00000515174 OR9Q1Q8NGQ5 310 aa9.27□□□□□ -0.93
SNF8-214ENST00000515174 TBC1D15Q8TC07 691 aa9.27□□□□□ -0.93
SNF8-214ENST00000515174 KISS1RQ969F8 398 aaPredicted RBP9.27□□□□□ -0.93
SNF8-214ENST00000515174 ZNF524Q96C55 264 aa9.27□□□□□ -0.93
SNF8-214ENST00000515174 ERMAPQ96PL5 475 aaPredicted RBP9.27□□□□□ -0.93
SNF8-214ENST00000515174 DCUN1D5Q9BTE7 237 aa9.27□□□□□ -0.93
SNF8-214ENST00000515174 NDUFB11Q9NX14 153 aa9.27□□□□□ -0.93
SNF8-214ENST00000515174 ERVK13-1Q9NX77 482 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms