RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 IRF8Q02556 426 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 CNTN1Q12860 1018 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 TMEM115Q12893 351 aaPredicted RBP6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 TSPAN31Q12999 210 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 OPCMLQ14982 345 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 ZNF691Q5VV52 312 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 LAIR1Q6GTX8 287 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 SYT12Q8IV01 421 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 ZNF655Q8N720 491 aaPredicted RBP6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 FAM181AQ8N9Y4 354 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 SP7Q8TDD2 431 aaPredicted RBP6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 RSPRY1Q96DX4 576 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 ALKBH3Q96Q83 286 aaPredicted RBP6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 CSTL1Q9H114 145 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 SLC5A6Q9Y289 635 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 DOCK9Q9BZ29 2069 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 A0A0U1RQK1 487 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 ZNF320A2RRD8 509 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 CLDN24A6NM45 220 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 MKRN2OSH3BPM6 223 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 K7ESM1 405 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 CLIC1O00299 241 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 SERPINA3P01011 423 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 RPLP1P05386 114 aaKnown RBP6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 ZNF35P13682 527 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 FOLR2P14207 255 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 ZNF44P15621 663 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 CEBPBP17676 345 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 CSF2RBP32927 897 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 MECP2P51608 486 aaKnown RBP6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 TLE4Q04727 773 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 VMACQ2NL98 169 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 HIKESHIQ53FT3 197 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 FAM198BQ6UWH4 519 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 SHISA2Q6UWI4 295 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 TMPRSS11AQ6ZMR5 421 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 FTMTQ8N4E7 242 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 FAM98AQ8NCA5 519 aaKnown RBP6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 ZNF555Q8NEP9 628 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 CDS1Q92903 461 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 GAL3ST3Q96A11 431 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 DPH2Q9BQC3 489 aaPredicted RBP6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 RSRP1Q9BUV0 290 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 DYRK1BQ9Y463 629 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 CCDC88CQ9P219 2028 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 TBC1D3KA0A087X1G2 549 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 LOC100130705A0A1B0GUX0 176 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 LRRN3E7EW58 273 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 E9PQ18 207 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 SYT5O00445 386 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 ONECUT2O95948 504 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 LIPFP07098 398 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 ADH6P28332 368 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 MC5RP33032 325 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 VSX2P58304 361 aaPredicted RBP6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 DCAF7P61962 342 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 INSM1Q01101 510 aaPredicted RBP6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 SRSF11Q05519 484 aaKnown RBP6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 SQSTM1Q13501 440 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 DCAF10Q5QP82 559 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 TTC23Q5W5X9 447 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 VTCN1Q7Z7D3 282 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 ZDHHC21Q8IVQ6 265 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 MISPQ8IVT2 679 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 LRRC56Q8IYG6 542 aaPredicted RBP6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 LMNTD1Q8N9Z9 388 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 ACOT11Q8WXI4 607 aaPredicted RBP6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 UBE2FQ969M7 185 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 NEIL2Q969S2 332 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 PANX1Q96RD7 426 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 RAD9AQ99638 391 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 DDA1Q9BW61 102 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 LRRN3Q9H3W5 708 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 IL23AQ9NPF7 189 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 ZCCHC3Q9NUD5 404 aaKnown RBP6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 NLKQ9UBE8 527 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 FBXL3Q9UKT7 428 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 MYO7AQ13402 2215 aa6.91□□□□□ -1.3
PDLIM5-219ENST00000514743 A0A0G2JN53 185 aa6.9□□□□□ -1.3
PDLIM5-219ENST00000514743 GABRR3A8MPY1 467 aa6.9□□□□□ -1.3
PDLIM5-219ENST00000514743 M0R143 59 aa6.9□□□□□ -1.3
PDLIM5-219ENST00000514743 ACOT7O00154 380 aa6.9□□□□□ -1.3
PDLIM5-219ENST00000514743 GCM2O75603 506 aaPredicted RBP6.9□□□□□ -1.3
PDLIM5-219ENST00000514743 SRPRAP08240 638 aaKnown RBP6.9□□□□□ -1.3
PDLIM5-219ENST00000514743 ELFN1P0C7U0 828 aa6.9□□□□□ -1.3
PDLIM5-219ENST00000514743 METTL15P1P0C7V9 234 aa6.9□□□□□ -1.3
PDLIM5-219ENST00000514743 COX7A2P14406 83 aa6.9□□□□□ -1.3
PDLIM5-219ENST00000514743 APEX1P27695 318 aaKnown RBP6.9□□□□□ -1.3
PDLIM5-219ENST00000514743 ABCD3P28288 659 aa6.9□□□□□ -1.3
PDLIM5-219ENST00000514743 DAPP51397 102 aa6.9□□□□□ -1.3
PDLIM5-219ENST00000514743 DGKEP52429 567 aa6.9□□□□□ -1.3
PDLIM5-219ENST00000514743 CDH11P55287 796 aa6.9□□□□□ -1.3
PDLIM5-219ENST00000514743 MRPS10P82664 201 aaKnown RBP6.9□□□□□ -1.3
PDLIM5-219ENST00000514743 SMN1Q16637 294 aaKnown RBP6.9□□□□□ -1.3
PDLIM5-219ENST00000514743 TSTQ16762 297 aaKnown RBP6.9□□□□□ -1.3
PDLIM5-219ENST00000514743 GAB4Q2WGN9 574 aa6.9□□□□□ -1.3
PDLIM5-219ENST00000514743 MOGAT2Q3SYC2 334 aa6.9□□□□□ -1.3
PDLIM5-219ENST00000514743 ARHGAP15Q53QZ3 475 aa6.9□□□□□ -1.3
PDLIM5-219ENST00000514743 SYT6Q5T7P8 510 aaPredicted RBP6.9□□□□□ -1.3
PDLIM5-219ENST00000514743 SAXO2Q658L1 398 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms