RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 LMBRD1Q9NUN5 540 aa2.72□□□□□ -1.97
CHD1-211ENST00000514344 CRNNQ9UBG3 495 aaPredicted RBP2.72□□□□□ -1.97
CHD1-211ENST00000514344 SUPT3HB4E1H0 165 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 ZNF587BE7ETH6 402 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 H0YIV9 168 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 UBXN8O00124 270 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 GTPBP1O00178 669 aaKnown RBP2.71□□□□□ -1.98
CHD1-211ENST00000514344 SUPT3HO75486 399 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 SASH3O75995 380 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 RSL1D1O76021 490 aaKnown RBP2.71□□□□□ -1.98
CHD1-211ENST00000514344 SEMA3DO95025 777 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 IL3P08700 152 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 OR8G3PP0DMU2 310 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 CXCR5P32302 372 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 GLRXP35754 106 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 ETV4P43268 484 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 SELENOPP49908 381 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 P2RX1P51575 399 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 NCBP2P52298 156 aaKnown RBP eCLIP2.71□□□□□ -1.98
CHD1-211ENST00000514344 GALK2Q01415 458 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 MERTKQ12866 999 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 SPA17Q15506 151 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 TEDDM1Q5T9Z0 273 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 TRMT10BQ6PF06 316 aaKnown RBP2.71□□□□□ -1.98
CHD1-211ENST00000514344 LINGO2Q7L985 606 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 AAED1Q7RTV5 226 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 FAM9CQ8IZT9 166 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 MMGT1Q8N4V1 131 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 TMEM86BQ8N661 226 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 SNX33Q8WV41 574 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 GEMIN6Q8WXD5 167 aaKnown RBP2.71□□□□□ -1.98
CHD1-211ENST00000514344 BCL2L2Q92843 193 aaPredicted RBP2.71□□□□□ -1.98
CHD1-211ENST00000514344 ZG16BQ96DA0 208 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 ERP27Q96DN0 273 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 IQCDQ96DY2 449 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 CHMP6Q96FZ7 201 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 SERPINI1Q99574 410 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 DESI2Q9BSY9 194 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 NMUR2Q9GZQ4 415 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 LACRTQ9GZZ8 138 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 SEMA6AQ9H2E6 1030 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 PPA2Q9H2U2 334 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 NELFAQ9H3P2 528 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 C16orf95Q9H693 158 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 ALG9Q9H6U8 611 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 TMEM165Q9HC07 324 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 FARSBQ9NSD9 589 aaKnown RBP2.71□□□□□ -1.98
CHD1-211ENST00000514344 GIMAP4Q9NUV9 329 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 ACOXLQ9NUZ1 547 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 EXD2Q9NVH0 621 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 AHSPQ9NZD4 102 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 SLC9A8Q9Y2E8 581 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 HUWE1Q7Z6Z7 4374 aaKnown RBP2.71□□□□□ -1.98
CHD1-211ENST00000514344 GNG14A0A1W2PPG7 69 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 CXorf49A8MYA2 514 aaPredicted RBP2.71□□□□□ -1.98
CHD1-211ENST00000514344 SPRY3O43610 288 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 MGRN1O60291 552 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 TSPAN9O75954 239 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 KCNK2O95069 426 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 ZNF205O95201 554 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 HLA-HP01893 362 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 TPM1P09493 284 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 CD79AP11912 226 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 CBR1P16152 277 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 ZNF14P17017 642 aaPredicted RBP2.71□□□□□ -1.98
CHD1-211ENST00000514344 IER3P46695 156 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 SLC16A1P53985 500 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 SLC12A2P55011 1212 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 OR2B6P58173 313 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 FGF12P61328 243 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 ERVS71-1P61550 626 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 TEKQ02763 1124 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 GALNT1Q10472 559 aaPredicted RBP2.71□□□□□ -1.98
CHD1-211ENST00000514344 PDK3Q15120 406 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 RASA2Q15283 850 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 TRMT5Q32P41 509 aaKnown RBP2.71□□□□□ -1.98
CHD1-211ENST00000514344 TTMPQ5BVD1 217 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 LIPJQ5W064 366 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 CLEC6AQ6EIG7 209 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 LRIG3Q6UXM1 1119 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 GDPGP1Q6ZNW5 385 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 ABHD12BQ7Z5M8 362 aaPredicted RBP2.71□□□□□ -1.98
CHD1-211ENST00000514344 C1orf52Q8N6N3 182 aaKnown RBP2.71□□□□□ -1.98
CHD1-211ENST00000514344 POU5F2Q8N7G0 328 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 LRRC57Q8N9N7 239 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 POMGNT2Q8NAT1 580 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 TRPC4APQ8TEL6 797 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 GATAD1Q8WUU5 269 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 RCHY1Q96PM5 261 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 CITED2Q99967 270 aaPredicted RBP2.71□□□□□ -1.98
CHD1-211ENST00000514344 DERL2Q9GZP9 239 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 IPPKQ9H8X2 491 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 C3orf14Q9HBI5 128 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 SLC35C2Q9NQQ7 365 aa2.71□□□□□ -1.98
CHD1-211ENST00000514344 ZNF346Q9UL40 294 aaKnown RBP2.71□□□□□ -1.98
CHD1-211ENST00000514344 C19orf53Q9UNZ5 99 aaPredicted RBP2.71□□□□□ -1.98
CHD1-211ENST00000514344 A0A0U1RQK1 487 aa2.7□□□□□ -1.98
CHD1-211ENST00000514344 A0A1B0GW55 424 aa2.7□□□□□ -1.98
CHD1-211ENST00000514344 J3QL48 77 aa2.7□□□□□ -1.98
CHD1-211ENST00000514344 UPK3AO75631 287 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms