RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 OR1J4Q8NGS1 313 aa13.77□□□□□ -0.21
SCLT1-209ENST00000511426 OR5J2Q8NH18 312 aa13.77□□□□□ -0.21
SCLT1-209ENST00000511426 FAR1Q8WVX9 515 aa13.77□□□□□ -0.21
SCLT1-209ENST00000511426 TAAR8Q969N4 342 aa13.77□□□□□ -0.21
SCLT1-209ENST00000511426 KLHDC3Q9BQ90 382 aa13.77□□□□□ -0.21
SCLT1-209ENST00000511426 BCL7BQ9BQE9 202 aa13.77□□□□□ -0.21
SCLT1-209ENST00000511426 PTDSS2Q9BVG9 487 aa13.77□□□□□ -0.21
SCLT1-209ENST00000511426 ASPNQ9BXN1 380 aa13.77□□□□□ -0.21
SCLT1-209ENST00000511426 FGF20Q9NP95 211 aaPredicted RBP13.77□□□□□ -0.21
SCLT1-209ENST00000511426 TIMMDC1Q9NPL8 285 aa13.77□□□□□ -0.21
SCLT1-209ENST00000511426 MRPL39Q9NYK5 338 aaKnown RBP13.77□□□□□ -0.21
SCLT1-209ENST00000511426 WARS2Q9UGM6 360 aaKnown RBP13.77□□□□□ -0.21
SCLT1-209ENST00000511426 DIMT1Q9UNQ2 313 aaKnown RBP13.77□□□□□ -0.21
SCLT1-209ENST00000511426 MRPS18CQ9Y3D5 142 aaKnown RBP13.77□□□□□ -0.21
SCLT1-209ENST00000511426 MRPS18BQ9Y676 258 aaKnown RBP13.77□□□□□ -0.21
SCLT1-209ENST00000511426 HEATR5AQ86XA9 2040 aa13.77□□□□□ -0.21
SCLT1-209ENST00000511426 NPIPB13A6NJU9 1138 aa13.76□□□□□ -0.21
SCLT1-209ENST00000511426 C17orf51A8MQB3 221 aa13.76□□□□□ -0.21
SCLT1-209ENST00000511426 NPIPB4C9JG80 1138 aa13.76□□□□□ -0.21
SCLT1-209ENST00000511426 PRR23D1E9PI22 279 aaPredicted RBP13.76□□□□□ -0.21
SCLT1-209ENST00000511426 PPP1R3DO95685 299 aa13.76□□□□□ -0.21
SCLT1-209ENST00000511426 FADS2O95864 444 aaKnown RBP13.76□□□□□ -0.21
SCLT1-209ENST00000511426 PRR23D2P0DMB1 279 aaPredicted RBP13.76□□□□□ -0.21
SCLT1-209ENST00000511426 LIFP15018 202 aa13.76□□□□□ -0.21
SCLT1-209ENST00000511426 RPS5P46782 204 aaKnown RBP13.76□□□□□ -0.21
SCLT1-209ENST00000511426 ST13P50502 369 aaKnown RBP13.76□□□□□ -0.21
SCLT1-209ENST00000511426 SH3BGRP55822 239 aaPredicted RBP13.76□□□□□ -0.21
SCLT1-209ENST00000511426 POU4F2Q12837 409 aa13.76□□□□□ -0.21
SCLT1-209ENST00000511426 CAMK2BQ13554 666 aa13.76□□□□□ -0.21
SCLT1-209ENST00000511426 OR5M10Q6IEU7 315 aa13.76□□□□□ -0.21
SCLT1-209ENST00000511426 ARSKQ6UWY0 536 aa13.76□□□□□ -0.21
SCLT1-209ENST00000511426 CCDC81Q6ZN84 652 aa13.76□□□□□ -0.21
SCLT1-209ENST00000511426 SIRT6Q8N6T7 355 aa13.76□□□□□ -0.21
SCLT1-209ENST00000511426 LRRC75AQ8NAA5 344 aa13.76□□□□□ -0.21
SCLT1-209ENST00000511426 PSD4Q8NDX1 1056 aa13.76□□□□□ -0.21
SCLT1-209ENST00000511426 SGCDQ92629 289 aa13.76□□□□□ -0.21
SCLT1-209ENST00000511426 MOGAT1Q96PD6 335 aa13.76□□□□□ -0.21
SCLT1-209ENST00000511426 ERMAPQ96PL5 475 aaPredicted RBP13.76□□□□□ -0.21
SCLT1-209ENST00000511426 SNX18Q96RF0 628 aa13.76□□□□□ -0.21
SCLT1-209ENST00000511426 JAM3Q9BX67 310 aa13.76□□□□□ -0.21
SCLT1-209ENST00000511426 PROK2Q9HC23 129 aa13.76□□□□□ -0.21
SCLT1-209ENST00000511426 AMBNQ9NP70 447 aa13.76□□□□□ -0.21
SCLT1-209ENST00000511426 FANCFQ9NPI8 374 aa13.76□□□□□ -0.21
SCLT1-209ENST00000511426 HINT3Q9NQE9 182 aaKnown RBP13.76□□□□□ -0.21
SCLT1-209ENST00000511426 HAO2Q9NYQ3 351 aa13.76□□□□□ -0.21
SCLT1-209ENST00000511426 STMN3Q9NZ72 180 aa13.76□□□□□ -0.21
SCLT1-209ENST00000511426 B4DXG7 233 aa13.75□□□□□ -0.21
SCLT1-209ENST00000511426 GMFGO60234 142 aa13.75□□□□□ -0.21
SCLT1-209ENST00000511426 TRIM3O75382 744 aaPredicted RBP13.75□□□□□ -0.21
SCLT1-209ENST00000511426 RAB36O95755 333 aa13.75□□□□□ -0.21
SCLT1-209ENST00000511426 STSP08842 583 aa13.75□□□□□ -0.21
SCLT1-209ENST00000511426 ITGA3P26006 1051 aa13.75□□□□□ -0.21
SCLT1-209ENST00000511426 SDHAP31040 664 aa13.75□□□□□ -0.21
SCLT1-209ENST00000511426 PRAMEF20Q5VT98 475 aa13.75□□□□□ -0.21
SCLT1-209ENST00000511426 FOXB2Q5VYV0 432 aa13.75□□□□□ -0.21
SCLT1-209ENST00000511426 ZNF367Q7RTV3 350 aa13.75□□□□□ -0.21
SCLT1-209ENST00000511426 BEST3Q8N1M1 668 aa13.75□□□□□ -0.21
SCLT1-209ENST00000511426 LRRC17Q8N6Y2 441 aa13.75□□□□□ -0.21
SCLT1-209ENST00000511426 ADPRHL1Q8NDY3 354 aa13.75□□□□□ -0.21
SCLT1-209ENST00000511426 UTP23Q9BRU9 249 aaKnown RBP13.75□□□□□ -0.21
SCLT1-209ENST00000511426 RHNO1Q9BSD3 238 aa13.75□□□□□ -0.21
SCLT1-209ENST00000511426 RNF32Q9H0A6 362 aa13.75□□□□□ -0.21
SCLT1-209ENST00000511426 ENKD1Q9H0I2 346 aa13.75□□□□□ -0.21
SCLT1-209ENST00000511426 IL20RAQ9UHF4 553 aa13.75□□□□□ -0.21
SCLT1-209ENST00000511426 VDAC3Q9Y277 283 aa13.75□□□□□ -0.21
SCLT1-209ENST00000511426 ERGIC3Q9Y282 383 aa13.75□□□□□ -0.21
SCLT1-209ENST00000511426 GPR52Q9Y2T5 361 aa13.75□□□□□ -0.21
SCLT1-209ENST00000511426 EXOSC1Q9Y3B2 195 aaKnown RBP13.75□□□□□ -0.21
SCLT1-209ENST00000511426 HDGFL3Q9Y3E1 203 aa13.75□□□□□ -0.21
SCLT1-209ENST00000511426 CEPT1Q9Y6K0 416 aa13.75□□□□□ -0.21
SCLT1-209ENST00000511426 C2orf72A6NCS6 295 aa13.75□□□□□ -0.21
SCLT1-209ENST00000511426 MCIDASD6RGH6 385 aa13.75□□□□□ -0.21
SCLT1-209ENST00000511426 FTCDNL1E5RQL4 147 aa13.75□□□□□ -0.21
SCLT1-209ENST00000511426 NOL3O60936 208 aaKnown RBP13.75□□□□□ -0.21
SCLT1-209ENST00000511426 ACVR2AP27037 513 aa13.75□□□□□ -0.21
SCLT1-209ENST00000511426 GTF2E2P29084 291 aaKnown RBP13.75□□□□□ -0.21
SCLT1-209ENST00000511426 C21orf33P30042 268 aaPredicted RBP13.75□□□□□ -0.21
SCLT1-209ENST00000511426 SRD5A2P31213 254 aa13.75□□□□□ -0.21
SCLT1-209ENST00000511426 IDUAP35475 653 aa13.75□□□□□ -0.21
SCLT1-209ENST00000511426 TMBIM6P55061 237 aa13.75□□□□□ -0.21
SCLT1-209ENST00000511426 LTBQ06643 244 aa13.75□□□□□ -0.21
SCLT1-209ENST00000511426 PIGFQ07326 219 aa13.75□□□□□ -0.21
SCLT1-209ENST00000511426 LGALS3BPQ08380 585 aa13.75□□□□□ -0.21
SCLT1-209ENST00000511426 ZP4Q12836 540 aa13.75□□□□□ -0.21
SCLT1-209ENST00000511426 ITGADQ13349 1161 aa13.75□□□□□ -0.21
SCLT1-209ENST00000511426 SLC35D3Q5M8T2 416 aa13.75□□□□□ -0.21
SCLT1-209ENST00000511426 ZNF362Q5T0B9 420 aaPredicted RBP13.75□□□□□ -0.21
SCLT1-209ENST00000511426 B3GNTL1Q67FW5 361 aaPredicted RBP13.75□□□□□ -0.21
SCLT1-209ENST00000511426 NIPAL3Q6P499 406 aa13.75□□□□□ -0.21
SCLT1-209ENST00000511426 MEPCEQ7L2J0 689 aaKnown RBP13.75□□□□□ -0.21
SCLT1-209ENST00000511426 FAM122BQ7Z309 247 aa13.75□□□□□ -0.21
SCLT1-209ENST00000511426 PROKR2Q8NFJ6 384 aa13.75□□□□□ -0.21
SCLT1-209ENST00000511426 PHOX2BQ99453 314 aa13.75□□□□□ -0.21
SCLT1-209ENST00000511426 TAPBPLQ9BX59 468 aa13.75□□□□□ -0.21
SCLT1-209ENST00000511426 CHCHD3Q9NX63 227 aaKnown RBP13.75□□□□□ -0.21
SCLT1-209ENST00000511426 RSL24D1Q9UHA3 163 aaKnown RBP13.75□□□□□ -0.21
SCLT1-209ENST00000511426 FBXL2Q9UKC9 423 aa13.75□□□□□ -0.21
SCLT1-209ENST00000511426 EXOGQ9Y2C4 368 aaKnown RBP13.75□□□□□ -0.21
SCLT1-209ENST00000511426 ZC3H12DA2A288 527 aaKnown RBP13.74□□□□□ -0.21
SCLT1-209ENST00000511426 LRRN3E7EW58 273 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms