RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 SLC2A8Q9NY64 477 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 ZNF226Q9NYT6 803 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 SPG21Q9NZD8 308 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 IL19Q9UHD0 177 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 FBXO10Q9UK96 956 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 LAMP3Q9UQV4 416 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 ARL2-SNX15V9GYD0 113 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 MON2Q7Z3U7 1717 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 ANKRD26Q9UPS8 1709 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 ZNF816-ZNF321PA0A0X1KG74 233 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 A0A1W2PQ45 241 aaPredicted RBP3.35□□□□□ -1.87
USP53-205ENST00000509769 A0A1W2PQY0 241 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 PLSCR5A0PG75 271 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 SLC9B1P1A6NJY1 282 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 ZNF726A6NNF4 738 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 NCBP2LA6PVI3 153 aaKnown RBP3.35□□□□□ -1.87
USP53-205ENST00000509769 SOX1O00570 391 aaPredicted RBP3.35□□□□□ -1.87
USP53-205ENST00000509769 TGM5O43548 720 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 SCO2O43819 266 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 TNFSF15O95150 251 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 UTS2O95399 124 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 SOX14O95416 240 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 ADRB2P07550 413 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 SPATA31D3P0C874 917 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 DHRS4L1P0CG22 281 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 CD37P11049 281 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 DDTP30046 118 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 CAV2P51636 162 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 ZNF133P52736 654 aaPredicted RBP3.35□□□□□ -1.87
USP53-205ENST00000509769 TAS2R38P59533 333 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 PRPS1P60891 318 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 ADARB1P78563 741 aaKnown RBP3.35□□□□□ -1.87
USP53-205ENST00000509769 MRPS6P82932 125 aaKnown RBP3.35□□□□□ -1.87
USP53-205ENST00000509769 FAM3AP98173 230 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 FABP9Q0Z7S8 132 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 CNN3Q15417 329 aaKnown RBP3.35□□□□□ -1.87
USP53-205ENST00000509769 ST3GAL2Q16842 350 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 ELFN2Q5R3F8 820 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 KCTD11Q693B1 232 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 SLC18B1Q6NT16 456 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 ESPNLQ6ZVH7 1005 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 OVCH1Q7RTY7 1134 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 VASH2Q86V25 355 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 IFNLR1Q8IU57 520 aaPredicted RBP3.35□□□□□ -1.87
USP53-205ENST00000509769 TMEM130Q8N3G9 435 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 OR51A2Q8NGJ7 313 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 OR13C8Q8NGS7 320 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 RHEBL1Q8TAI7 183 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 WDR20Q8TBZ3 569 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 TMEM234Q8WY98 164 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 SLC22A18Q96BI1 424 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 FBXL20Q96IG2 436 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 LCORQ96JN0 433 aaPredicted RBP3.35□□□□□ -1.87
USP53-205ENST00000509769 SLC2A13Q96QE2 648 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 TAAR1Q96RJ0 339 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 RNF2Q99496 336 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 SLC30A3Q99726 388 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 PLA2G12BQ9BX93 195 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 COA1Q9GZY4 146 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 IL21RQ9HBE5 538 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 CISHQ9NSE2 258 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 ZDHHC3Q9NYG2 299 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 FBXW2Q9UKT8 454 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 NRXN2Q9P2S2 1712 aa3.34□□□□□ -1.87
USP53-205ENST00000509769 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.34□□□□□ -1.87
USP53-205ENST00000509769 LOC102723971A0A1B0GUV8 181 aa3.34□□□□□ -1.87
USP53-205ENST00000509769 A0A1W2PPM1 405 aa3.34□□□□□ -1.87
USP53-205ENST00000509769 OR2M5A3KFT3 312 aa3.34□□□□□ -1.87
USP53-205ENST00000509769 OR51F1A6NGY5 319 aa3.34□□□□□ -1.87
USP53-205ENST00000509769 B4E171 279 aa3.34□□□□□ -1.87
USP53-205ENST00000509769 PRRT4C9JH25 899 aa3.34□□□□□ -1.87
USP53-205ENST00000509769 RAB27BO00194 218 aa3.34□□□□□ -1.87
USP53-205ENST00000509769 ARNTLO00327 626 aa3.34□□□□□ -1.87
USP53-205ENST00000509769 CHEK1O14757 476 aa3.34□□□□□ -1.87
USP53-205ENST00000509769 SIGLEC5O15389 551 aa3.34□□□□□ -1.87
USP53-205ENST00000509769 TCF21O43680 179 aa3.34□□□□□ -1.87
USP53-205ENST00000509769 TLX2O43763 284 aaPredicted RBP3.34□□□□□ -1.87
USP53-205ENST00000509769 IL33O95760 270 aa3.34□□□□□ -1.87
USP53-205ENST00000509769 MT-CYBP00156 380 aaPredicted RBP3.34□□□□□ -1.87
USP53-205ENST00000509769 HPNP05981 417 aa3.34□□□□□ -1.87
USP53-205ENST00000509769 ALDOCP09972 364 aaKnown RBP3.34□□□□□ -1.87
USP53-205ENST00000509769 BMP4P12644 408 aa3.34□□□□□ -1.87
USP53-205ENST00000509769 NAGAP17050 411 aa3.34□□□□□ -1.87
USP53-205ENST00000509769 NDUFV2P19404 249 aa3.34□□□□□ -1.87
USP53-205ENST00000509769 AADACP22760 399 aa3.34□□□□□ -1.87
USP53-205ENST00000509769 TEAD1P28347 426 aa3.34□□□□□ -1.87
USP53-205ENST00000509769 SSR2P43308 183 aa3.34□□□□□ -1.87
USP53-205ENST00000509769 TSFMP43897 325 aaKnown RBP3.34□□□□□ -1.87
USP53-205ENST00000509769 AMTP48728 403 aa3.34□□□□□ -1.87
USP53-205ENST00000509769 CSNK1EP49674 416 aaKnown RBP3.34□□□□□ -1.87
USP53-205ENST00000509769 STK19P49842 368 aaPredicted RBP3.34□□□□□ -1.87
USP53-205ENST00000509769 NKX2-5P52952 324 aaPredicted RBP3.34□□□□□ -1.87
USP53-205ENST00000509769 EPHB3P54753 998 aa3.34□□□□□ -1.87
USP53-205ENST00000509769 FAM3BP58499 235 aaPredicted RBP3.34□□□□□ -1.87
USP53-205ENST00000509769 C21orf58P58505 322 aa3.34□□□□□ -1.87
USP53-205ENST00000509769 TUSC3Q13454 348 aa3.34□□□□□ -1.87
USP53-205ENST00000509769 DPYSL2Q16555 572 aa3.34□□□□□ -1.87
USP53-205ENST00000509769 C21orf62-AS1Q17RA5 79 aa3.34□□□□□ -1.87
USP53-205ENST00000509769 SMTNL2Q2TAL5 461 aa3.34□□□□□ -1.87
USP53-205ENST00000509769 C10orf120Q5SQS8 335 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms