RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 NPR2P20594 1047 aa8.12□□□□□ -1.11
NEDD9-211ENST00000508546 CALCRP30988 508 aa8.12□□□□□ -1.11
NEDD9-211ENST00000508546 HTR3AP46098 478 aa8.12□□□□□ -1.11
NEDD9-211ENST00000508546 MAP2K6P52564 334 aa8.12□□□□□ -1.11
NEDD9-211ENST00000508546 UBE2NP61088 152 aaKnown RBP8.12□□□□□ -1.11
NEDD9-211ENST00000508546 HGFACQ04756 655 aa8.12□□□□□ -1.11
NEDD9-211ENST00000508546 ADRM1Q16186 407 aa8.12□□□□□ -1.11
NEDD9-211ENST00000508546 SPDYE7PQ495Y7 208 aa8.12□□□□□ -1.11
NEDD9-211ENST00000508546 AWAT1Q58HT5 328 aa8.12□□□□□ -1.11
NEDD9-211ENST00000508546 AGBL2Q5U5Z8 902 aa8.12□□□□□ -1.11
NEDD9-211ENST00000508546 SHQ1Q6PI26 577 aaKnown RBP8.12□□□□□ -1.11
NEDD9-211ENST00000508546 VHLLQ6RSH7 139 aa8.12□□□□□ -1.11
NEDD9-211ENST00000508546 CNPY4Q8N129 248 aa8.12□□□□□ -1.11
NEDD9-211ENST00000508546 ZCCHC24Q8N2G6 241 aaKnown RBP8.12□□□□□ -1.11
NEDD9-211ENST00000508546 TEX29Q8N6K0 151 aa8.12□□□□□ -1.11
NEDD9-211ENST00000508546 ZIC4Q8N9L1 334 aa8.12□□□□□ -1.11
NEDD9-211ENST00000508546 OR5D16Q8NGK9 328 aa8.12□□□□□ -1.11
NEDD9-211ENST00000508546 OR1K1Q8NGR3 316 aa8.12□□□□□ -1.11
NEDD9-211ENST00000508546 COQ8BQ96D53 544 aa8.12□□□□□ -1.11
NEDD9-211ENST00000508546 DNAJA3Q96EY1 480 aa8.12□□□□□ -1.11
NEDD9-211ENST00000508546 ANKRD27Q96NW4 1050 aa8.12□□□□□ -1.11
NEDD9-211ENST00000508546 ROPN1BQ9BZX4 212 aaPredicted RBP8.12□□□□□ -1.11
NEDD9-211ENST00000508546 RACGAP1Q9H0H5 632 aa8.12□□□□□ -1.11
NEDD9-211ENST00000508546 TUBB1Q9H4B7 451 aa8.12□□□□□ -1.11
NEDD9-211ENST00000508546 ROPN1Q9HAT0 212 aaPredicted RBP8.12□□□□□ -1.11
NEDD9-211ENST00000508546 EXOSC3Q9NQT5 275 aaKnown RBP8.12□□□□□ -1.11
NEDD9-211ENST00000508546 ATAD3AQ9NVI7 634 aa8.12□□□□□ -1.11
NEDD9-211ENST00000508546 MKLN1Q9UL63 735 aa8.12□□□□□ -1.11
NEDD9-211ENST00000508546 USP22Q9UPT9 525 aa8.12□□□□□ -1.11
NEDD9-211ENST00000508546 ARHGAP32A7KAX9 2087 aa8.11□□□□□ -1.11
NEDD9-211ENST00000508546 TMED7-TICAM2A0A0A6YYA0 188 aa8.11□□□□□ -1.11
NEDD9-211ENST00000508546 TLDC2A0PJX2 215 aa8.11□□□□□ -1.11
NEDD9-211ENST00000508546 TMEM114B3SHH9 223 aa8.11□□□□□ -1.11
NEDD9-211ENST00000508546 AZIN1O14977 448 aa8.11□□□□□ -1.11
NEDD9-211ENST00000508546 RGS16O15492 202 aaPredicted RBP8.11□□□□□ -1.11
NEDD9-211ENST00000508546 BCAS1O75363 584 aaPredicted RBP8.11□□□□□ -1.11
NEDD9-211ENST00000508546 C6orf47O95873 294 aa8.11□□□□□ -1.11
NEDD9-211ENST00000508546 PROCP04070 461 aa8.11□□□□□ -1.11
NEDD9-211ENST00000508546 EPHA1P21709 976 aa8.11□□□□□ -1.11
NEDD9-211ENST00000508546 MATN1P21941 496 aa8.11□□□□□ -1.11
NEDD9-211ENST00000508546 RYKP34925 604 aa8.11□□□□□ -1.11
NEDD9-211ENST00000508546 THBS4P35443 961 aa8.11□□□□□ -1.11
NEDD9-211ENST00000508546 MAPK14Q16539 360 aa8.11□□□□□ -1.11
NEDD9-211ENST00000508546 LIPMQ5VYY2 423 aa8.11□□□□□ -1.11
NEDD9-211ENST00000508546 AAED1Q7RTV5 226 aa8.11□□□□□ -1.11
NEDD9-211ENST00000508546 SPATA21Q7Z572 469 aa8.11□□□□□ -1.11
NEDD9-211ENST00000508546 SVOPLQ8N434 492 aa8.11□□□□□ -1.11
NEDD9-211ENST00000508546 RIBC1Q8N443 379 aaPredicted RBP8.11□□□□□ -1.11
NEDD9-211ENST00000508546 OR9K2Q8NGE7 335 aa8.11□□□□□ -1.11
NEDD9-211ENST00000508546 CLDND2Q8NHS1 167 aa8.11□□□□□ -1.11
NEDD9-211ENST00000508546 CKAP2Q8WWK9 683 aa8.11□□□□□ -1.11
NEDD9-211ENST00000508546 BCL2L2Q92843 193 aaPredicted RBP8.11□□□□□ -1.11
NEDD9-211ENST00000508546 DDIT4LQ96D03 193 aa8.11□□□□□ -1.11
NEDD9-211ENST00000508546 AURKBQ96GD4 344 aaPredicted RBP8.11□□□□□ -1.11
NEDD9-211ENST00000508546 ZNF385AQ96PM9 386 aaKnown RBP8.11□□□□□ -1.11
NEDD9-211ENST00000508546 LRRC37BQ96QE4 947 aa8.11□□□□□ -1.11
NEDD9-211ENST00000508546 ZNF747Q9BV97 191 aa8.11□□□□□ -1.11
NEDD9-211ENST00000508546 SERHL2Q9H4I8 314 aa8.11□□□□□ -1.11
NEDD9-211ENST00000508546 PPCSQ9HAB8 311 aa8.11□□□□□ -1.11
NEDD9-211ENST00000508546 DYNLRB1Q9NP97 96 aa8.11□□□□□ -1.11
NEDD9-211ENST00000508546 POLE3Q9NRF9 147 aa8.11□□□□□ -1.11
NEDD9-211ENST00000508546 TMED7Q9Y3B3 224 aa8.11□□□□□ -1.11
NEDD9-211ENST00000508546 PCDHGB1Q9Y5G3 927 aa8.11□□□□□ -1.11
NEDD9-211ENST00000508546 DNAJC15Q9Y5T4 150 aa8.11□□□□□ -1.11
NEDD9-211ENST00000508546 TRAV20A0A0B4J274 112 aa8.1□□□□□ -1.11
NEDD9-211ENST00000508546 OR6C65A6NJZ3 312 aa8.1□□□□□ -1.11
NEDD9-211ENST00000508546 ZNF587BE7ETH6 402 aa8.1□□□□□ -1.11
NEDD9-211ENST00000508546 LYNX1G3V0Z9 82 aa8.1□□□□□ -1.11
NEDD9-211ENST00000508546 GLRA3O75311 464 aa8.1□□□□□ -1.11
NEDD9-211ENST00000508546 LYPLA1O75608 230 aaPredicted RBP8.1□□□□□ -1.11
NEDD9-211ENST00000508546 RGS9O75916 674 aaPredicted RBP8.1□□□□□ -1.11
NEDD9-211ENST00000508546 KRT33AO76009 404 aa8.1□□□□□ -1.11
NEDD9-211ENST00000508546 LGI1O95970 557 aa8.1□□□□□ -1.11
NEDD9-211ENST00000508546 CHEK2O96017 543 aa8.1□□□□□ -1.11
NEDD9-211ENST00000508546 LINC00032P0C843 101 aa8.1□□□□□ -1.11
NEDD9-211ENST00000508546 LYNX1P0DP58 116 aa8.1□□□□□ -1.11
NEDD9-211ENST00000508546 MAPK1P28482 360 aa8.1□□□□□ -1.11
NEDD9-211ENST00000508546 IDH2P48735 452 aaKnown RBP8.1□□□□□ -1.11
NEDD9-211ENST00000508546 EVX1P49640 407 aa8.1□□□□□ -1.11
NEDD9-211ENST00000508546 POLR2HP52434 150 aaKnown RBP8.1□□□□□ -1.11
NEDD9-211ENST00000508546 SH3BGRP55822 239 aaPredicted RBP8.1□□□□□ -1.11
NEDD9-211ENST00000508546 RPS26P62854 115 aaKnown RBP8.1□□□□□ -1.11
NEDD9-211ENST00000508546 HBA1P69905 142 aa8.1□□□□□ -1.11
NEDD9-211ENST00000508546 CBX1P83916 185 aa8.1□□□□□ -1.11
NEDD9-211ENST00000508546 IL1RL1Q01638 556 aa8.1□□□□□ -1.11
NEDD9-211ENST00000508546 PLAURQ03405 335 aa8.1□□□□□ -1.11
NEDD9-211ENST00000508546 CCDC153Q494R4 210 aa8.1□□□□□ -1.11
NEDD9-211ENST00000508546 GALNTL6Q49A17 601 aa8.1□□□□□ -1.11
NEDD9-211ENST00000508546 SLC9B1Q4ZJI4 515 aa8.1□□□□□ -1.11
NEDD9-211ENST00000508546 OTUD3Q5T2D3 398 aaPredicted RBP8.1□□□□□ -1.11
NEDD9-211ENST00000508546 SHISA2Q6UWI4 295 aa8.1□□□□□ -1.11
NEDD9-211ENST00000508546 C1orf229Q6ZS94 237 aaPredicted RBP8.1□□□□□ -1.11
NEDD9-211ENST00000508546 OLIG3Q7RTU3 272 aa8.1□□□□□ -1.11
NEDD9-211ENST00000508546 C16orf62Q7Z3J2 963 aa8.1□□□□□ -1.11
NEDD9-211ENST00000508546 C6orf120Q7Z4R8 191 aa8.1□□□□□ -1.11
NEDD9-211ENST00000508546 CDK20Q8IZL9 346 aa8.1□□□□□ -1.11
NEDD9-211ENST00000508546 ARFGAP2Q8N6H7 521 aa8.1□□□□□ -1.11
NEDD9-211ENST00000508546 TMEM99Q8N816 258 aa8.1□□□□□ -1.11
NEDD9-211ENST00000508546 OR51F2Q8NH61 342 aa8.1□□□□□ -1.11
NEDD9-211ENST00000508546 OR5AK3PQ8NH89 298 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms