RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 WNT11O96014 354 aa12.88□□□□□ -0.35
CCHCR1-229ENST00000512418 BCHEP06276 602 aa12.88□□□□□ -0.35
CCHCR1-229ENST00000512418 GKN3PP0CG01 181 aa12.88□□□□□ -0.35
CCHCR1-229ENST00000512418 KITP10721 976 aa12.88□□□□□ -0.35
CCHCR1-229ENST00000512418 BMP4P12644 408 aa12.88□□□□□ -0.35
CCHCR1-229ENST00000512418 ETFAP13804 333 aa12.88□□□□□ -0.35
CCHCR1-229ENST00000512418 ACAA2P42765 397 aaKnown RBP12.88□□□□□ -0.35
CCHCR1-229ENST00000512418 CRATP43155 626 aa12.88□□□□□ -0.35
CCHCR1-229ENST00000512418 WDR4P57081 412 aaKnown RBP12.88□□□□□ -0.35
CCHCR1-229ENST00000512418 PRPS1P60891 318 aa12.88□□□□□ -0.35
CCHCR1-229ENST00000512418 SLC25A3Q00325 362 aa12.88□□□□□ -0.35
CCHCR1-229ENST00000512418 ZSWIM7Q19AV6 140 aa12.88□□□□□ -0.35
CCHCR1-229ENST00000512418 ATG16L1Q676U5 607 aa12.88□□□□□ -0.35
CCHCR1-229ENST00000512418 NXNQ6DKJ4 435 aa12.88□□□□□ -0.35
CCHCR1-229ENST00000512418 ABHD12BQ7Z5M8 362 aaPredicted RBP12.88□□□□□ -0.35
CCHCR1-229ENST00000512418 GPAT4Q86UL3 456 aa12.88□□□□□ -0.35
CCHCR1-229ENST00000512418 VRK2Q86Y07 508 aa12.88□□□□□ -0.35
CCHCR1-229ENST00000512418 HIPK1Q86Z02 1210 aa12.88□□□□□ -0.35
CCHCR1-229ENST00000512418 ZIC4Q8N9L1 334 aa12.88□□□□□ -0.35
CCHCR1-229ENST00000512418 OR9K2Q8NGE7 335 aa12.88□□□□□ -0.35
CCHCR1-229ENST00000512418 SPATA3Q8NHX4 192 aa12.88□□□□□ -0.35
CCHCR1-229ENST00000512418 MAELQ96JY0 434 aaKnown RBP12.88□□□□□ -0.35
CCHCR1-229ENST00000512418 ZNF385AQ96PM9 386 aaKnown RBP12.88□□□□□ -0.35
CCHCR1-229ENST00000512418 TAPBPLQ9BX59 468 aa12.88□□□□□ -0.35
CCHCR1-229ENST00000512418 RMND5AQ9H871 391 aa12.88□□□□□ -0.35
CCHCR1-229ENST00000512418 YAE1D1Q9NRH1 226 aa12.88□□□□□ -0.35
CCHCR1-229ENST00000512418 SLC6A13Q9NSD5 602 aa12.88□□□□□ -0.35
CCHCR1-229ENST00000512418 ZNF443Q9Y2A4 671 aaPredicted RBP12.88□□□□□ -0.35
CCHCR1-229ENST00000512418 ATP23Q9Y6H3 246 aa12.88□□□□□ -0.35
CCHCR1-229ENST00000512418 ALPK2Q86TB3 2170 aa12.87□□□□□ -0.35
CCHCR1-229ENST00000512418 A0A096LNT2 108 aa12.87□□□□□ -0.35
CCHCR1-229ENST00000512418 A0A096LPI6 279 aa12.87□□□□□ -0.35
CCHCR1-229ENST00000512418 TMEM247A6NEH6 219 aa12.87□□□□□ -0.35
CCHCR1-229ENST00000512418 ELOA3DA6NLF2 546 aaPredicted RBP12.87□□□□□ -0.35
CCHCR1-229ENST00000512418 A8MVM7 634 aa12.87□□□□□ -0.35
CCHCR1-229ENST00000512418 TFPTP0C1Z6 253 aa12.87□□□□□ -0.35
CCHCR1-229ENST00000512418 DSTNP60981 165 aa12.87□□□□□ -0.35
CCHCR1-229ENST00000512418 CHRNB3Q05901 458 aa12.87□□□□□ -0.35
CCHCR1-229ENST00000512418 LARS2Q15031 903 aaKnown RBP12.87□□□□□ -0.35
CCHCR1-229ENST00000512418 ELOA3BQ3SY89 546 aa12.87□□□□□ -0.35
CCHCR1-229ENST00000512418 TMEM225Q6GV28 225 aa12.87□□□□□ -0.35
CCHCR1-229ENST00000512418 MSANTD1Q6ZTZ1 278 aa12.87□□□□□ -0.35
CCHCR1-229ENST00000512418 CADM2Q8N3J6 435 aa12.87□□□□□ -0.35
CCHCR1-229ENST00000512418 ZNF525Q8N782 197 aa12.87□□□□□ -0.35
CCHCR1-229ENST00000512418 ELOA3Q8NG57 546 aa12.87□□□□□ -0.35
CCHCR1-229ENST00000512418 MGARPQ8TDB4 240 aa12.87□□□□□ -0.35
CCHCR1-229ENST00000512418 SLC38A5Q8WUX1 472 aa12.87□□□□□ -0.35
CCHCR1-229ENST00000512418 BOD1Q96IK1 185 aa12.87□□□□□ -0.35
CCHCR1-229ENST00000512418 HEATR1Q9H583 2144 aaKnown RBP12.87□□□□□ -0.35
CCHCR1-229ENST00000512418 ARMC7Q9H6L4 198 aa12.87□□□□□ -0.35
CCHCR1-229ENST00000512418 TPT1P8Q9HAU6 139 aa12.87□□□□□ -0.35
CCHCR1-229ENST00000512418 CACYBPQ9HB71 228 aaKnown RBP12.87□□□□□ -0.35
CCHCR1-229ENST00000512418 OBP2BQ9NPH6 170 aa12.87□□□□□ -0.35
CCHCR1-229ENST00000512418 SDR39U1Q9NRG7 319 aaPredicted RBP12.87□□□□□ -0.35
CCHCR1-229ENST00000512418 ADPRHL2Q9NX46 363 aa12.87□□□□□ -0.35
CCHCR1-229ENST00000512418 THUMPD1Q9NXG2 353 aaKnown RBP12.87□□□□□ -0.35
CCHCR1-229ENST00000512418 ZIM2Q9NZV7 527 aa12.87□□□□□ -0.35
CCHCR1-229ENST00000512418 CUBNO60494 3623 aa12.87□□□□□ -0.35
CCHCR1-229ENST00000512418 A8MV72 311 aaPredicted RBP12.86□□□□□ -0.35
CCHCR1-229ENST00000512418 ATP6V1G2-DDX39BF2Z307 99 aa12.86□□□□□ -0.35
CCHCR1-229ENST00000512418 FRS3O43559 492 aa12.86□□□□□ -0.35
CCHCR1-229ENST00000512418 GPRIN2O60269 458 aa12.86□□□□□ -0.35
CCHCR1-229ENST00000512418 KRT33AO76009 404 aa12.86□□□□□ -0.35
CCHCR1-229ENST00000512418 VAMP5O95183 116 aa12.86□□□□□ -0.35
CCHCR1-229ENST00000512418 IFNA2P01563 188 aa12.86□□□□□ -0.35
CCHCR1-229ENST00000512418 CSF3P09919 207 aa12.86□□□□□ -0.35
CCHCR1-229ENST00000512418 SLC25A16P16260 332 aa12.86□□□□□ -0.35
CCHCR1-229ENST00000512418 CDH2P19022 906 aaPredicted RBP12.86□□□□□ -0.35
CCHCR1-229ENST00000512418 NCF2P19878 526 aaPredicted RBP12.86□□□□□ -0.35
CCHCR1-229ENST00000512418 APOBEC3AP31941 199 aaPredicted RBP12.86□□□□□ -0.35
CCHCR1-229ENST00000512418 P2RY4P51582 365 aa12.86□□□□□ -0.35
CCHCR1-229ENST00000512418 SLC18A1P54219 525 aa12.86□□□□□ -0.35
CCHCR1-229ENST00000512418 LOXL1Q08397 574 aaPredicted RBP12.86□□□□□ -0.35
CCHCR1-229ENST00000512418 BNIP2Q12982 314 aa12.86□□□□□ -0.35
CCHCR1-229ENST00000512418 TMEM249Q2WGJ8 235 aa12.86□□□□□ -0.35
CCHCR1-229ENST00000512418 SLC9B1Q4ZJI4 515 aa12.86□□□□□ -0.35
CCHCR1-229ENST00000512418 C6orf52Q5T4I8 152 aa12.86□□□□□ -0.35
CCHCR1-229ENST00000512418 C1orf140Q5VVS0 124 aa12.86□□□□□ -0.35
CCHCR1-229ENST00000512418 HMBOX1Q6NT76 420 aa12.86□□□□□ -0.35
CCHCR1-229ENST00000512418 PODNL1Q6PEZ8 512 aa12.86□□□□□ -0.35
CCHCR1-229ENST00000512418 FAM168AQ92567 244 aa12.86□□□□□ -0.35
CCHCR1-229ENST00000512418 HTRA1Q92743 480 aa12.86□□□□□ -0.35
CCHCR1-229ENST00000512418 TMEM19Q96HH6 336 aa12.86□□□□□ -0.35
CCHCR1-229ENST00000512418 ITCHQ96J02 903 aa12.86□□□□□ -0.35
CCHCR1-229ENST00000512418 TNFRSF13CQ96RJ3 184 aa12.86□□□□□ -0.35
CCHCR1-229ENST00000512418 ZNF232Q9UNY5 417 aa12.86□□□□□ -0.35
CCHCR1-229ENST00000512418 PMF1-BGLAPU3KQ54 211 aa12.86□□□□□ -0.35
CCHCR1-229ENST00000512418 RTTNQ86VV8 2226 aa12.86□□□□□ -0.35
CCHCR1-229ENST00000512418 A0A0G2JPF8 293 aa12.85□□□□□ -0.35
CCHCR1-229ENST00000512418 OR6C65A6NJZ3 312 aa12.85□□□□□ -0.35
CCHCR1-229ENST00000512418 HNRNPCL2B2RXH8 293 aa12.85□□□□□ -0.35
CCHCR1-229ENST00000512418 HNRNPCL3B7ZW38 293 aa12.85□□□□□ -0.35
CCHCR1-229ENST00000512418 ZNF587BE7ETH6 402 aa12.85□□□□□ -0.35
CCHCR1-229ENST00000512418 HNRNPCL1O60812 293 aaKnown RBP12.85□□□□□ -0.35
CCHCR1-229ENST00000512418 NPIPB7O75200 414 aa12.85□□□□□ -0.35
CCHCR1-229ENST00000512418 HNRNPCL4P0DMR1 293 aa12.85□□□□□ -0.35
CCHCR1-229ENST00000512418 PRG2P13727 222 aa12.85□□□□□ -0.35
CCHCR1-229ENST00000512418 PAX7P23759 505 aa12.85□□□□□ -0.35
CCHCR1-229ENST00000512418 EFNA4P52798 201 aa12.85□□□□□ -0.35
CCHCR1-229ENST00000512418 VLDLRP98155 873 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms