RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 SIRPAP78324 504 aa10.12□□□□□ -0.79
HTT-213ENST00000513806 PDSS1Q5T2R2 415 aa10.12□□□□□ -0.79
HTT-213ENST00000513806 SWT1Q5T5J6 900 aaKnown RBP10.12□□□□□ -0.79
HTT-213ENST00000513806 NSUN5P2Q63ZY6 315 aa10.12□□□□□ -0.79
HTT-213ENST00000513806 ANKRD34AQ69YU3 496 aa10.12□□□□□ -0.79
HTT-213ENST00000513806 HMBOX1Q6NT76 420 aa10.12□□□□□ -0.79
HTT-213ENST00000513806 ZNF730Q6ZMV8 503 aa10.12□□□□□ -0.79
HTT-213ENST00000513806 FCRLAQ7L513 359 aa10.12□□□□□ -0.79
HTT-213ENST00000513806 SLC46A3Q7Z3Q1 461 aa10.12□□□□□ -0.79
HTT-213ENST00000513806 PIWIL3Q7Z3Z3 882 aaKnown RBP10.12□□□□□ -0.79
HTT-213ENST00000513806 HS3ST5Q8IZT8 346 aa10.12□□□□□ -0.79
HTT-213ENST00000513806 INTS12Q96CB8 462 aaKnown RBP10.12□□□□□ -0.79
HTT-213ENST00000513806 FAM46AQ96IP4 442 aaKnown RBP10.12□□□□□ -0.79
HTT-213ENST00000513806 DHRS1Q96LJ7 313 aa10.12□□□□□ -0.79
HTT-213ENST00000513806 FUZQ9BT04 418 aa10.12□□□□□ -0.79
HTT-213ENST00000513806 TMEM43Q9BTV4 400 aa10.12□□□□□ -0.79
HTT-213ENST00000513806 POTEKPQ9BYX7 375 aa10.12□□□□□ -0.79
HTT-213ENST00000513806 POLR2J2Q9GZM3 115 aaKnown RBP10.12□□□□□ -0.79
HTT-213ENST00000513806 POLR2J3Q9H1A7 115 aaKnown RBP10.12□□□□□ -0.79
HTT-213ENST00000513806 CCM2LQ9NUG4 571 aaPredicted RBP10.12□□□□□ -0.79
HTT-213ENST00000513806 STOML1Q9UBI4 398 aa10.12□□□□□ -0.79
HTT-213ENST00000513806 Q9UFV3 132 aa10.12□□□□□ -0.79
HTT-213ENST00000513806 HDGFL3Q9Y3E1 203 aa10.12□□□□□ -0.79
HTT-213ENST00000513806 MYO18BQ8IUG5 2567 aa10.11□□□□□ -0.79
HTT-213ENST00000513806 CD8B2A6NJW9 211 aa10.11□□□□□ -0.79
HTT-213ENST00000513806 M0R082 166 aa10.11□□□□□ -0.79
HTT-213ENST00000513806 TNFRSF11BO00300 401 aa10.11□□□□□ -0.79
HTT-213ENST00000513806 HPRP00739 348 aa10.11□□□□□ -0.79
HTT-213ENST00000513806 CST1P01037 141 aa10.11□□□□□ -0.79
HTT-213ENST00000513806 UMPSP11172 480 aa10.11□□□□□ -0.79
HTT-213ENST00000513806 GABRA1P14867 456 aa10.11□□□□□ -0.79
HTT-213ENST00000513806 ITGA2P17301 1181 aa10.11□□□□□ -0.79
HTT-213ENST00000513806 EDNRAP25101 427 aa10.11□□□□□ -0.79
HTT-213ENST00000513806 P2RY4P51582 365 aa10.11□□□□□ -0.79
HTT-213ENST00000513806 RAC3P60763 192 aa10.11□□□□□ -0.79
HTT-213ENST00000513806 ACTR3P61158 418 aa10.11□□□□□ -0.79
HTT-213ENST00000513806 C4orf17Q53FE4 359 aa10.11□□□□□ -0.79
HTT-213ENST00000513806 OTUD3Q5T2D3 398 aaPredicted RBP10.11□□□□□ -0.79
HTT-213ENST00000513806 OR2T5Q6IEZ7 315 aa10.11□□□□□ -0.79
HTT-213ENST00000513806 VWA1Q6PCB0 445 aa10.11□□□□□ -0.79
HTT-213ENST00000513806 AMIGO2Q86SJ2 522 aa10.11□□□□□ -0.79
HTT-213ENST00000513806 LIX1LQ8IVB5 337 aa10.11□□□□□ -0.79
HTT-213ENST00000513806 OR9Q2Q8NGE9 314 aa10.11□□□□□ -0.79
HTT-213ENST00000513806 OR4C15Q8NGM1 316 aa10.11□□□□□ -0.79
HTT-213ENST00000513806 OR2T29Q8NH02 315 aa10.11□□□□□ -0.79
HTT-213ENST00000513806 ZNF417Q8TAU3 575 aa10.11□□□□□ -0.79
HTT-213ENST00000513806 ACOT11Q8WXI4 607 aaPredicted RBP10.11□□□□□ -0.79
HTT-213ENST00000513806 LRTOMTQ8WZ04 291 aa10.11□□□□□ -0.79
HTT-213ENST00000513806 MPP4Q96JB8 637 aa10.11□□□□□ -0.79
HTT-213ENST00000513806 ALPK1Q96QP1 1244 aa10.11□□□□□ -0.79
HTT-213ENST00000513806 ZNF587Q96SQ5 575 aaPredicted RBP10.11□□□□□ -0.79
HTT-213ENST00000513806 GPA33Q99795 319 aa10.11□□□□□ -0.79
HTT-213ENST00000513806 TAPBPLQ9BX59 468 aa10.11□□□□□ -0.79
HTT-213ENST00000513806 CALHM2Q9HA72 323 aa10.11□□□□□ -0.79
HTT-213ENST00000513806 C6orf203Q9P0P8 240 aaPredicted RBP10.11□□□□□ -0.79
HTT-213ENST00000513806 ING1Q9UK53 422 aaPredicted RBP10.11□□□□□ -0.79
HTT-213ENST00000513806 MCTS1Q9ULC4 181 aaKnown RBP10.11□□□□□ -0.79
HTT-213ENST00000513806 MED31Q9Y3C7 131 aa10.11□□□□□ -0.79
HTT-213ENST00000513806 MAGED1Q9Y5V3 778 aaPredicted RBP10.11□□□□□ -0.79
HTT-213ENST00000513806 LYVE1Q9Y5Y7 322 aa10.11□□□□□ -0.79
HTT-213ENST00000513806 HCFC1P51610 2035 aa10.11□□□□□ -0.79
HTT-213ENST00000513806 SH3PXD2BA1X283 911 aa10.1□□□□□ -0.79
HTT-213ENST00000513806 MBD3L4A6NDZ8 208 aaPredicted RBP10.1□□□□□ -0.79
HTT-213ENST00000513806 MBD3L3A6NE82 208 aaPredicted RBP10.1□□□□□ -0.79
HTT-213ENST00000513806 MBD3L5A6NJ08 208 aaPredicted RBP10.1□□□□□ -0.79
HTT-213ENST00000513806 E9PLN8 166 aa10.1□□□□□ -0.79
HTT-213ENST00000513806 C11orf98E9PRG8 122 aa10.1□□□□□ -0.79
HTT-213ENST00000513806 H3BNX3 289 aa10.1□□□□□ -0.79
HTT-213ENST00000513806 CDC42EP2O14613 210 aa10.1□□□□□ -0.79
HTT-213ENST00000513806 ZG16O60844 167 aa10.1□□□□□ -0.79
HTT-213ENST00000513806 SERPINI2O75830 405 aa10.1□□□□□ -0.79
HTT-213ENST00000513806 KRT36O76013 467 aa10.1□□□□□ -0.79
HTT-213ENST00000513806 THRBP10828 461 aa10.1□□□□□ -0.79
HTT-213ENST00000513806 HLA-DOBP13765 273 aa10.1□□□□□ -0.79
HTT-213ENST00000513806 IFNA8P32881 189 aa10.1□□□□□ -0.79
HTT-213ENST00000513806 RBM34P42696 430 aaKnown RBP10.1□□□□□ -0.79
HTT-213ENST00000513806 LIMS1P48059 325 aa10.1□□□□□ -0.79
HTT-213ENST00000513806 CLK1P49759 484 aaKnown RBP10.1□□□□□ -0.79
HTT-213ENST00000513806 CSNK2A1P68400 391 aaPredicted RBP10.1□□□□□ -0.79
HTT-213ENST00000513806 SLC35A1P78382 337 aa10.1□□□□□ -0.79
HTT-213ENST00000513806 IL1RL1Q01638 556 aa10.1□□□□□ -0.79
HTT-213ENST00000513806 ZNF74Q16587 644 aa10.1□□□□□ -0.79
HTT-213ENST00000513806 FAM69AQ5T7M9 428 aa10.1□□□□□ -0.79
HTT-213ENST00000513806 MBOAT2Q6ZWT7 520 aa10.1□□□□□ -0.79
HTT-213ENST00000513806 ZNF771Q7L3S4 317 aaPredicted RBP10.1□□□□□ -0.79
HTT-213ENST00000513806 GPAT4Q86UL3 456 aa10.1□□□□□ -0.79
HTT-213ENST00000513806 WDFY1Q8IWB7 410 aa10.1□□□□□ -0.79
HTT-213ENST00000513806 TUSC5Q8IXB3 177 aa10.1□□□□□ -0.79
HTT-213ENST00000513806 CNEP1R1Q8N9A8 125 aa10.1□□□□□ -0.79
HTT-213ENST00000513806 PAPD5Q8NDF8 572 aaKnown RBP10.1□□□□□ -0.79
HTT-213ENST00000513806 OR4K5Q8NGD3 323 aa10.1□□□□□ -0.79
HTT-213ENST00000513806 OR13C2Q8NGS9 318 aa10.1□□□□□ -0.79
HTT-213ENST00000513806 MFSD8Q8NHS3 518 aa10.1□□□□□ -0.79
HTT-213ENST00000513806 MBD3L2Q8NHZ7 208 aaPredicted RBP10.1□□□□□ -0.79
HTT-213ENST00000513806 RNF128Q8TEB7 428 aa10.1□□□□□ -0.79
HTT-213ENST00000513806 CPNE4Q96A23 557 aaPredicted RBP10.1□□□□□ -0.79
HTT-213ENST00000513806 SGTBQ96EQ0 304 aa10.1□□□□□ -0.79
HTT-213ENST00000513806 ZNF347Q96SE7 839 aa10.1□□□□□ -0.79
HTT-213ENST00000513806 EPYCQ99645 322 aa10.1□□□□□ -0.79
HTT-213ENST00000513806 VKORC1Q9BQB6 163 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms