RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 RBMXP38159 391 aaKnown RBP3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 MARCKSL1P49006 195 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 CLDN20P56880 219 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 UBA52P62987 128 aaKnown RBP3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 TNFRSF17Q02223 184 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 PLCXD2Q0VAA5 305 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 KIF5AQ12840 1032 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 OASLQ15646 514 aaKnown RBP3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 TPSAB1Q15661 275 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 PAGE2BQ5JRK9 111 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 CDKL4Q5MAI5 379 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 VAX1Q5SQQ9 334 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 C6orf163Q5TEZ5 329 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 DGAT2L7PQ6IED9 249 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 MFSD12Q6NUT3 480 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 SHQ1Q6PI26 577 aaKnown RBP3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 RBMS3Q6XE24 437 aaKnown RBP3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 ZNF786Q8N393 782 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 SVOPLQ8N434 492 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 SPATA6LQ8N4H0 392 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 ZDHHC22Q8N966 263 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 FADS6Q8N9I5 356 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 OR4K17Q8NGC6 315 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 FAM110BQ8TC76 370 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 TMEM186Q96B77 213 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 OMA1Q96E52 524 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 CMTM7Q96FZ5 175 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 TSNARE1Q96NA8 513 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 SERPINB12Q96P63 405 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 NPAS1Q99742 590 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 CENPKQ9BS16 269 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 FAM167BQ9BTA0 163 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 SORBS1Q9BX66 1292 aaKnown RBP3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 MS4A8Q9BY19 250 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 BPESC1Q9GZL8 116 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 RAB1BQ9H0U4 201 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 GOLPH3Q9H4A6 298 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 CNOT10Q9H9A5 744 aaKnown RBP3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 NHEJ1Q9H9Q4 299 aaPredicted RBP3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 FOLH1BQ9HBA9 442 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 SLC52A3Q9NQ40 469 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 TIGARQ9NQ88 270 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 ARL8BQ9NVJ2 186 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 LYARQ9NX58 379 aaKnown RBP3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 PRODH2Q9UF12 536 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 KLHL21Q9UJP4 597 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 FBXL2Q9UKC9 423 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 POU2F3Q9UKI9 436 aa3.16□□□□□ -1.9
PDLIM5-218ENST00000513341 PCNX3Q9H6A9 2034 aa3.15□□□□□ -1.9
PDLIM5-218ENST00000513341 A0A087WZY1 265 aa3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 LRP5LA4QPB2 252 aa3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 HMX3A6NHT5 357 aa3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 SDR42E2A6NKP2 422 aa3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 ZNF814B7Z6K7 855 aa3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 H0YC42 278 aa3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 CLDN34H7C241 214 aa3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 J3QLI3 93 aa3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 FOXE1O00358 373 aaPredicted RBP3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 TIMM23O14925 209 aa3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 SEC14L5O43304 696 aa3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 TSPAN2O60636 221 aa3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 PDE5AO76074 875 aa3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 LY6HO94772 140 aa3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 GUCA1CO95843 209 aa3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 PNPP00491 289 aa3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 IFNB1P01574 187 aa3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 ERCC1P07992 297 aaPredicted RBP3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 MLNP12872 115 aa3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 PORP16435 677 aaPredicted RBP3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 ZNF17P17021 662 aa3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 ADRA2CP18825 462 aa3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 GGT1P19440 569 aa3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 KRT20P35900 424 aa3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 SSR2P43308 183 aa3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 MAGEA1P43355 309 aa3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 OR3A2P47893 321 aa3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 IDH3GP51553 393 aaPredicted RBP3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 XKP51811 444 aa3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 GAS1P54826 345 aa3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 TPD52P55327 224 aaPredicted RBP3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 UBASH3AP57075 661 aa3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 CARD18P57730 90 aa3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 RPL15P61313 204 aaKnown RBP3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 SNRPD2P62316 118 aaKnown RBP3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 CRADDP78560 199 aa3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 C17orf67Q0P5P2 114 aa3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 RASGEF1BQ0VAM2 473 aa3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 DHX34Q14147 1143 aaKnown RBP3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 ZNHIT3Q15649 155 aaPredicted RBP3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 PPP1R3AQ16821 1122 aa3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 TMEM44Q2T9K0 475 aa3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 CPTPQ5TA50 214 aa3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 KHDRBS2Q5VWX1 349 aaKnown RBP3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 RAET1LQ5VY80 246 aa3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 SAXO2Q658L1 398 aa3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 OR5M10Q6IEU7 315 aa3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 OR52E8Q6IFG1 317 aa3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 OR7E24Q6IFN5 339 aa3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 CES3Q6UWW8 571 aa3.15□□□□□ -1.91
PDLIM5-218ENST00000513341 TFAP2EQ6VUC0 442 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms