RNA–Protein interactions for RNA: ENST00000511072.5

PRDM16-206, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-206ENST00000511072 COPS3Q9UNS2 423 aa13.21□□□□□ -0.3
PRDM16-206ENST00000511072 NTNG1Q9Y2I2 539 aa13.21□□□□□ -0.3
PRDM16-206ENST00000511072 RNF215Q9Y6U7 377 aa13.21□□□□□ -0.3
PRDM16-206ENST00000511072 DOCK2Q92608 1830 aa13.2□□□□□ -0.3
PRDM16-206ENST00000511072 C2orf72A6NCS6 295 aa13.2□□□□□ -0.3
PRDM16-206ENST00000511072 UPK1AO00322 258 aa13.2□□□□□ -0.3
PRDM16-206ENST00000511072 SLC16A6O15403 523 aa13.2□□□□□ -0.3
PRDM16-206ENST00000511072 SGCEO43556 437 aa13.2□□□□□ -0.3
PRDM16-206ENST00000511072 RPS25P62851 125 aaKnown RBP13.2□□□□□ -0.3
PRDM16-206ENST00000511072 B4GALNT1Q00973 533 aa13.2□□□□□ -0.3
PRDM16-206ENST00000511072 MLLT11Q13015 90 aaPredicted RBP13.2□□□□□ -0.3
PRDM16-206ENST00000511072 CBFBQ13951 182 aa13.2□□□□□ -0.3
PRDM16-206ENST00000511072 TEX261Q6UWH6 196 aa13.2□□□□□ -0.3
PRDM16-206ENST00000511072 RIMKLAQ8IXN7 391 aa13.2□□□□□ -0.3
PRDM16-206ENST00000511072 RHBDD1Q8TEB9 315 aa13.2□□□□□ -0.3
PRDM16-206ENST00000511072 INTS14Q96SY0 518 aa13.2□□□□□ -0.3
PRDM16-206ENST00000511072 PKMYT1Q99640 499 aa13.2□□□□□ -0.3
PRDM16-206ENST00000511072 HDAC8Q9BY41 377 aa13.2□□□□□ -0.3
PRDM16-206ENST00000511072 U3KQ87 197 aa13.2□□□□□ -0.3
PRDM16-206ENST00000511072 SULT2B1O00204 365 aa13.2□□□□□ -0.3
PRDM16-206ENST00000511072 RPS19P39019 145 aaKnown RBP13.2□□□□□ -0.3
PRDM16-206ENST00000511072 LSSP48449 732 aa13.2□□□□□ -0.3
PRDM16-206ENST00000511072 ADPRHP54922 357 aa13.2□□□□□ -0.3
PRDM16-206ENST00000511072 DLX2Q07687 328 aaPredicted RBP13.2□□□□□ -0.3
PRDM16-206ENST00000511072 ILKQ13418 452 aa13.2□□□□□ -0.3
PRDM16-206ENST00000511072 SHEQ5VZ18 495 aa13.2□□□□□ -0.3
PRDM16-206ENST00000511072 DPY19L4Q7Z388 723 aa13.2□□□□□ -0.3
PRDM16-206ENST00000511072 LINC00518Q8N0U6 118 aa13.2□□□□□ -0.3
PRDM16-206ENST00000511072 BEST3Q8N1M1 668 aa13.2□□□□□ -0.3
PRDM16-206ENST00000511072 KDM8Q8N371 416 aa13.2□□□□□ -0.3
PRDM16-206ENST00000511072 CNOT9Q92600 299 aaKnown RBP13.2□□□□□ -0.3
PRDM16-206ENST00000511072 FOLH1BQ9HBA9 442 aa13.2□□□□□ -0.3
PRDM16-206ENST00000511072 SSC5DA1L4H1 1573 aa13.2□□□□□ -0.3
PRDM16-206ENST00000511072 ZNF850A8MQ14 1090 aa13.2□□□□□ -0.3
PRDM16-206ENST00000511072 SYNGR4O95473 234 aa13.2□□□□□ -0.3
PRDM16-206ENST00000511072 GIFP27352 417 aa13.2□□□□□ -0.3
PRDM16-206ENST00000511072 IRF3Q14653 427 aa13.2□□□□□ -0.3
PRDM16-206ENST00000511072 DUSP5Q16690 384 aa13.2□□□□□ -0.3
PRDM16-206ENST00000511072 LRIF1Q5T3J3 769 aa13.2□□□□□ -0.3
PRDM16-206ENST00000511072 KDM4DQ6B0I6 523 aa13.2□□□□□ -0.3
PRDM16-206ENST00000511072 VASNQ6EMK4 673 aa13.2□□□□□ -0.3
PRDM16-206ENST00000511072 CCDC190Q86UF4 302 aa13.2□□□□□ -0.3
PRDM16-206ENST00000511072 GPR137CQ8N3F9 429 aa13.2□□□□□ -0.3
PRDM16-206ENST00000511072 OR6M1Q8NGM8 313 aa13.2□□□□□ -0.3
PRDM16-206ENST00000511072 ELF4Q99607 663 aaPredicted RBP13.2□□□□□ -0.3
PRDM16-206ENST00000511072 RANBP3Q9H6Z4 567 aaPredicted RBP13.2□□□□□ -0.3
PRDM16-206ENST00000511072 ZNF442Q9H7R0 627 aa13.2□□□□□ -0.3
PRDM16-206ENST00000511072 OR2W5A6NFC9 320 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 GABRPO00591 440 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 SRPX2O60687 465 aaPredicted RBP13.19□□□□□ -0.3
PRDM16-206ENST00000511072 LCATP04180 440 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 SHC1P29353 583 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 HSD11B2P80365 405 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 EXOSC2Q13868 293 aaKnown RBP13.19□□□□□ -0.3
PRDM16-206ENST00000511072 AWAT2Q6E213 333 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 EIF5AL1Q6IS14 154 aaKnown RBP13.19□□□□□ -0.3
PRDM16-206ENST00000511072 OR4C15Q8NGM1 316 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 ELP5Q8TE02 316 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 SFXN2Q96NB2 322 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 SPNS1Q9H2V7 528 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 C6orf106Q9H6K1 298 aaPredicted RBP13.19□□□□□ -0.3
PRDM16-206ENST00000511072 SLC6A13Q9NSD5 602 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 PLEK2Q9NYT0 353 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 LAMB1P07942 1786 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 SNRPBP14678 240 aaKnown RBP13.19□□□□□ -0.3
PRDM16-206ENST00000511072 TRIM23P36406 574 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 EPHA5P54756 1037 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 EIF5AP63241 154 aaKnown RBP13.19□□□□□ -0.3
PRDM16-206ENST00000511072 SPOCK1Q08629 439 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 MFSD12Q6NUT3 480 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 CD300LGQ6UXG3 332 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 C19orf47Q8N9M1 422 aaKnown RBP13.19□□□□□ -0.3
PRDM16-206ENST00000511072 SFXN5Q8TD22 340 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 GHSRQ92847 366 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 ZNF285Q96NJ3 590 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 MYADMQ96S97 322 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 DOPEY2Q9Y3R5 2298 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 COL28A1Q2UY09 1125 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 KIAA1958Q8N8K9 716 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 EID2BQ96D98 161 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 SLC5A7Q9GZV3 580 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 FN3KQ9H479 309 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 PCDHGA6Q9Y5G7 932 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 A0A087WUU8 490 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 A0A1B0GV50 99 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 M0R082 166 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 ARPC5O15511 151 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 MRPS14O60783 128 aaKnown RBP13.19□□□□□ -0.3
PRDM16-206ENST00000511072 F10P00742 488 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 KNG1P01042 644 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 TACR3P29371 465 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 GNRHRP30968 328 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 HOXA9P31269 272 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 YPEL5P62699 121 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 C9orf50Q5SZB4 431 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 LAIR2Q6ISS4 152 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 BEND4Q6ZU67 534 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 ZNF100Q8IYN0 542 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 MS4A6EQ96DS6 147 aa13.19□□□□□ -0.3
PRDM16-206ENST00000511072 ZNF768Q9H5H4 540 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms