RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 TOE1Q96GM8 510 aaKnown RBP16.42■□□□□ 0.22
CCHCR1-228ENST00000509552 TCTN2Q96GX1 697 aa16.42■□□□□ 0.22
CCHCR1-228ENST00000509552 NDEL1Q9GZM8 345 aa16.42■□□□□ 0.22
CCHCR1-228ENST00000509552 STMN3Q9NZ72 180 aa16.42■□□□□ 0.22
CCHCR1-228ENST00000509552 SPATA2Q9UM82 520 aa16.42■□□□□ 0.22
CCHCR1-228ENST00000509552 AK6Q9Y3D8 172 aaKnown RBP16.42■□□□□ 0.22
CCHCR1-228ENST00000509552 ZNF749O43361 778 aa16.42■□□□□ 0.22
CCHCR1-228ENST00000509552 SELENOFO60613 162 aa16.42■□□□□ 0.22
CCHCR1-228ENST00000509552 CD3GP09693 182 aa16.42■□□□□ 0.22
CCHCR1-228ENST00000509552 MAOAP21397 527 aa16.42■□□□□ 0.22
CCHCR1-228ENST00000509552 GRK6P43250 576 aa16.42■□□□□ 0.22
CCHCR1-228ENST00000509552 RPS11P62280 158 aaKnown RBP eCLIP16.42■□□□□ 0.22
CCHCR1-228ENST00000509552 ERVK-25P63136 954 aa16.42■□□□□ 0.22
CCHCR1-228ENST00000509552 FUT7Q11130 342 aa16.42■□□□□ 0.22
CCHCR1-228ENST00000509552 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.42■□□□□ 0.22
CCHCR1-228ENST00000509552 CEP78Q5JTW2 689 aa16.42■□□□□ 0.22
CCHCR1-228ENST00000509552 DEDD2Q8WXF8 326 aa16.42■□□□□ 0.22
CCHCR1-228ENST00000509552 CCNL2Q96S94 520 aaPredicted RBP16.42■□□□□ 0.22
CCHCR1-228ENST00000509552 GAS2L1Q99501 681 aaPredicted RBP16.42■□□□□ 0.22
CCHCR1-228ENST00000509552 NUDT15Q9NV35 164 aa16.42■□□□□ 0.22
CCHCR1-228ENST00000509552 COPZ2Q9P299 210 aa16.42■□□□□ 0.22
CCHCR1-228ENST00000509552 PRODH2Q9UF12 536 aa16.42■□□□□ 0.22
CCHCR1-228ENST00000509552 CAMK2AQ9UQM7 478 aa16.42■□□□□ 0.22
CCHCR1-228ENST00000509552 TRAV6A0A075B6T7 132 aa16.41■□□□□ 0.22
CCHCR1-228ENST00000509552 OR6C68A6NDL8 312 aa16.41■□□□□ 0.22
CCHCR1-228ENST00000509552 ELOA3DA6NLF2 546 aaPredicted RBP16.41■□□□□ 0.22
CCHCR1-228ENST00000509552 C10orf142B7Z368 130 aa16.41■□□□□ 0.22
CCHCR1-228ENST00000509552 OR2B3O76000 313 aa16.41■□□□□ 0.22
CCHCR1-228ENST00000509552 IL10RAQ13651 578 aa16.41■□□□□ 0.22
CCHCR1-228ENST00000509552 BTBD16Q32M84 506 aa16.41■□□□□ 0.22
CCHCR1-228ENST00000509552 ELOA3BQ3SY89 546 aa16.41■□□□□ 0.22
CCHCR1-228ENST00000509552 GXYLT1Q4G148 440 aa16.41■□□□□ 0.22
CCHCR1-228ENST00000509552 PARGQ86W56 976 aa16.41■□□□□ 0.22
CCHCR1-228ENST00000509552 ELOA3Q8NG57 546 aa16.41■□□□□ 0.22
CCHCR1-228ENST00000509552 OR4D9Q8NGE8 314 aa16.41■□□□□ 0.22
CCHCR1-228ENST00000509552 PHF21AQ96BD5 680 aa16.41■□□□□ 0.22
CCHCR1-228ENST00000509552 RASD2Q96D21 266 aa16.41■□□□□ 0.22
CCHCR1-228ENST00000509552 MMABQ96EY8 250 aaPredicted RBP16.41■□□□□ 0.22
CCHCR1-228ENST00000509552 HYLS1Q96M11 299 aa16.41■□□□□ 0.22
CCHCR1-228ENST00000509552 PDCD1LG2Q9BQ51 273 aa16.41■□□□□ 0.22
CCHCR1-228ENST00000509552 COPS3Q9UNS2 423 aa16.41■□□□□ 0.22
CCHCR1-228ENST00000509552 DNAH14Q0VDD8 3507 aa16.41■□□□□ 0.22
CCHCR1-228ENST00000509552 A0A0B4J203 849 aa16.41■□□□□ 0.22
CCHCR1-228ENST00000509552 OR2W5A6NFC9 320 aa16.41■□□□□ 0.22
CCHCR1-228ENST00000509552 PDCD5O14737 125 aa16.41■□□□□ 0.22
CCHCR1-228ENST00000509552 ZNF780AO75290 641 aaPredicted RBP16.41■□□□□ 0.22
CCHCR1-228ENST00000509552 TCRBP04435 133 aa16.41■□□□□ 0.22
CCHCR1-228ENST00000509552 HPGDP15428 266 aa16.41■□□□□ 0.22
CCHCR1-228ENST00000509552 PSMB10P40306 273 aa16.41■□□□□ 0.22
CCHCR1-228ENST00000509552 HSD17B7P56937 341 aa16.41■□□□□ 0.22
CCHCR1-228ENST00000509552 RPS4XP62701 263 aaKnown RBP16.41■□□□□ 0.22
CCHCR1-228ENST00000509552 RNASE12Q5GAN4 147 aaKnown RBP16.41■□□□□ 0.22
CCHCR1-228ENST00000509552 THOC7Q6I9Y2 204 aaKnown RBP16.41■□□□□ 0.22
CCHCR1-228ENST00000509552 ZNRF4Q8WWF5 429 aa16.41■□□□□ 0.22
CCHCR1-228ENST00000509552 KLHDC7BQ96G42 594 aa16.41■□□□□ 0.22
CCHCR1-228ENST00000509552 CMTM3Q96MX0 182 aa16.41■□□□□ 0.22
CCHCR1-228ENST00000509552 DDOQ99489 341 aa16.41■□□□□ 0.22
CCHCR1-228ENST00000509552 MAP3K3Q99759 626 aa16.41■□□□□ 0.22
CCHCR1-228ENST00000509552 C7orf50Q9BRJ6 194 aaKnown RBP16.41■□□□□ 0.22
CCHCR1-228ENST00000509552 NMNAT2Q9BZQ4 307 aa16.41■□□□□ 0.22
CCHCR1-228ENST00000509552 C7orf66A4D0T2 115 aa16.4■□□□□ 0.22
CCHCR1-228ENST00000509552 SMLR1H3BR10 107 aa16.4■□□□□ 0.22
CCHCR1-228ENST00000509552 SERPINI2O75830 405 aa16.4■□□□□ 0.22
CCHCR1-228ENST00000509552 GLCEO94923 617 aa16.4■□□□□ 0.22
CCHCR1-228ENST00000509552 PNMTP11086 282 aa16.4■□□□□ 0.22
CCHCR1-228ENST00000509552 SRMP19623 302 aa16.4■□□□□ 0.22
CCHCR1-228ENST00000509552 STOMP27105 288 aa16.4■□□□□ 0.22
CCHCR1-228ENST00000509552 MAZP56270 477 aaKnown RBP16.4■□□□□ 0.22
CCHCR1-228ENST00000509552 DGCR2P98153 550 aa16.4■□□□□ 0.22
CCHCR1-228ENST00000509552 KLHL26Q53HC5 615 aa16.4■□□□□ 0.22
CCHCR1-228ENST00000509552 UBE2NLQ5JXB2 153 aa16.4■□□□□ 0.22
CCHCR1-228ENST00000509552 WBP2NLQ6ICG8 309 aa16.4■□□□□ 0.22
CCHCR1-228ENST00000509552 LEG1Q6P5S2 330 aa16.4■□□□□ 0.22
CCHCR1-228ENST00000509552 UNQ9370/PRO34162Q6UXP9 181 aa16.4■□□□□ 0.22
CCHCR1-228ENST00000509552 JAZF1Q86VZ6 243 aa16.4■□□□□ 0.22
CCHCR1-228ENST00000509552 SIAH3Q8IW03 269 aa16.4■□□□□ 0.22
CCHCR1-228ENST00000509552 C10orf53Q8N6V4 93 aa16.4■□□□□ 0.22
CCHCR1-228ENST00000509552 ZNF527Q8NB42 609 aa16.4■□□□□ 0.22
CCHCR1-228ENST00000509552 HAVCR2Q8TDQ0 301 aa16.4■□□□□ 0.22
CCHCR1-228ENST00000509552 GPX7Q96SL4 187 aaPredicted RBP16.4■□□□□ 0.22
CCHCR1-228ENST00000509552 GPR174Q9BXC1 333 aa16.4■□□□□ 0.22
CCHCR1-228ENST00000509552 RABL2AQ9UBK7 228 aaPredicted RBP16.4■□□□□ 0.22
CCHCR1-228ENST00000509552 RABL2BQ9UNT1 228 aa16.4■□□□□ 0.22
CCHCR1-228ENST00000509552 CLDN16Q9Y5I7 305 aa16.4■□□□□ 0.22
CCHCR1-228ENST00000509552 ANKRD61A6NGH8 418 aa16.4■□□□□ 0.22
CCHCR1-228ENST00000509552 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.4■□□□□ 0.22
CCHCR1-228ENST00000509552 BLOC1S5-TXNDC5H3BN57 136 aa16.4■□□□□ 0.22
CCHCR1-228ENST00000509552 ALX3O95076 343 aa16.4■□□□□ 0.22
CCHCR1-228ENST00000509552 PPM1FP49593 454 aaPredicted RBP16.4■□□□□ 0.22
CCHCR1-228ENST00000509552 FCN2Q15485 313 aa16.4■□□□□ 0.22
CCHCR1-228ENST00000509552 COL13A1Q5TAT6 717 aaPredicted RBP16.4■□□□□ 0.22
CCHCR1-228ENST00000509552 ZNF615Q8N8J6 731 aa16.4■□□□□ 0.22
CCHCR1-228ENST00000509552 ZPLD1Q8TCW7 415 aa16.4■□□□□ 0.22
CCHCR1-228ENST00000509552 ADAMTS14Q8WXS8 1223 aa16.4■□□□□ 0.22
CCHCR1-228ENST00000509552 SCMH1Q96GD3 660 aa16.4■□□□□ 0.22
CCHCR1-228ENST00000509552 PELOQ9BRX2 385 aaKnown RBP16.4■□□□□ 0.22
CCHCR1-228ENST00000509552 LRRC61Q9BV99 259 aa16.4■□□□□ 0.22
CCHCR1-228ENST00000509552 CACNG6Q9BXT2 260 aa16.4■□□□□ 0.22
CCHCR1-228ENST00000509552 CCDC86Q9H6F5 360 aaKnown RBP16.4■□□□□ 0.22
CCHCR1-228ENST00000509552 NOX4Q9NPH5 578 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms