RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 ELOA3Q8NG57 546 aa12□□□□□ -0.49
SNF8-206ENST00000509989 RNF217Q8TC41 542 aa12□□□□□ -0.49
SNF8-206ENST00000509989 SLC38A4Q969I6 547 aa12□□□□□ -0.49
SNF8-206ENST00000509989 SLC35B4Q969S0 331 aa12□□□□□ -0.49
SNF8-206ENST00000509989 S100PBPQ96BU1 408 aa12□□□□□ -0.49
SNF8-206ENST00000509989 LRRC46Q96FV0 321 aa12□□□□□ -0.49
SNF8-206ENST00000509989 MOGAT1Q96PD6 335 aa12□□□□□ -0.49
SNF8-206ENST00000509989 ARMC7Q9H6L4 198 aa12□□□□□ -0.49
SNF8-206ENST00000509989 CACYBPQ9HB71 228 aaKnown RBP12□□□□□ -0.49
SNF8-206ENST00000509989 GID8Q9NWU2 228 aa12□□□□□ -0.49
SNF8-206ENST00000509989 RPS6KB2Q9UBS0 482 aa12□□□□□ -0.49
SNF8-206ENST00000509989 FLVCR1Q9Y5Y0 555 aa12□□□□□ -0.49
SNF8-206ENST00000509989 PRORSD1PA6NEY8 169 aa11.99□□□□□ -0.49
SNF8-206ENST00000509989 AQP7P3A6NL99 342 aa11.99□□□□□ -0.49
SNF8-206ENST00000509989 LYZL6O75951 148 aa11.99□□□□□ -0.49
SNF8-206ENST00000509989 HPRP00739 348 aa11.99□□□□□ -0.49
SNF8-206ENST00000509989 PLAUP00749 431 aa11.99□□□□□ -0.49
SNF8-206ENST00000509989 NPPAP01160 153 aa11.99□□□□□ -0.49
SNF8-206ENST00000509989 PNMTP11086 282 aa11.99□□□□□ -0.49
SNF8-206ENST00000509989 NCK1P16333 377 aa11.99□□□□□ -0.49
SNF8-206ENST00000509989 GSK3BP49841 420 aa11.99□□□□□ -0.49
SNF8-206ENST00000509989 SLC16A1P53985 500 aa11.99□□□□□ -0.49
SNF8-206ENST00000509989 LRRC23Q53EV4 343 aaPredicted RBP11.99□□□□□ -0.49
SNF8-206ENST00000509989 C9orf135Q5VTT2 229 aa11.99□□□□□ -0.49
SNF8-206ENST00000509989 ALKBH2Q6NS38 261 aa11.99□□□□□ -0.49
SNF8-206ENST00000509989 PAQR6Q6TCH4 344 aa11.99□□□□□ -0.49
SNF8-206ENST00000509989 SEZ6L2Q6UXD5 910 aa11.99□□□□□ -0.49
SNF8-206ENST00000509989 LINC00114Q6XXX2 140 aa11.99□□□□□ -0.49
SNF8-206ENST00000509989 BEND4Q6ZU67 534 aa11.99□□□□□ -0.49
SNF8-206ENST00000509989 GALNT5Q7Z7M9 940 aa11.99□□□□□ -0.49
SNF8-206ENST00000509989 PATL1Q86TB9 770 aaKnown RBP11.99□□□□□ -0.49
SNF8-206ENST00000509989 EPHX4Q8IUS5 362 aa11.99□□□□□ -0.49
SNF8-206ENST00000509989 RNF148Q8N7C7 305 aa11.99□□□□□ -0.49
SNF8-206ENST00000509989 RBM15BQ8NDT2 890 aaKnown RBP11.99□□□□□ -0.49
SNF8-206ENST00000509989 OR2T12Q8NG77 320 aa11.99□□□□□ -0.49
SNF8-206ENST00000509989 DACH2Q96NX9 599 aa11.99□□□□□ -0.49
SNF8-206ENST00000509989 PRSS27Q9BQR3 290 aa11.99□□□□□ -0.49
SNF8-206ENST00000509989 MED18Q9BUE0 208 aa11.99□□□□□ -0.49
SNF8-206ENST00000509989 TRIM2Q9C040 744 aa11.99□□□□□ -0.49
SNF8-206ENST00000509989 ACTR6Q9GZN1 396 aa11.99□□□□□ -0.49
SNF8-206ENST00000509989 CLEC4MQ9H2X3 399 aaPredicted RBP11.99□□□□□ -0.49
SNF8-206ENST00000509989 TESQ9UGI8 421 aaKnown RBP11.99□□□□□ -0.49
SNF8-206ENST00000509989 ITGB1BP2Q9UKP3 347 aa11.99□□□□□ -0.49
SNF8-206ENST00000509989 NOSIPQ9Y314 301 aaKnown RBP11.99□□□□□ -0.49
SNF8-206ENST00000509989 SH3GLB1Q9Y371 365 aa11.99□□□□□ -0.49
SNF8-206ENST00000509989 SNX13Q9Y5W8 968 aa11.99□□□□□ -0.49
SNF8-206ENST00000509989 PRRC2AP48634 2157 aaKnown RBP11.99□□□□□ -0.49
SNF8-206ENST00000509989 DSCAMO60469 2012 aa11.98□□□□□ -0.49
SNF8-206ENST00000509989 A0A087WUJ7 227 aa11.98□□□□□ -0.49
SNF8-206ENST00000509989 A0A1W2PR80 420 aa11.98□□□□□ -0.49
SNF8-206ENST00000509989 KLF4O43474 513 aa11.98□□□□□ -0.49
SNF8-206ENST00000509989 BGLAPP02818 100 aa11.98□□□□□ -0.49
SNF8-206ENST00000509989 GPIP06744 558 aa11.98□□□□□ -0.49
SNF8-206ENST00000509989 HLA-DOBP13765 273 aa11.98□□□□□ -0.49
SNF8-206ENST00000509989 GRPRP30550 384 aa11.98□□□□□ -0.49
SNF8-206ENST00000509989 KDELR2P33947 212 aa11.98□□□□□ -0.49
SNF8-206ENST00000509989 PSME3P61289 254 aa11.98□□□□□ -0.49
SNF8-206ENST00000509989 LSM11P83369 360 aaKnown RBP eCLIP11.98□□□□□ -0.49
SNF8-206ENST00000509989 PDK3Q15120 406 aa11.98□□□□□ -0.49
SNF8-206ENST00000509989 CYBRD1Q53TN4 286 aa11.98□□□□□ -0.49
SNF8-206ENST00000509989 SFRP5Q5T4F7 317 aa11.98□□□□□ -0.49
SNF8-206ENST00000509989 ULK3Q6PHR2 472 aa11.98□□□□□ -0.49
SNF8-206ENST00000509989 LINGO2Q7L985 606 aa11.98□□□□□ -0.49
SNF8-206ENST00000509989 VTCN1Q7Z7D3 282 aa11.98□□□□□ -0.49
SNF8-206ENST00000509989 GPAT4Q86UL3 456 aa11.98□□□□□ -0.49
SNF8-206ENST00000509989 CDH24Q86UP0 819 aa11.98□□□□□ -0.49
SNF8-206ENST00000509989 CARM1Q86X55 608 aa11.98□□□□□ -0.49
SNF8-206ENST00000509989 WFDC8Q8IUA0 241 aa11.98□□□□□ -0.49
SNF8-206ENST00000509989 FAM156AQ8NDB6 213 aa11.98□□□□□ -0.49
SNF8-206ENST00000509989 OR9K2Q8NGE7 335 aa11.98□□□□□ -0.49
SNF8-206ENST00000509989 PIGXQ8TBF5 258 aa11.98□□□□□ -0.49
SNF8-206ENST00000509989 STK35Q8TDR2 534 aa11.98□□□□□ -0.49
SNF8-206ENST00000509989 SLC26A7Q8TE54 656 aa11.98□□□□□ -0.49
SNF8-206ENST00000509989 ZHX1-C8orf76Q96EF9 292 aa11.98□□□□□ -0.49
SNF8-206ENST00000509989 PIK3IP1Q96FE7 263 aa11.98□□□□□ -0.49
SNF8-206ENST00000509989 CCT8L2Q96SF2 557 aa11.98□□□□□ -0.49
SNF8-206ENST00000509989 SH3GL1Q99961 368 aa11.98□□□□□ -0.49
SNF8-206ENST00000509989 PLEKHF2Q9H8W4 249 aa11.98□□□□□ -0.49
SNF8-206ENST00000509989 TMEM27Q9HBJ8 222 aa11.98□□□□□ -0.49
SNF8-206ENST00000509989 GP6Q9HCN6 339 aa11.98□□□□□ -0.49
SNF8-206ENST00000509989 SLC7A10Q9NS82 523 aa11.98□□□□□ -0.49
SNF8-206ENST00000509989 B3GAT1Q9P2W7 334 aa11.98□□□□□ -0.49
SNF8-206ENST00000509989 HEATR1Q9H583 2144 aaKnown RBP11.98□□□□□ -0.49
SNF8-206ENST00000509989 ELOVL7A1L3X0 281 aa11.97□□□□□ -0.49
SNF8-206ENST00000509989 MS4A18H0YCH9 400 aa11.97□□□□□ -0.49
SNF8-206ENST00000509989 M0R082 166 aa11.97□□□□□ -0.49
SNF8-206ENST00000509989 DNPH1O43598 174 aa11.97□□□□□ -0.49
SNF8-206ENST00000509989 FZD7O75084 574 aa11.97□□□□□ -0.49
SNF8-206ENST00000509989 AHSA1O95433 338 aa11.97□□□□□ -0.49
SNF8-206ENST00000509989 C8BP07358 591 aa11.97□□□□□ -0.49
SNF8-206ENST00000509989 ITGA5P08648 1049 aa11.97□□□□□ -0.49
SNF8-206ENST00000509989 PSMB1P20618 241 aaKnown RBP11.97□□□□□ -0.49
SNF8-206ENST00000509989 CRYGSP22914 178 aa11.97□□□□□ -0.49
SNF8-206ENST00000509989 DNAJA1P31689 397 aaKnown RBP11.97□□□□□ -0.49
SNF8-206ENST00000509989 MSX2P35548 267 aaPredicted RBP11.97□□□□□ -0.49
SNF8-206ENST00000509989 PCYT1AP49585 367 aa11.97□□□□□ -0.49
SNF8-206ENST00000509989 SELENOPP49908 381 aa11.97□□□□□ -0.49
SNF8-206ENST00000509989 VEZF1Q14119 521 aa11.97□□□□□ -0.49
SNF8-206ENST00000509989 TAB1Q15750 504 aa11.97□□□□□ -0.49
SNF8-206ENST00000509989 MS4A18Q3C1V0 323 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms