RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 TAAR8Q969N4 342 aa13.58□□□□□ -0.24
VCAN-211ENST00000513984 CMKLR1Q99788 373 aa13.58□□□□□ -0.24
VCAN-211ENST00000513984 SIAEQ9HAT2 523 aa13.58□□□□□ -0.24
VCAN-211ENST00000513984 TRAV36DV7A0A075B6V5 113 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 ANKUB1A6NFN9 424 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 BLOC1S5-TXNDC5H3BN57 136 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 IMPA2O14732 288 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 NPIPB7O75200 414 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 GYPBP06028 91 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 CD14P08571 375 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 GABRA5P31644 462 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 IDUAP35475 653 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 SLC16A1P53985 500 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 ERVK-25P63136 954 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 GALEQ14376 348 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 ALG10Q5BKT4 473 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 TMPRSS11AQ6ZMR5 421 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 MFSD4AQ8N468 514 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 TIMP4Q99727 224 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 ALG8Q9BVK2 526 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 ASPNQ9BXN1 380 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 NMNAT2Q9BZQ4 307 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 KLHL1Q9NR64 748 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 AKAP7Q9P0M2 348 aaPredicted RBP13.57□□□□□ -0.24
VCAN-211ENST00000513984 IGHV1-45A0A0A0MS14 117 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 TMED7-TICAM2A0A0A6YYA0 188 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 A0A1B0GVG6 124 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 DAPL1A0PJW8 107 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 J3QRK9 145 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 PLD2O14939 933 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 TXNDC12O95881 172 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 MT-ATP6P00846 226 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 SOX6P35712 828 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 RPS5P46782 204 aaKnown RBP13.57□□□□□ -0.24
VCAN-211ENST00000513984 DLX5P56178 289 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 RPS25P62851 125 aaKnown RBP13.57□□□□□ -0.24
VCAN-211ENST00000513984 ACTC1P68032 377 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 ACTA1P68133 377 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 RPL18Q07020 188 aaKnown RBP13.57□□□□□ -0.24
VCAN-211ENST00000513984 DBPQ10586 325 aaPredicted RBP13.57□□□□□ -0.24
VCAN-211ENST00000513984 LCN1P1Q5VSP4 162 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 FAM69BQ5VUD6 431 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 CD200R1LQ6Q8B3 271 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 NANOGNBQ7Z5D8 188 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 ADGRG3Q86Y34 549 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 OR10H4Q8NGA5 316 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 SLC22A8Q8TCC7 542 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 TMEM234Q8WY98 164 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 ST8SIA1Q92185 356 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 RASD2Q96D21 266 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 PTDSS2Q9BVG9 487 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 NDEL1Q9GZM8 345 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 ZNF700Q9H0M5 742 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 TXNL4BQ9NX01 149 aaKnown RBP13.57□□□□□ -0.24
VCAN-211ENST00000513984 TMED7Q9Y3B3 224 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 PTRH2Q9Y3E5 179 aaKnown RBP13.57□□□□□ -0.24
VCAN-211ENST00000513984 GPR179Q6PRD1 2367 aa13.57□□□□□ -0.24
VCAN-211ENST00000513984 TEX13CA0A0J9YWL9 993 aa13.56□□□□□ -0.24
VCAN-211ENST00000513984 TEX51A0A1B0GUA7 166 aa13.56□□□□□ -0.24
VCAN-211ENST00000513984 SLC30A4O14863 429 aa13.56□□□□□ -0.24
VCAN-211ENST00000513984 SUSD5O60279 629 aa13.56□□□□□ -0.24
VCAN-211ENST00000513984 SLC25A12O75746 678 aa13.56□□□□□ -0.24
VCAN-211ENST00000513984 DKK1O94907 266 aa13.56□□□□□ -0.24
VCAN-211ENST00000513984 WISP1O95388 367 aa13.56□□□□□ -0.24
VCAN-211ENST00000513984 MRPL3P09001 348 aaKnown RBP13.56□□□□□ -0.24
VCAN-211ENST00000513984 FBXO45P0C2W1 286 aa13.56□□□□□ -0.24
VCAN-211ENST00000513984 BMP4P12644 408 aa13.56□□□□□ -0.24
VCAN-211ENST00000513984 CD59P13987 128 aa13.56□□□□□ -0.24
VCAN-211ENST00000513984 SDHAP31040 664 aa13.56□□□□□ -0.24
VCAN-211ENST00000513984 HTR3AP46098 478 aa13.56□□□□□ -0.24
VCAN-211ENST00000513984 RAB15P59190 212 aa13.56□□□□□ -0.24
VCAN-211ENST00000513984 LGALS3BPQ08380 585 aa13.56□□□□□ -0.24
VCAN-211ENST00000513984 IL10RAQ13651 578 aa13.56□□□□□ -0.24
VCAN-211ENST00000513984 SLC35D3Q5M8T2 416 aa13.56□□□□□ -0.24
VCAN-211ENST00000513984 C5orf46Q6UWT4 87 aa13.56□□□□□ -0.24
VCAN-211ENST00000513984 POMGNT2Q8NAT1 580 aa13.56□□□□□ -0.24
VCAN-211ENST00000513984 GALNT6Q8NCL4 622 aa13.56□□□□□ -0.24
VCAN-211ENST00000513984 OR2Y1Q8NGV0 311 aa13.56□□□□□ -0.24
VCAN-211ENST00000513984 STK35Q8TDR2 534 aa13.56□□□□□ -0.24
VCAN-211ENST00000513984 SMPDL3BQ92485 455 aa13.56□□□□□ -0.24
VCAN-211ENST00000513984 NMNAT3Q96T66 252 aa13.56□□□□□ -0.24
VCAN-211ENST00000513984 DEFB126Q9BYW3 111 aa13.56□□□□□ -0.24
VCAN-211ENST00000513984 B3GNT3Q9Y2A9 372 aa13.56□□□□□ -0.24
VCAN-211ENST00000513984 YARS2Q9Y2Z4 477 aaKnown RBP13.56□□□□□ -0.24
VCAN-211ENST00000513984 B3GALT1Q9Y5Z6 326 aa13.56□□□□□ -0.24
VCAN-211ENST00000513984 PNMA8CA0A1B0GUJ8 204 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 TMEM72A0PK05 275 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 OR6C68A6NDL8 312 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 A8MVM7 634 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 B4DXG7 233 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 CDX4O14627 284 aaPredicted RBP13.55□□□□□ -0.24
VCAN-211ENST00000513984 OR2J2O76002 312 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 HIST1H2ABP04908 130 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 COX6A1P12074 109 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 FGF9P31371 208 aaPredicted RBP13.55□□□□□ -0.24
VCAN-211ENST00000513984 CTXN1P60606 82 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 GPR50Q13585 617 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 NTRK2Q16620 822 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 BTBD16Q32M84 506 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 EMC4Q5J8M3 183 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms