RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 RAB6CQ9H0N0 254 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 FAM124BQ9H5Z6 455 aaPredicted RBP4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 DDX31Q9H8H2 851 aaKnown RBP4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 HRASLSQ9HDD0 168 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 DDIT4Q9NX09 232 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 CCDC59Q9P031 241 aaKnown RBP4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 PAK5Q9P286 719 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 NDRG3Q9UGV2 375 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 KCNG2Q9UJ96 466 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 TFR2Q9UP52 801 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 SORCS3Q9UPU3 1222 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 MRPS17Q9Y2R5 130 aaKnown RBP4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 NUBP2Q9Y5Y2 271 aa4.6□□□□□ -1.67
TRAPPC11-208ENST00000511955 MYO16Q9Y6X6 1858 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 DNAH14Q0VDD8 3507 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 TMEM129A0AVI4 362 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 FAM92AA1XBS5 289 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 SHISA8B8ZZ34 492 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 USP17L23D6RBM5 183 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 DFFAO00273 331 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 NUAK1O60285 661 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 UTS2O95399 124 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 ETHE1O95571 254 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 CYB5R3P00387 301 aaPredicted RBP4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 GOT2P00505 430 aaKnown RBP4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 CD5P06127 495 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 STOMP27105 288 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 ACADLP28330 430 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 RBM34P42696 430 aaKnown RBP4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 IDH2P48735 452 aaKnown RBP4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 DNA2P51530 1060 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 TAS2R50P59544 299 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 POLR2LP62875 67 aaKnown RBP4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 BLOC1S1P78537 153 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 RAB31Q13636 194 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 TRIP13Q15645 432 aaPredicted RBP4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 EFNB3Q15768 340 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 ACKR1Q16570 336 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 TATDN3Q17R31 274 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 VPS26BQ4G0F5 336 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 AGKQ53H12 422 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 PAN3Q58A45 887 aaKnown RBP4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 HP1BP3Q5SSJ5 553 aaPredicted RBP4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 ULK3Q6PHR2 472 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 C16orf89Q6UX73 402 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 IL17RELQ6ZVW7 336 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 ABHD13Q7L211 337 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 ZC3HC1Q86WB0 502 aaKnown RBP4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 XYLT1Q86Y38 959 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 HPS6Q86YV9 775 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 NAXDQ8IW45 347 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 CATSPER1Q8NEC5 780 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 OR10Q1Q8NGQ4 319 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 OR2L2Q8NH16 312 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 MBD3L2Q8NHZ7 208 aaPredicted RBP4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 JOSD2Q8TAC2 188 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 TMEM171Q8WVE6 324 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 TMEM239Q8WW34 195 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 ELSPBP1Q96BH3 223 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 ZG16BQ96DA0 208 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 PRAP1Q96NZ9 151 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 TNFRSF13CQ96RJ3 184 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 TRMOQ9BU70 441 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 SLC19A3Q9BZV2 496 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 ACTR6Q9GZN1 396 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 TKTL2Q9H0I9 626 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 MFSD1Q9H3U5 465 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 RHOFQ9HBH0 211 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 POPDC2Q9HBU9 364 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 KRCC1Q9NPI7 259 aaPredicted RBP4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 RAD18Q9NS91 495 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 PLEKHJ1Q9NW61 149 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 SMOXQ9NWM0 555 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 DUS2Q9NX74 493 aaKnown RBP4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 MGAT4AQ9UM21 535 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 COA3Q9Y2R0 106 aaPredicted RBP4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 CEPT1Q9Y6K0 416 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 ZNF638Q14966 1978 aaKnown RBP4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 F5P12259 2224 aa4.59□□□□□ -1.67
TRAPPC11-208ENST00000511955 LAMA1P25391 3075 aa4.59□□□□□ -1.68
TRAPPC11-208ENST00000511955 A0A1W2PQJ5 194 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 ANTXRLA6NF34 631 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 A6NIZ1 184 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 ANHXE9PGG2 379 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 TMPRSS2O15393 492 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 ITM2AO43736 263 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 CREG1O75629 220 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 LSM8O95777 96 aaKnown RBP4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 KLK3P07288 261 aaPredicted RBP4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 FURINP09958 794 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 ZDHHC11BP0C7U3 371 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 UNGP13051 313 aaPredicted RBP4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 PRF1P14222 555 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 CD36P16671 472 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 CDAP32320 146 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 TALDO1P37837 337 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 TPTEP56180 551 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 SORDQ00796 357 aa4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 SRSF1Q07955 248 aaKnown RBP eCLIP4.58□□□□□ -1.68
TRAPPC11-208ENST00000511955 DLG1Q12959 904 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms