RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 TMEM72A0PK05 275 aa9.41□□□□□ -0.9
DDX41-216ENST00000513562 OR6C65A6NJZ3 312 aa9.41□□□□□ -0.9
DDX41-216ENST00000513562 G3V2L1 256 aa9.41□□□□□ -0.9
DDX41-216ENST00000513562 M0R233 179 aa9.41□□□□□ -0.9
DDX41-216ENST00000513562 LSM1O15116 133 aaKnown RBP9.41□□□□□ -0.9
DDX41-216ENST00000513562 SYNGR3O43761 229 aa9.41□□□□□ -0.9
DDX41-216ENST00000513562 KRT33AO76009 404 aa9.41□□□□□ -0.9
DDX41-216ENST00000513562 C6orf47O95873 294 aa9.41□□□□□ -0.9
DDX41-216ENST00000513562 BCKDHAP12694 445 aa9.41□□□□□ -0.9
DDX41-216ENST00000513562 HOXB1P14653 301 aaPredicted RBP9.41□□□□□ -0.9
DDX41-216ENST00000513562 CBR1P16152 277 aa9.41□□□□□ -0.9
DDX41-216ENST00000513562 COL8A2P25067 703 aa9.41□□□□□ -0.9
DDX41-216ENST00000513562 HTR3AP46098 478 aa9.41□□□□□ -0.9
DDX41-216ENST00000513562 EVX1P49640 407 aa9.41□□□□□ -0.9
DDX41-216ENST00000513562 RPS26P62854 115 aaKnown RBP9.41□□□□□ -0.9
DDX41-216ENST00000513562 MRPS11P82912 194 aaKnown RBP9.41□□□□□ -0.9
DDX41-216ENST00000513562 MYBPC1Q00872 1141 aa9.41□□□□□ -0.9
DDX41-216ENST00000513562 SNTB2Q13425 540 aaKnown RBP9.41□□□□□ -0.9
DDX41-216ENST00000513562 MSMPQ1L6U9 139 aa9.41□□□□□ -0.9
DDX41-216ENST00000513562 ARHGAP11BQ3KRB8 267 aa9.41□□□□□ -0.9
DDX41-216ENST00000513562 ATP6AP1LQ52LC2 224 aa9.41□□□□□ -0.9
DDX41-216ENST00000513562 OTUD3Q5T2D3 398 aaPredicted RBP9.41□□□□□ -0.9
DDX41-216ENST00000513562 LIPMQ5VYY2 423 aa9.41□□□□□ -0.9
DDX41-216ENST00000513562 LINGO2Q7L985 606 aa9.41□□□□□ -0.9
DDX41-216ENST00000513562 TMEM99Q8N816 258 aa9.41□□□□□ -0.9
DDX41-216ENST00000513562 OR4M2Q8NGB6 313 aa9.41□□□□□ -0.9
DDX41-216ENST00000513562 OR5AK3PQ8NH89 298 aa9.41□□□□□ -0.9
DDX41-216ENST00000513562 PMM1Q92871 262 aa9.41□□□□□ -0.9
DDX41-216ENST00000513562 MS4A5Q9H3V2 200 aa9.41□□□□□ -0.9
DDX41-216ENST00000513562 UNKLQ9H9P5 680 aaKnown RBP9.41□□□□□ -0.9
DDX41-216ENST00000513562 NTN4Q9HB63 628 aa9.41□□□□□ -0.9
DDX41-216ENST00000513562 NOX3Q9HBY0 568 aa9.41□□□□□ -0.9
DDX41-216ENST00000513562 ZNF275Q9NSD4 429 aaPredicted RBP9.41□□□□□ -0.9
DDX41-216ENST00000513562 REV1Q9UBZ9 1251 aa9.41□□□□□ -0.9
DDX41-216ENST00000513562 OSGIN1Q9UJX0 560 aa9.41□□□□□ -0.9
DDX41-216ENST00000513562 TMED7Q9Y3B3 224 aa9.41□□□□□ -0.9
DDX41-216ENST00000513562 CMAHPQ9Y471 501 aa9.41□□□□□ -0.9
DDX41-216ENST00000513562 CMYA5Q8N3K9 4069 aa9.41□□□□□ -0.9
DDX41-216ENST00000513562 ZC3H12DA2A288 527 aaKnown RBP9.4□□□□□ -0.9
DDX41-216ENST00000513562 AQP7P3A6NL99 342 aa9.4□□□□□ -0.9
DDX41-216ENST00000513562 DUXAA6NLW8 204 aa9.4□□□□□ -0.9
DDX41-216ENST00000513562 J3QLI3 93 aa9.4□□□□□ -0.9
DDX41-216ENST00000513562 SKAP2O75563 359 aaPredicted RBP9.4□□□□□ -0.9
DDX41-216ENST00000513562 RP2O75695 350 aa9.4□□□□□ -0.9
DDX41-216ENST00000513562 FSHBP01225 129 aa9.4□□□□□ -0.9
DDX41-216ENST00000513562 GUSBP08236 651 aa9.4□□□□□ -0.9
DDX41-216ENST00000513562 ANPEPP15144 967 aa9.4□□□□□ -0.9
DDX41-216ENST00000513562 ADRA2CP18825 462 aa9.4□□□□□ -0.9
DDX41-216ENST00000513562 RPL3P39023 403 aaKnown RBP9.4□□□□□ -0.9
DDX41-216ENST00000513562 IDH2P48735 452 aaKnown RBP9.4□□□□□ -0.9
DDX41-216ENST00000513562 SELENOPP49908 381 aa9.4□□□□□ -0.9
DDX41-216ENST00000513562 POLR2HP52434 150 aaKnown RBP9.4□□□□□ -0.9
DDX41-216ENST00000513562 MAP2K6P52564 334 aa9.4□□□□□ -0.9
DDX41-216ENST00000513562 SH3BGRP55822 239 aaPredicted RBP9.4□□□□□ -0.9
DDX41-216ENST00000513562 SLC7A5Q01650 507 aa9.4□□□□□ -0.9
DDX41-216ENST00000513562 DAG1Q14118 895 aa9.4□□□□□ -0.9
DDX41-216ENST00000513562 TUSC1Q2TAM9 212 aa9.4□□□□□ -0.9
DDX41-216ENST00000513562 LSM12Q3MHD2 195 aaKnown RBP9.4□□□□□ -0.9
DDX41-216ENST00000513562 TYW3Q6IPR3 259 aaKnown RBP9.4□□□□□ -0.9
DDX41-216ENST00000513562 KRT80Q6KB66 452 aa9.4□□□□□ -0.9
DDX41-216ENST00000513562 ACSM5Q6NUN0 579 aa9.4□□□□□ -0.9
DDX41-216ENST00000513562 ZYG11AQ6WRX3 759 aa9.4□□□□□ -0.9
DDX41-216ENST00000513562 GPAT4Q86UL3 456 aa9.4□□□□□ -0.9
DDX41-216ENST00000513562 RIBC1Q8N443 379 aaPredicted RBP9.4□□□□□ -0.9
DDX41-216ENST00000513562 NANPQ8TBE9 248 aa9.4□□□□□ -0.9
DDX41-216ENST00000513562 YIPF5Q969M3 257 aa9.4□□□□□ -0.9
DDX41-216ENST00000513562 MRPL37Q9BZE1 423 aaKnown RBP9.4□□□□□ -0.9
DDX41-216ENST00000513562 TUBB1Q9H4B7 451 aa9.4□□□□□ -0.9
DDX41-216ENST00000513562 EMCNQ9ULC0 261 aa9.4□□□□□ -0.9
DDX41-216ENST00000513562 PPIAL4AQ9Y536 164 aa9.4□□□□□ -0.9
DDX41-216ENST00000513562 ZNF503-AS2A6NEH8 195 aa9.39□□□□□ -0.91
DDX41-216ENST00000513562 LIPT2A6NK58 231 aa9.39□□□□□ -0.91
DDX41-216ENST00000513562 TMEM229AB2RXF0 380 aa9.39□□□□□ -0.91
DDX41-216ENST00000513562 AP3D1O14617 1153 aa9.39□□□□□ -0.91
DDX41-216ENST00000513562 PIP5K1BO14986 540 aa9.39□□□□□ -0.91
DDX41-216ENST00000513562 PPIHO43447 177 aaKnown RBP9.39□□□□□ -0.91
DDX41-216ENST00000513562 UPK3AO75631 287 aa9.39□□□□□ -0.91
DDX41-216ENST00000513562 NCR1O76036 304 aa9.39□□□□□ -0.91
DDX41-216ENST00000513562 PRSS23O95084 383 aa9.39□□□□□ -0.91
DDX41-216ENST00000513562 AKR7A3O95154 331 aa9.39□□□□□ -0.91
DDX41-216ENST00000513562 MPZL1O95297 269 aa9.39□□□□□ -0.91
DDX41-216ENST00000513562 GSNP06396 782 aa9.39□□□□□ -0.91
DDX41-216ENST00000513562 GPIP06744 558 aa9.39□□□□□ -0.91
DDX41-216ENST00000513562 MYL2P10916 166 aa9.39□□□□□ -0.91
DDX41-216ENST00000513562 TCN1P20061 433 aaPredicted RBP9.39□□□□□ -0.91
DDX41-216ENST00000513562 MATN1P21941 496 aa9.39□□□□□ -0.91
DDX41-216ENST00000513562 NR4A1P22736 598 aa9.39□□□□□ -0.91
DDX41-216ENST00000513562 ZFP36P26651 326 aaKnown RBP9.39□□□□□ -0.91
DDX41-216ENST00000513562 GCAP28676 217 aa9.39□□□□□ -0.91
DDX41-216ENST00000513562 TACR3P29371 465 aa9.39□□□□□ -0.91
DDX41-216ENST00000513562 ARR3P36575 388 aa9.39□□□□□ -0.91
DDX41-216ENST00000513562 P2RY4P51582 365 aa9.39□□□□□ -0.91
DDX41-216ENST00000513562 DNAJB13P59910 316 aa9.39□□□□□ -0.91
DDX41-216ENST00000513562 ETF1P62495 437 aaKnown RBP9.39□□□□□ -0.91
DDX41-216ENST00000513562 HBA1P69905 142 aa9.39□□□□□ -0.91
DDX41-216ENST00000513562 CEACAM7Q14002 265 aa9.39□□□□□ -0.91
DDX41-216ENST00000513562 FAM153CQ494X1 144 aa9.39□□□□□ -0.91
DDX41-216ENST00000513562 GALNTL6Q49A17 601 aa9.39□□□□□ -0.91
DDX41-216ENST00000513562 ZNF311Q5JNZ3 666 aa9.39□□□□□ -0.91
DDX41-216ENST00000513562 CFAP157Q5JU67 520 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms