RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 APOPT1Q96IL0 206 aa9.63□□□□□ -0.87
RNF4-218ENST00000513284 OR11A1Q9GZK7 315 aa9.63□□□□□ -0.87
RNF4-218ENST00000513284 TUBB1Q9H4B7 451 aa9.63□□□□□ -0.87
RNF4-218ENST00000513284 ZNF442Q9H7R0 627 aa9.63□□□□□ -0.87
RNF4-218ENST00000513284 EXD2Q9NVH0 621 aa9.63□□□□□ -0.87
RNF4-218ENST00000513284 MED29Q9NX70 200 aa9.63□□□□□ -0.87
RNF4-218ENST00000513284 OPN4Q9UHM6 478 aa9.63□□□□□ -0.87
RNF4-218ENST00000513284 PCDHGB4Q9UN71 923 aa9.63□□□□□ -0.87
RNF4-218ENST00000513284 WNK1Q9H4A3 2382 aa9.63□□□□□ -0.87
RNF4-218ENST00000513284 CENPVL1A0A0U1RR11 272 aa9.62□□□□□ -0.87
RNF4-218ENST00000513284 PEX11AO75192 247 aa9.62□□□□□ -0.87
RNF4-218ENST00000513284 BCAS1O75363 584 aaPredicted RBP9.62□□□□□ -0.87
RNF4-218ENST00000513284 PMS2P2O95744 297 aa9.62□□□□□ -0.87
RNF4-218ENST00000513284 AGR2O95994 175 aa9.62□□□□□ -0.87
RNF4-218ENST00000513284 BCL10O95999 233 aa9.62□□□□□ -0.87
RNF4-218ENST00000513284 TFP02787 698 aa9.62□□□□□ -0.87
RNF4-218ENST00000513284 FKBP2P26885 142 aaKnown RBP9.62□□□□□ -0.87
RNF4-218ENST00000513284 SLC1A3P43003 542 aa9.62□□□□□ -0.87
RNF4-218ENST00000513284 GPR6P46095 362 aaPredicted RBP9.62□□□□□ -0.87
RNF4-218ENST00000513284 TGFBR3Q03167 851 aa9.62□□□□□ -0.87
RNF4-218ENST00000513284 MERTKQ12866 999 aa9.62□□□□□ -0.87
RNF4-218ENST00000513284 SKP2Q13309 424 aa9.62□□□□□ -0.87
RNF4-218ENST00000513284 SLC17A1Q14916 467 aa9.62□□□□□ -0.87
RNF4-218ENST00000513284 LINGO2Q7L985 606 aa9.62□□□□□ -0.87
RNF4-218ENST00000513284 ADGRG3Q86Y34 549 aa9.62□□□□□ -0.87
RNF4-218ENST00000513284 OR4F15Q8NGB8 312 aa9.62□□□□□ -0.87
RNF4-218ENST00000513284 OR51F2Q8NH61 342 aa9.62□□□□□ -0.87
RNF4-218ENST00000513284 PSMA8Q8TAA3 256 aa9.62□□□□□ -0.87
RNF4-218ENST00000513284 EPS8L3Q8TE67 593 aaKnown RBP9.62□□□□□ -0.87
RNF4-218ENST00000513284 SLC25A43Q8WUT9 341 aaPredicted RBP9.62□□□□□ -0.87
RNF4-218ENST00000513284 CKAP2Q8WWK9 683 aa9.62□□□□□ -0.87
RNF4-218ENST00000513284 OIT3Q8WWZ8 545 aa9.62□□□□□ -0.87
RNF4-218ENST00000513284 ST8SIA1Q92185 356 aa9.62□□□□□ -0.87
RNF4-218ENST00000513284 DUX5Q96PT3 197 aa9.62□□□□□ -0.87
RNF4-218ENST00000513284 CCDC106Q9BWC9 280 aa9.62□□□□□ -0.87
RNF4-218ENST00000513284 LAT2Q9GZY6 243 aa9.62□□□□□ -0.87
RNF4-218ENST00000513284 NELFAQ9H3P2 528 aa9.62□□□□□ -0.87
RNF4-218ENST00000513284 CTPS2Q9NRF8 586 aa9.62□□□□□ -0.87
RNF4-218ENST00000513284 DDX28Q9NUL7 540 aaKnown RBP9.62□□□□□ -0.87
RNF4-218ENST00000513284 ACER3Q9NUN7 267 aa9.62□□□□□ -0.87
RNF4-218ENST00000513284 FBXO9Q9UK97 447 aaPredicted RBP9.62□□□□□ -0.87
RNF4-218ENST00000513284 ARHGAP32A7KAX9 2087 aa9.62□□□□□ -0.87
RNF4-218ENST00000513284 TLDC2A0PJX2 215 aa9.61□□□□□ -0.87
RNF4-218ENST00000513284 POM121CA8CG34 1229 aa9.61□□□□□ -0.87
RNF4-218ENST00000513284 PLPP2O43688 288 aa9.61□□□□□ -0.87
RNF4-218ENST00000513284 STX11O75558 287 aa9.61□□□□□ -0.87
RNF4-218ENST00000513284 CYP7B1O75881 506 aa9.61□□□□□ -0.87
RNF4-218ENST00000513284 C6orf47O95873 294 aa9.61□□□□□ -0.87
RNF4-218ENST00000513284 LGI1O95970 557 aa9.61□□□□□ -0.87
RNF4-218ENST00000513284 CHRNGP07510 517 aa9.61□□□□□ -0.87
RNF4-218ENST00000513284 NUDT17P0C025 328 aa9.61□□□□□ -0.87
RNF4-218ENST00000513284 SAGP10523 405 aaPredicted RBP9.61□□□□□ -0.87
RNF4-218ENST00000513284 TFPIP10646 304 aa9.61□□□□□ -0.87
RNF4-218ENST00000513284 LAMP1P11279 417 aa9.61□□□□□ -0.87
RNF4-218ENST00000513284 IMPDH2P12268 514 aa9.61□□□□□ -0.87
RNF4-218ENST00000513284 TCN1P20061 433 aaPredicted RBP9.61□□□□□ -0.87
RNF4-218ENST00000513284 ALDH3A1P30838 453 aa9.61□□□□□ -0.87
RNF4-218ENST00000513284 MAGEA8P43361 318 aa9.61□□□□□ -0.87
RNF4-218ENST00000513284 OR2B6P58173 313 aa9.61□□□□□ -0.87
RNF4-218ENST00000513284 IFFO1Q0D2I5 559 aa9.61□□□□□ -0.87
RNF4-218ENST00000513284 C3orf36Q3SXR2 165 aa9.61□□□□□ -0.87
RNF4-218ENST00000513284 ATAD3BQ5T9A4 648 aa9.61□□□□□ -0.87
RNF4-218ENST00000513284 IL23RQ5VWK5 629 aa9.61□□□□□ -0.87
RNF4-218ENST00000513284 OLIG3Q7RTU3 272 aa9.61□□□□□ -0.87
RNF4-218ENST00000513284 KIRREL3Q8IZU9 778 aa9.61□□□□□ -0.87
RNF4-218ENST00000513284 VPS37AQ8NEZ2 397 aa9.61□□□□□ -0.87
RNF4-218ENST00000513284 OR7A2PQ8NGA2 310 aa9.61□□□□□ -0.87
RNF4-218ENST00000513284 OR1K1Q8NGR3 316 aa9.61□□□□□ -0.87
RNF4-218ENST00000513284 TUBGCP3Q96CW5 907 aa9.61□□□□□ -0.87
RNF4-218ENST00000513284 COQ8BQ96D53 544 aa9.61□□□□□ -0.87
RNF4-218ENST00000513284 AURKBQ96GD4 344 aaPredicted RBP9.61□□□□□ -0.87
RNF4-218ENST00000513284 ZNF385AQ96PM9 386 aaKnown RBP9.61□□□□□ -0.87
RNF4-218ENST00000513284 OR7D2Q96RA2 312 aa9.61□□□□□ -0.87
RNF4-218ENST00000513284 PKP2Q99959 881 aa9.61□□□□□ -0.87
RNF4-218ENST00000513284 DUSP26Q9BV47 211 aa9.61□□□□□ -0.87
RNF4-218ENST00000513284 NMUR2Q9GZQ4 415 aa9.61□□□□□ -0.87
RNF4-218ENST00000513284 SLITRK2Q9H156 845 aa9.61□□□□□ -0.87
RNF4-218ENST00000513284 OBP2BQ9NPH6 170 aa9.61□□□□□ -0.87
RNF4-218ENST00000513284 PARPBPQ9NWS1 579 aa9.61□□□□□ -0.87
RNF4-218ENST00000513284 PDP1Q9P0J1 537 aaPredicted RBP9.61□□□□□ -0.87
RNF4-218ENST00000513284 WNK2Q9Y3S1 2297 aa9.6□□□□□ -0.87
RNF4-218ENST00000513284 ARPC4-TTLL3A0A0A6YYG9 625 aa9.6□□□□□ -0.87
RNF4-218ENST00000513284 ZNF503-AS2A6NEH8 195 aa9.6□□□□□ -0.87
RNF4-218ENST00000513284 TMEM229AB2RXF0 380 aa9.6□□□□□ -0.87
RNF4-218ENST00000513284 ANKRD28O15084 1053 aa9.6□□□□□ -0.87
RNF4-218ENST00000513284 DNPH1O43598 174 aa9.6□□□□□ -0.87
RNF4-218ENST00000513284 DEAF1O75398 565 aaPredicted RBP9.6□□□□□ -0.87
RNF4-218ENST00000513284 RP2O75695 350 aa9.6□□□□□ -0.87
RNF4-218ENST00000513284 PRSS23O95084 383 aa9.6□□□□□ -0.87
RNF4-218ENST00000513284 CSTAP01040 98 aa9.6□□□□□ -0.87
RNF4-218ENST00000513284 IGKV3-15P01624 115 aa9.6□□□□□ -0.87
RNF4-218ENST00000513284 ERCC1P07992 297 aaPredicted RBP9.6□□□□□ -0.87
RNF4-218ENST00000513284 MATN1P21941 496 aa9.6□□□□□ -0.87
RNF4-218ENST00000513284 PRTN3P24158 256 aa9.6□□□□□ -0.87
RNF4-218ENST00000513284 SEC24CP53992 1094 aa9.6□□□□□ -0.87
RNF4-218ENST00000513284 TMEM33P57088 247 aa9.6□□□□□ -0.87
RNF4-218ENST00000513284 HPCAP84074 193 aa9.6□□□□□ -0.87
RNF4-218ENST00000513284 MYBPC1Q00872 1141 aa9.6□□□□□ -0.87
RNF4-218ENST00000513284 PTGR1Q14914 329 aa9.6□□□□□ -0.87
RNF4-218ENST00000513284 GPR68Q15743 365 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms