RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 RPS15P62841 145 aaKnown RBP12.21□□□□□ -0.45
TCOF1-213ENST00000514442 SERTAD2Q14140 314 aa12.21□□□□□ -0.45
TCOF1-213ENST00000514442 LRFN4Q6PJG9 635 aa12.21□□□□□ -0.45
TCOF1-213ENST00000514442 OR4D10Q8NGI6 311 aa12.21□□□□□ -0.45
TCOF1-213ENST00000514442 EIF5A2Q9GZV4 153 aaKnown RBP12.21□□□□□ -0.45
TCOF1-213ENST00000514442 NXF2Q9GZY0 626 aaKnown RBP12.21□□□□□ -0.45
TCOF1-213ENST00000514442 RXFP3Q9NSD7 469 aa12.21□□□□□ -0.45
TCOF1-213ENST00000514442 ASIC5Q9NY37 505 aa12.21□□□□□ -0.45
TCOF1-213ENST00000514442 VDAC3Q9Y277 283 aa12.21□□□□□ -0.45
TCOF1-213ENST00000514442 VSTM2BA6NLU5 285 aa12.21□□□□□ -0.46
TCOF1-213ENST00000514442 H3BML4 177 aa12.21□□□□□ -0.46
TCOF1-213ENST00000514442 SFXN4Q6P4A7 337 aa12.21□□□□□ -0.46
TCOF1-213ENST00000514442 PITHD1Q9GZP4 211 aaPredicted RBP12.21□□□□□ -0.46
TCOF1-213ENST00000514442 RLIMQ9NVW2 624 aa12.21□□□□□ -0.46
TCOF1-213ENST00000514442 EPHA6Q9UF33 1036 aa12.21□□□□□ -0.46
TCOF1-213ENST00000514442 TRBV2A0A0J9YWF9 115 aa12.21□□□□□ -0.46
TCOF1-213ENST00000514442 GPR171O14626 319 aa12.21□□□□□ -0.46
TCOF1-213ENST00000514442 MRPL19P49406 292 aaKnown RBP12.21□□□□□ -0.46
TCOF1-213ENST00000514442 GPR18Q14330 331 aa12.21□□□□□ -0.46
TCOF1-213ENST00000514442 TMEM52BQ4KMG9 183 aa12.21□□□□□ -0.46
TCOF1-213ENST00000514442 TSSK4Q6SA08 328 aa12.21□□□□□ -0.46
TCOF1-213ENST00000514442 ZNF440Q8IYI8 595 aa12.21□□□□□ -0.46
TCOF1-213ENST00000514442 OR13H1Q8NG92 308 aa12.21□□□□□ -0.46
TCOF1-213ENST00000514442 MYADMQ96S97 322 aa12.21□□□□□ -0.46
TCOF1-213ENST00000514442 CNN2Q99439 309 aaKnown RBP12.21□□□□□ -0.46
TCOF1-213ENST00000514442 CDCP1Q9H5V8 836 aa12.21□□□□□ -0.46
TCOF1-213ENST00000514442 HHATLQ9HCP6 504 aa12.21□□□□□ -0.46
TCOF1-213ENST00000514442 POMT2Q9UKY4 750 aa12.21□□□□□ -0.46
TCOF1-213ENST00000514442 SLCO2B1O94956 709 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 CPMP14384 443 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 SLC1A3P43003 542 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 POU4F2Q12837 409 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 TDGQ13569 410 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 ACSM3Q53FZ2 586 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 UBE2NLQ5JXB2 153 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 TRIM46Q7Z4K8 759 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 CPOQ8IVL8 374 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 L3MBTL4Q8NA19 623 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 CHTF18Q8WVB6 975 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 ACOT11Q8WXI4 607 aaPredicted RBP12.2□□□□□ -0.46
TCOF1-213ENST00000514442 BABAM2Q9NXR7 383 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 LOXHD1Q8IVV2 1947 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 TRABD2BA6NFA1 517 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 FOXE1O00358 373 aaPredicted RBP12.2□□□□□ -0.46
TCOF1-213ENST00000514442 BCAT2O15382 392 aaPredicted RBP12.2□□□□□ -0.46
TCOF1-213ENST00000514442 CSF1P09603 554 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 GPX2P18283 190 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 ADH6P28332 368 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 PDZK1IP1Q13113 114 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 MFSD9Q8NBP5 474 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 C16orf58Q96GQ5 468 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 MARVELD1Q9BSK0 173 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 RPH3AQ9Y2J0 694 aaPredicted RBP12.2□□□□□ -0.46
TCOF1-213ENST00000514442 AK6Q9Y3D8 172 aaKnown RBP12.2□□□□□ -0.46
TCOF1-213ENST00000514442 ASB1Q9Y576 335 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 COL11A2P13942 1736 aaPredicted RBP12.2□□□□□ -0.46
TCOF1-213ENST00000514442 LINC01565O15544 149 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 ACTA2P62736 377 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 ACTG2P63267 376 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 KCNJ10P78508 379 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 DYRK1AQ13627 763 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 KCTD18Q6PI47 426 aaPredicted RBP12.2□□□□□ -0.46
TCOF1-213ENST00000514442 TMEM205Q6UW68 189 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 BCDIN3DQ7Z5W3 292 aaKnown RBP12.2□□□□□ -0.46
TCOF1-213ENST00000514442 DUSP18Q8NEJ0 188 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 UPRTQ96BW1 309 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 TMEM41AQ96HV5 264 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 SLC6A18Q96N87 628 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 ADOQ96SZ5 270 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 EEF1E1-BLOC1S5C9J1V9 151 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 SYNGR4O95473 234 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 SFTPDP35247 375 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 GIPRP48546 466 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 EMP2P54851 167 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 NR0B2Q15466 257 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 LTB4RQ15722 352 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 NKAIN2Q5VXU1 208 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 OR4F15Q8NGB8 312 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 SCGB3A2Q96PL1 93 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 SEC22CQ9BRL7 303 aa12.2□□□□□ -0.46
TCOF1-213ENST00000514442 KNL1Q8NG31 2342 aa12.19□□□□□ -0.46
TCOF1-213ENST00000514442 MAOAP21397 527 aa12.19□□□□□ -0.46
TCOF1-213ENST00000514442 MLF2Q15773 248 aaPredicted RBP12.19□□□□□ -0.46
TCOF1-213ENST00000514442 ZNF750Q32MQ0 723 aa12.19□□□□□ -0.46
TCOF1-213ENST00000514442 FAM219BQ5XKK7 198 aa12.19□□□□□ -0.46
TCOF1-213ENST00000514442 FOXRED2Q8IWF2 684 aa12.19□□□□□ -0.46
TCOF1-213ENST00000514442 FGF22Q9HCT0 170 aa12.19□□□□□ -0.46
TCOF1-213ENST00000514442 SMCO4Q9NRQ5 59 aa12.19□□□□□ -0.46
TCOF1-213ENST00000514442 OR5K3A6NET4 321 aa12.19□□□□□ -0.46
TCOF1-213ENST00000514442 CHP2O43745 196 aa12.19□□□□□ -0.46
TCOF1-213ENST00000514442 OPN1LWP04000 364 aa12.19□□□□□ -0.46
TCOF1-213ENST00000514442 PRR35P0CG20 571 aa12.19□□□□□ -0.46
TCOF1-213ENST00000514442 AHRP35869 848 aa12.19□□□□□ -0.46
TCOF1-213ENST00000514442 SRYQ05066 204 aa12.19□□□□□ -0.46
TCOF1-213ENST00000514442 P2RY14Q15391 338 aa12.19□□□□□ -0.46
TCOF1-213ENST00000514442 ZNF529Q6P280 563 aa12.19□□□□□ -0.46
TCOF1-213ENST00000514442 TMEM184AQ6ZMB5 413 aa12.19□□□□□ -0.46
TCOF1-213ENST00000514442 CDH26Q8IXH8 852 aa12.19□□□□□ -0.46
TCOF1-213ENST00000514442 EID2Q8N6I1 236 aa12.19□□□□□ -0.46
TCOF1-213ENST00000514442 TMEM239Q8WW34 195 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms