RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 PPM1BO75688 479 aa9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 ZFAND5O76080 213 aa9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 OR6B1O95007 311 aa9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 CSTAP01040 98 aa9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 GASTP01350 101 aa9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 THY1P04216 161 aa9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 SMIM18P0DKX4 95 aa9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 HTR2AP28223 471 aa9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 ABCD3P28288 659 aa9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 UQCRC1P31930 480 aa9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 KRT20P35900 424 aa9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 YAP1P46937 504 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 OMPP47874 163 aa9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 HLCSP50747 726 aa9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 NR0B1P51843 470 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 CRISP1P54107 249 aa9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 SUMO3P55854 103 aaPredicted RBP9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 SKP2Q13309 424 aa9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 OR1Q1Q15612 314 aa9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 EMC4Q5J8M3 183 aa9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 FGD3Q5JSP0 725 aa9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 Q5PR19 223 aa9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 ULK3Q6PHR2 472 aa9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 KLHL17Q6TDP4 642 aa9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 RASSF6Q6ZTQ3 369 aa9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 TMPRSS11FQ6ZWK6 438 aa9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 ZER1Q7Z7L7 766 aa9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 P3H2Q8IVL5 708 aa9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 OR9Q2Q8NGE9 314 aa9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 OR5M9Q8NGP3 310 aa9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 OR52J3Q8NH60 311 aa9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 PIGXQ8TBF5 258 aa9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 GNPDA2Q8TDQ7 276 aa9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 CNOT9Q92600 299 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 NTNG2Q96CW9 530 aa9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 NIPSNAP1Q9BPW8 284 aa9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 MRPS26Q9BYN8 205 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 SLC25A19Q9HC21 320 aa9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 GMPPBQ9Y5P6 360 aa9.47□□□□□ -0.89
PDLIM5-217ENST00000512274 A0A0G2JNJ9 132 aa9.46□□□□□ -0.9
PDLIM5-217ENST00000512274 CLDN24A6NM45 220 aa9.46□□□□□ -0.9
PDLIM5-217ENST00000512274 MITFO75030 526 aaPredicted RBP9.46□□□□□ -0.9
PDLIM5-217ENST00000512274 SLC25A12O75746 678 aa9.46□□□□□ -0.9
PDLIM5-217ENST00000512274 NEURL1O76050 574 aa9.46□□□□□ -0.9
PDLIM5-217ENST00000512274 UTS2O95399 124 aa9.46□□□□□ -0.9
PDLIM5-217ENST00000512274 TP53P04637 393 aaPredicted RBP9.46□□□□□ -0.9
PDLIM5-217ENST00000512274 UBL4AP11441 157 aa9.46□□□□□ -0.9
PDLIM5-217ENST00000512274 GABRB1P18505 474 aa9.46□□□□□ -0.9
PDLIM5-217ENST00000512274 CD53P19397 219 aa9.46□□□□□ -0.9
PDLIM5-217ENST00000512274 IL12BP29460 328 aa9.46□□□□□ -0.9
PDLIM5-217ENST00000512274 RPP38P78345 283 aaKnown RBP9.46□□□□□ -0.9
PDLIM5-217ENST00000512274 PRKCDQ05655 676 aa9.46□□□□□ -0.9
PDLIM5-217ENST00000512274 CD47Q08722 323 aa9.46□□□□□ -0.9
PDLIM5-217ENST00000512274 PLCXD2Q0VAA5 305 aa9.46□□□□□ -0.9
PDLIM5-217ENST00000512274 LAPTM4AQ15012 233 aa9.46□□□□□ -0.9
PDLIM5-217ENST00000512274 TMEM201Q5SNT2 666 aa9.46□□□□□ -0.9
PDLIM5-217ENST00000512274 C6orf141Q5SZD1 244 aa9.46□□□□□ -0.9
PDLIM5-217ENST00000512274 ZNF468Q5VIY5 522 aaPredicted RBP9.46□□□□□ -0.9
PDLIM5-217ENST00000512274 SLX4IPQ5VYV7 408 aa9.46□□□□□ -0.9
PDLIM5-217ENST00000512274 ANKRD34AQ69YU3 496 aa9.46□□□□□ -0.9
PDLIM5-217ENST00000512274 C12orf73Q69YU5 71 aa9.46□□□□□ -0.9
PDLIM5-217ENST00000512274 RPL13AP3Q6NVV1 102 aa9.46□□□□□ -0.9
PDLIM5-217ENST00000512274 H3F3CQ6NXT2 135 aa9.46□□□□□ -0.9
PDLIM5-217ENST00000512274 TTC33Q6PID6 262 aaPredicted RBP9.46□□□□□ -0.9
PDLIM5-217ENST00000512274 LYPD8Q6UX82 237 aa9.46□□□□□ -0.9
PDLIM5-217ENST00000512274 POGLUT1Q8NBL1 392 aa9.46□□□□□ -0.9
PDLIM5-217ENST00000512274 RHOXF1Q8NHV9 184 aa9.46□□□□□ -0.9
PDLIM5-217ENST00000512274 LIPHQ8WWY8 451 aa9.46□□□□□ -0.9
PDLIM5-217ENST00000512274 TMEM158Q8WZ71 300 aa9.46□□□□□ -0.9
PDLIM5-217ENST00000512274 OMA1Q96E52 524 aa9.46□□□□□ -0.9
PDLIM5-217ENST00000512274 CCNB1IP1Q9NPC3 277 aa9.46□□□□□ -0.9
PDLIM5-217ENST00000512274 IL20Q9NYY1 176 aa9.46□□□□□ -0.9
PDLIM5-217ENST00000512274 NDUFA13Q9P0J0 144 aa9.46□□□□□ -0.9
PDLIM5-217ENST00000512274 MYOTQ9UBF9 498 aa9.46□□□□□ -0.9
PDLIM5-217ENST00000512274 Q9UFV3 132 aa9.46□□□□□ -0.9
PDLIM5-217ENST00000512274 ICAM5Q9UMF0 924 aa9.46□□□□□ -0.9
PDLIM5-217ENST00000512274 PCDHGB1Q9Y5G3 927 aa9.46□□□□□ -0.9
PDLIM5-217ENST00000512274 NPFFR2Q9Y5X5 522 aa9.46□□□□□ -0.9
PDLIM5-217ENST00000512274 MPDZO75970 2070 aa9.46□□□□□ -0.9
PDLIM5-217ENST00000512274 COL6A5A8TX70 2615 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 A0A087WUJ7 227 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 A0A087WXM4 84 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 A0A1B0GWA3 101 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 SH3D21A4FU49 640 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 TRIM64BA6NI03 449 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 CPSF4LA6NMK7 179 aaKnown RBP9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 NPIPA2E9PIF3 369 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 NPIPA3F8WFD2 350 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 ZNF264O43296 627 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 FBXO45P0C2W1 286 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 UBTFL6P0CB48 400 aaPredicted RBP9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 PNMTP11086 282 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 CYP4B1P13584 511 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 PRG2P13727 222 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 HPGDP15428 266 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 FUT4P22083 530 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 CHMP24386 653 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 CRHBPP24387 322 aa9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 POLR2IP36954 125 aaKnown RBP9.45□□□□□ -0.9
PDLIM5-217ENST00000512274 RPL5P46777 297 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms